Ggra5806.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5806.t1
Unique NameGgra5806.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length732
Homology
BLAST of Ggra5806.t1 vs. uniprot
Match: A0A2V3IZB6 (U3 small nucleolar RNA-associated protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZB6_9FLOR)

HSP 1 Score: 650 bits (1676), Expect = 9.410e-223
Identity = 387/748 (51.74%), Postives = 506/748 (67.65%), Query Frame = 0
Query:    3 GDKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLILKRRAKQRELTKLQVERTVDKTAARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIGIRP-----DAEDGD--DQFSA-LNPGENQISGSGGLL--DGNTS-----SGDADSGYESSDEXXXXSARKDTTRQNSQAVMIEMEDKKCPASASEP------ESEQGPGVAEGTDSADQQDSERRTEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESECSSDGNDESRTNTLSFWEGGVPFAVFRNASDRLKLSDIDRAEFWDVAASTPFVPPKLLTHMLIFMKAKYMECCVVQLISIRQPWDIDRTTRKRSLGNKIGEENGEIYLSESDEVALSTHALEVAELLSTAISSTSFARLPDSSVAGVRLLLQNFSEIVNNTCFSKTFEDAVKEILSRFEAHQAQGMFDVEELESGKGASASQQDMKEWTFSKFASLFQESNDGFSASPEVYDALKHKVIVPFRSLEQDRLVCLYLSKENNISQIRSFTKAIMALPPVTMESLKAAINAELRILADSRKNDATMIPQSDQVMVSHTRKLFKLAISLPAAKRDVDLWLSYVDFERSVSGDMREASTVNWKATKVLMPSFQESFTERQTLRNL 729
            GD VEREL  TI VLHAAQ+A +LNR EV+++VRKRRHHEYNLLR++VSR+D+LHYAAFEREL  +L+ RAK+R+LTK+QVERTV+KTAARVNLIYSRAV KFRFD+DLWLHYAKHC++ G+TRAAARVFAKAIAYRNDS+RIWLAAI+FHFD   D TGART+AQRALRALP SV LWKEYFRLELC+LGKLVARRL +G+ P     +A++GD  ++ S   NP E++ +   GL    G+TS       D      +S+      + +  T  N   +  E E    P+ + +       E EQ P     +  AD+ ++     +         XXXXXXXXXXXXXX             +    S G D+     LSFWEGGVPFA+FR+A DR+  S   RAEFWD+AAS PFVPP LL+ M  ++K K+  C VVQ+I+IRQPWD  R  R+RSLG+K+GEE  EI    +D   L  HA +VA+ +  A+ +  F+ L +S   G+R +L +F   V  T  +   + A+++++S  +     GM +    +S +    S ++ K+W+ S   +  +   + FSAS E  +ALK KV+VPFR++EQD LVCLYLSKE +I +IR+F  A++A+PP+TMESL+AAINAELRI   S+   A    Q D+ M+ HTR+LFK A+SL AA+RDV+LWLSY+DFER +SGDMREAS V+WKA+KVLMP++++ FTERQ LR+L
Sbjct:    2 GDNVERELRPTIPVLHAAQKAKILNRWEVNEVVRKRRHHEYNLLRRDVSRSDFLHYAAFERELASVLRNRAKKRQLTKIQVERTVNKTAARVNLIYSRAVSKFRFDDDLWLHYAKHCVRMGATRAAARVFAKAIAYRNDSDRIWLAAISFHFDVCADTTGARTIAQRALRALPNSVTLWKEYFRLELCYLGKLVARRLTLGLSPLPKDPNAKEGDGLNEISQNQNPNESKTANIPGLTLGQGDTSIRQEPEDDRTPSVSNSEHETEKGSDQQATNGNGNGLQNEEETLNHPSDSQDSNQHLSKEIEQLPEPQGSSLDADKHETPNADSIEEGESSESDXXXXXXXXXXXXXXDLEQN--------DGSVKSSGIDK-----LSFWEGGVPFAIFRSACDRISCSHKVRAEFWDIAASIPFVPPMLLSSMFRYLKEKFSGCKVVQVIAIRQPWDTQRAERRRSLGSKLGEEQREINFGPTDRAMLLEHAQKVADQMYAALRTEKFSNLSESENEGIRAVLSSFRRTVFYTGRTDKSKLAMQKLMSSLD-----GMENEAHGKSTEEGEKSSKNGKDWSTSLMRTELKSVEEPFSASTEFVEALKQKVVVPFRNIEQDGLVCLYLSKETDILKIRNFVTAVLAVPPITMESLQAAINAELRIYGLSKSKAAIPSHQKDEFMLHHTRQLFKKAVSLAAARRDVELWLSYIDFERHISGDMREASAVSWKASKVLMPNYRDLFTERQALRSL 731          
BLAST of Ggra5806.t1 vs. uniprot
Match: U3 small nucleolar RNA-associated protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1AD1 (U3 small nucleolar RNA-associated protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1AD1)

