Ggra5815.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5815.t1
Unique NameGgra5815.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length168
Homology
BLAST of Ggra5815.t1 vs. uniprot
Match: A0A2V3ISX5 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX5_9FLOR)

HSP 1 Score: 253 bits (647), Expect = 4.130e-84
Identity = 120/167 (71.86%), Postives = 143/167 (85.63%), Query Frame = 0
Query:    1 MGLDFPAKKFDQQLRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAGKKSVGFF 167
            MGL+F  +K D+QLRIGIV TRWN  YV  +   T +TL ++G++  DIV+MQV GA+E+PMAARFM ASQKVDAV+CLG+LIKGETDHY+YIASAVS GLMDLQLT+QIP++FGVLCCR E+Q Q RT GDKAHA D+A+TAIEMAQLRKSQ+GG+S GKKSVGFF
Sbjct:    1 MGLEFANRKNDEQLRIGIVSTRWNEQYVQAMLSQTLETLSEQGIAKEDIVRMQVAGAYEVPMAARFMAASQKVDAVICLGILIKGETDHYEYIASAVSGGLMDLQLTLQIPMVFGVLCCRTEQQVQDRTTGDKAHASDYAKTAIEMAQLRKSQIGGMSGGKKSVGFF 167          
BLAST of Ggra5815.t1 vs. uniprot
Match: R7QUU9 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUU9_CHOCR)

HSP 1 Score: 251 bits (640), Expect = 4.810e-83
Identity = 120/167 (71.86%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    1 MGLDFPAKKFDQQLRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAGKKSVGFF 167
            MGL FP +K D++LRIG++ TRWN  +V  +  D K TL   G+ + DIV MQVPGA+E+P+AAR MCASQKVDAVVCLG+LIKGETDHY+YIASAV++GLMDLQLT+  PI+FGVL CR+EEQA+ R+LGDK+HA DWA TAIEMAQLRKSQMGGVSAGKKSVGFF
Sbjct:    1 MGLTFPDRKVDEKLRIGVIYTRWNAEFVGPMFKDVKDTLSDNGLKEDDIVLMQVPGAYELPIAARLMCASQKVDAVVCLGVLIKGETDHYEYIASAVTNGLMDLQLTLSTPIVFGVLTCRDEEQAKARSLGDKSHAGDWALTAIEMAQLRKSQMGGVSAGKKSVGFF 167          
BLAST of Ggra5815.t1 vs. uniprot
Match: A0A5J4YVF5 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF5_PORPP)

HSP 1 Score: 171 bits (434), Expect = 1.110e-50
Identity = 82/168 (48.81%), Postives = 116/168 (69.05%), Query Frame = 0
Query:    1 MGLDFPAKKFD-QQLRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVS-AGKKSVGF 166
            MG +    + D ++ RIG++ TRWN   V+ ++ D   TL   GV + +I+Q +VPG +E+P+AARF+  +QK+DA+VCLG+L+KGET+HY+YIA  V+  LM++Q+   +PI+FGVL C  EEQA+ R  G  +HA DWA TA+EMA LR SQMG     G K +GF
Sbjct:   54 MGKEVTFAEMDGKKFRIGVLATRWNAELVEAMQKDVVDTLKASGVENDNIIQFKVPGTWELPLAARFVSITQKLDAIVCLGVLVKGETNHYEYIAENVAKSLMEIQVQSTVPIVFGVLTCLTEEQAEFRATGKGSHAKDWALTAVEMATLRSSQMGKPDQTGAKKIGF 221          
BLAST of Ggra5815.t1 vs. uniprot
Match: A0A7S0TRQ1 (6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TRQ1_HEMAN)