HSP 1 Score: 210 bits (535), Expect = 4.220e-59
Identity = 109/201 (54.23%), Postives = 144/201 (71.64%), Query Frame = 0
Query:    3 GDKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLILKRRAKQRELTKLQVERTVDKTAARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIG 203
            GD+VER L+ T+ +L   ++  LL+  EV  +V++RR HEY L R    R+ +L YAAFER+L  +L  R  +R++   +    V + +ARVNL+YSRA++KF+ D+ L+LHY +HCI  GS +AA +V AKAIA+R DSER+WLAAIAFHFD+ GD   AR LAQRALRAL  S  +WKEYFRLEL +L KL+ARRL IG
Sbjct:    2 GDRVERALEETVPLLRIIRKLKLLSEAEVRSVVQQRRDHEYALRRPGAPRSLFLRYAAFERDLIDLLTARLVERKVPDKRARNIVGQQSARVNLVYSRAIRKFKGDDQLYLHYVRHCISAGSRKAAEKVLAKAIAHRGDSERVWLAAIAFHFDSCGDVKVARALAQRALRALKTSNLIWKEYFRLELVYLAKLIARRLTIG 202          
BLAST of Ggra5806.t1 vs. uniprot
Match: A0A1Y2GVG3 (U3 small nucleolar RNA-associated protein 6-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GVG3_9FUNG)

HSP 1 Score: 127 bits (320), Expect = 6.920e-27
Identity = 71/208 (34.13%), Postives = 115/208 (55.29%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLILK-RRAKQRELTKLQVERTVDKTAARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIGIRPDAED 210
            D V+  ++  I  L   ++  + +++E+  I++KR   EY L R+   + DYL Y  +E  L  + K RRA+    TK  +     +   R+  IY R + KF+ D  +WL Y  +  KTG++R   ++FA+AI     +E++W+ A A+ ++ N +   AR L QRALR    +  LW EYFRLEL ++ K++ARR  +GI    E+
Sbjct:    3 DTVQFYMEEMIPELRDLEQKGIFSKKEIQSIIKKREKFEYALKRRISKKADYLRYIEYEMNLEALRKKRRARMVSNTKQSISDYAGQR--RIYFIYKRCLTKFKGDISIWLQYINYAKKTGASRTLGKIFAQAIQLHPTNEKMWILAAAWEWEENANIVAARVLLQRALRLNTTTESLWHEYFRLELVYIAKILARRQVLGIDVSEEE 208          
BLAST of Ggra5806.t1 vs. uniprot
Match: A0A507E3J3 (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E3J3_9FUNG)

HSP 1 Score: 120 bits (301), Expect = 1.480e-24
Identity = 75/233 (32.19%), Postives = 117/233 (50.21%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLILKRRAKQRELTKLQVERTVDKTAA-----------RVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIGIRPDAEDGDDQFSALNPGENQI 225
            D+V+  L+  +  L   Q   +    EV  IV++R  HEY + R    + D+L Y A+E  L  + K+R ++  + +      +                R++ +Y R +QKF  D+ LW+ Y   C  T ST+A A+VFAKAI     ++  W+ A A+ F  NG+ + AR L QR LR  P+S KLW EYF+LEL ++ K+  RR  +  + D     +  +A+ P    I
Sbjct:    3 DQVQYHLEKMVPELEDLQDRGIFQAAEVRAIVKQRTAHEYRIHRIIPLKADFLRYIAYEENLERLRKKRKQRMGMDQAPTAEDIANGVKHSSLSDYSIMRRIHGLYGRLLQKFGGDKALWIQYFDWCRSTRSTKALAKVFAKAIQLHPTNDTFWIMAAAWEFQDNGNMSSARVLLQRGLRINPESKKLWVEYFKLELLWVEKIKERRKVL-FKIDGSRAPETTTAIQPPSESI 234          
BLAST of Ggra5806.t1 vs. uniprot
Match: A0A1U8BMQ1 (U3 small nucleolar RNA-associated protein 6 homolog isoform X1 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8BMQ1_NELNU)

HSP 1 Score: 119 bits (299), Expect = 2.250e-24
Identity = 73/207 (35.27%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLILK-------RRAKQRELTKLQVERTVDKTAARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIG 203
            D V+  L+  +  L   +R  L  RRE+++IV+KRR+ EY L R +  + DYL Y  +E++L  + +       R+ K+++  KL+   +     +R+  IY  AV +++ D DLW  Y + C + G  R   +V A+ I +      +W+ A A+ FD N +   AR L Q  LRA P S  LW EY R+EL +L KL AR+ A+G
Sbjct:    3 DVVQYRLERMVDELDDLERRGLFTRREIAEIVKKRRNFEYRLKRPSPLKQDYLAYIEYEKQLDSLRRLRKKSVARQMKEKDNKKLRKSVSDFAGVSRILEIYRLAVMRYKGDIDLWFRYLEFCRERGHGRMK-QVLAQVIRFHPKVPGLWIYAAAWEFDHNLNVAAARALMQSGLRACPNSEDLWVEYLRMELTYLNKLKARKAALG 208          
BLAST of Ggra5806.t1 vs. uniprot
Match: A0A438EEL8 (U3 small nucleolar RNA-associated protein 6-like n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EEL8_VITVI)

HSP 1 Score: 119 bits (297), Expect = 3.570e-24
Identity = 73/204 (35.78%), Postives = 119/204 (58.33%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLI--LKRRAKQRELTKLQVERTVDKTA--ARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIG 203
            D V+  L+  ++ L   +R  + +RRE+++IV++RR  EY L R +  + DYL Y  +E++L  +  L++++  RE  K + +++V   A  +R+  IY  AV +++ D DLW  Y + C +  + R   +V A+ I +      +W+ A A+ FD N +AT AR L Q  LR  P S  LW EY R+EL +L KL AR++A+G
Sbjct:    3 DVVQYRLERMVNELDDLERRGVFSRREIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEYEKQLDSLRRLRKKSVAREAKK-KTKKSVSDFAGVSRILEIYQLAVMRYKGDIDLWFRYLEFCRERRNGRMK-KVLAQVIRFHPKVPGVWIYAAAWEFDHNLNATAARALMQSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALG 204          
BLAST of Ggra5806.t1 vs. uniprot
Match: E0CVR6 (Uncharacterized protein n=2 Tax=Vitis TaxID=3603 RepID=E0CVR6_VITVI)

HSP 1 Score: 119 bits (297), Expect = 3.870e-24
Identity = 73/204 (35.78%), Postives = 119/204 (58.33%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLI--LKRRAKQRELTKLQVERTVDKTA--ARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIG 203
            D V+  L+  ++ L   +R  + +RRE+++IV++RR  EY L R +  + DYL Y  +E++L  +  L++++  RE  K + +++V   A  +R+  IY  AV +++ D DLW  Y + C +  + R   +V A+ I +      +W+ A A+ FD N +AT AR L Q  LR  P S  LW EY R+EL +L KL AR++A+G
Sbjct:    3 DVVQYRLERMVNELDDLERRGVFSRREIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEYEKQLDSLRRLRKKSVAREAKK-KTKKSVSDFAGVSRILEIYQLAVMRYKGDIDLWFRYLEFCRERRNGRMK-KVLAQVIRFHPKVPGVWIYAAAWEFDHNLNATAARALMQSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALG 204          
BLAST of Ggra5806.t1 vs. uniprot
Match: A0A197K993 (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K993_9FUNG)

HSP 1 Score: 119 bits (297), Expect = 4.690e-24
Identity = 67/213 (31.46%), Postives = 114/213 (53.52%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLILK-RRAKQRELTKLQVERTVDKTAARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIGIRPDAEDGDDQF 215
            D V+  ++  I  +   ++  + ++ E+  I+++R+  EY L R+   + D+L Y  +E  L  + K RRA+    TK  +         R+  IY R + KF+ D  +WL Y     K G+TR   ++FA+AI     +E++W+ A A+ ++ N +   AR L QRA+R    +  LW EYFRLEL ++ K++ARR  +GI    ++ +D  
Sbjct:    3 DTVQFYMEEMIPEMRDLEQKGIFSKTEIKSIIKQRQKFEYALKRRISKKADFLRYIEYEMNLEALRKKRRARMVSDTKKSISDYAG--PRRIFFIYKRCLIKFKGDISIWLQYIDFAKKNGATRTLGKIFAQAIQLHPTNEKMWILAAAWEWEENANIVAARVLLQRAIRLNTTTENLWHEYFRLELVYIAKILARRQVLGIDASNKEVEDDL 213          
BLAST of Ggra5806.t1 vs. uniprot
Match: A0A5B6ZWP1 (Uncharacterized protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZWP1_DAVIN)

HSP 1 Score: 117 bits (292), Expect = 1.630e-23
Identity = 76/223 (34.08%), Postives = 127/223 (56.95%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLI--LKRRAKQRELTKL---QVERTVDKTA--ARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIG-----IRPDAEDGDDQ 214
            D V+ +L+  ++ L   +R  L  RRE+++IV++RR  EY L R +  + D+L Y  +E++L  +  L+++A  REL K    ++++++   +  +R+  IY  A  +F+ D +LW  Y + C +  + R   +V A+ I +      IW+ A A+ FD N +A  AR L Q  LRA P S  LW EY R+EL +L KL AR++A+G     +  D +D D++
Sbjct:    3 DVVQYKLERMVNELDDLERRGLFTRREIAEIVKQRRKFEYRLKRPSPLKQDFLAYIDYEKQLDALRLLRKKAVARELKKKGNKKMKKSISDFSGVSRIIEIYRLATNRFKGDIELWFQYLEFCRERQNGRMK-KVLAQVIRFHPKVPGIWIYAAAWEFDHNLNAAAARALMQSGLRACPTSEDLWVEYLRMELTYLNKLKARKVALGEDEGTLIRDHQDADEK 224          
BLAST of Ggra5806.t1 vs. uniprot
Match: U3 small nucleolar RNA-associated protein 6 homolog n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3B5A4 (U3 small nucleolar RNA-associated protein 6 homolog n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3B5A4)

HSP 1 Score: 116 bits (291), Expect = 2.150e-23
Identity = 73/207 (35.27%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    4 DKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNVSRTDYLHYAAFERELHLILKRRAKQ-----RELTKLQVERTVDKTA--ARVNLIYSRAVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAIAFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRLAIG 203
            D V+  L+  +  L   +R  L  R E+++IV+KRR+ EY L R +  + DY+ Y  +E++L  + + R K      ++  K ++ ++V   A  +R+  IY  AV +F+ D DLW  Y + C + G  R   +V A+ I +      +W+ A A+ FD N +   AR L    LRA P S  LW EY R+EL +L KL AR++AIG
Sbjct:    3 DVVQYRLERMVDELDDLERRGLFTRPEIAEIVKKRRNFEYRLKRPSPLKQDYIAYIEYEKQLDSLRRLRKKSVVRQLKQKGKKRLRKSVSDFAGVSRILEIYRLAVMRFKGDIDLWFRYLEFCRERGHGRMK-QVLAQVIRFHPKVPGLWIYAAAWEFDHNLNVAAARALMHSGLRACPSSEDLWVEYLRMELTYLNKLNARKVAIG 208          
The following BLAST results are available for this feature:
BLAST of Ggra5806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZB69.410e-22351.74U3 small nucleolar RNA-associated protein 6 n=1 Ta... [more]
U3 small nucleolar RNA-associated protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1AD14.220e-5954.23U3 small nucleolar RNA-associated protein 6-like n... [more]
A0A1Y2GVG36.920e-2734.13U3 small nucleolar RNA-associated protein 6-domain... [more]
A0A507E3J31.480e-2432.19Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A1U8BMQ12.250e-2435.27U3 small nucleolar RNA-associated protein 6 homolo... [more]
A0A438EEL83.570e-2435.78U3 small nucleolar RNA-associated protein 6-like n... [more]
E0CVR63.870e-2435.78Uncharacterized protein n=2 Tax=Vitis TaxID=3603 R... [more]
A0A197K9934.690e-2431.46Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A5B6ZWP11.630e-2334.08Uncharacterized protein n=1 Tax=Davidia involucrat... [more]
U3 small nucleolar RNA-associated protein 6 homolog n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3B5A42.150e-2335.27U3 small nucleolar RNA-associated protein 6 homolo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 158..190
e-value: 0.074
score: 22.2
coord: 123..155
e-value: 87.0
score: 8.5
coord: 659..693
e-value: 2.3
score: 17.2
coord: 89..121
e-value: 0.29
score: 20.2
IPR013949U3 small nucleolar RNA-associated protein 6PFAMPF08640U3_assoc_6coord: 13..82
e-value: 6.2E-14
score: 51.7
IPR013949U3 small nucleolar RNA-associated protein 6PANTHERPTHR23271HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66coord: 4..725
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 51..201
e-value: 1.1E-16
score: 62.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 59..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..351
NoneNo IPR availablePANTHERPTHR23271:SF1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 HOMOLOGcoord: 4..725

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:357607..359802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5806.t1Ggra5806.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 357607..359802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5806.t1 ID=Ggra5806.t1|Name=Ggra5806.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=732bp
MGGDKVERELDGTISVLHAAQRANLLNRREVSDIVRKRRHHEYNLLRKNV
SRTDYLHYAAFERELHLILKRRAKQRELTKLQVERTVDKTAARVNLIYSR
AVQKFRFDEDLWLHYAKHCIKTGSTRAAARVFAKAIAYRNDSERIWLAAI
AFHFDTNGDATGARTLAQRALRALPKSVKLWKEYFRLELCFLGKLVARRL
AIGIRPDAEDGDDQFSALNPGENQISGSGGLLDGNTSSGDADSGYESSDE
NNTDSARKDTTRQNSQAVMIEMEDKKCPASASEPESEQGPGVAEGTDSAD
QQDSERRTEVQDTTRDTDEYQEHDETNSGEESDSSSGAEGSDEESGESEC
SSDGNDESRTNTLSFWEGGVPFAVFRNASDRLKLSDIDRAEFWDVAASTP
FVPPKLLTHMLIFMKAKYMECCVVQLISIRQPWDIDRTTRKRSLGNKIGE
ENGEIYLSESDEVALSTHALEVAELLSTAISSTSFARLPDSSVAGVRLLL
QNFSEIVNNTCFSKTFEDAVKEILSRFEAHQAQGMFDVEELESGKGASAS
QQDMKEWTFSKFASLFQESNDGFSASPEVYDALKHKVIVPFRSLEQDRLV
CLYLSKENNISQIRSFTKAIMALPPVTMESLKAAINAELRILADSRKNDA
TMIPQSDQVMVSHTRKLFKLAISLPAAKRDVDLWLSYVDFERSVSGDMRE
ASTVNWKATKVLMPSFQESFTERQTLRNLAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR013949Utp6
IPR011990TPR-like_helical_dom_sf