HSP 1 Score: 165 bits (418), Expect = 2.160e-48
Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 0
Query:    2 GLDFPAKKFDQQLRIGIVCTRWNRHYVDKLRDDTKQTLLQE-GVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSA 159
            G+DFPA    ++ R+GIV TRWN   VDKLRD +K+ L    GV   +IV+ +VPGA+E+P+AAR+M  +QKVDAV+ +G+L+KGETDHYD I  A  S LM LQL   IP++ G+L C +  QA+ R  GD  H   W +TA+EMA LR +QMG VSA
Sbjct:   68 GIDFPALD-GKETRVGIVYTRWNAEVVDKLRDGSKKGLTDICGVQADNIVEFEVPGAWELPVAARYMALTQKVDAVIAIGVLVKGETDHYDMIKDAACSALMTLQLETGIPVLNGILGCHDMSQAEARATGDNNHGVWWGQTAVEMALLRATQMGKVSA 225          
BLAST of Ggra5815.t1 vs. uniprot
Match: A0A1X6PJM4 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJM4_PORUM)

HSP 1 Score: 164 bits (415), Expect = 5.310e-48
Identity = 82/166 (49.40%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    5 FPAKKFDQQLRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAG---KKSVGFF 167
            FP    D+ LR+G++ TRW    VD L +     L + G+    +V+M VPGAFE+PMAAR M  +QKVDA+V +GLL++GET HY+YI+ AV+  LM+LQL   IPI+ G+L C + EQA +RT G K+ A  WA  A+EM  LR SQ+G  S     K SVGFF
Sbjct:   65 FPTSDTDKGLRVGVIRTRWGGEMVDALHEQVVAGLTEAGLEGESVVEMTVPGAFEVPMAARLMGLAQKVDAIVVVGLLVQGETGHYEYISKAVTGALMELQLISSIPIVNGILTCTSTEQAAERTTGPKSQAKAWAEAAVEMGGLRSSQVGAKSRTTNKKPSVGFF 230          
BLAST of Ggra5815.t1 vs. uniprot
Match: A0A7S1ZQB7 (6,7-dimethyl-8-ribityllumazine synthase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQB7_TRICV)

HSP 1 Score: 159 bits (402), Expect = 3.550e-46
Identity = 74/154 (48.05%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   12 QQLRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAGKKSVG 165
            +++R+GI+ TRWN  +VD L D  K+ L + GV D ++   +VPG++E+P+AA+F+  S +VDA++C G+LIKG+T H++YI  AVSSG+M  QL    P IFGVL C NE+Q   R+ GD  H  DW +TA+EMA LR   +G    GKK  G
Sbjct:   68 EEVRVGIIKTRWNSEHVDNLVDGAKKALSECGVKDENVFVTEVPGSYELPLAAKFLAMSNRVDAIICCGVLIKGDTLHFEYICDAVSSGIMSTQLATSTPCIFGVLTCLNEQQVIVRSTGDSNHGYDWGKTAVEMASLRNEALG--LKGKKGKG 219          
BLAST of Ggra5815.t1 vs. uniprot
Match: A0A7S1BJ35 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJ35_9STRA)

HSP 1 Score: 159 bits (403), Expect = 4.460e-46
Identity = 77/153 (50.33%), Postives = 105/153 (68.63%), Query Frame = 0
Query:   14 LRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAGKKSVGF 166
            LRIGI+ TRWN+  VD L D  K+ L + GV D ++   ++PG++E+P+AARF+  S  VDAV+C+G+LIKG+T H++YI SAVSSG+M++QL    P IFGVL   N++Q   R+ GD  H   W +TAIEMA LR   +G    GKK+ GF
Sbjct:   59 LRIGIIKTRWNKEAVDSLLDGAKEALKECGVKDENVFVKEIPGSYELPLAARFLALSGTVDAVICMGVLIKGDTMHFEYICSAVSSGIMNVQLQTSTPCIFGVLTALNDQQVVDRSTGDNNHGYGWGKTAIEMALLRNEALG--KTGKKNRGF 209          
BLAST of Ggra5815.t1 vs. uniprot
Match: A0A7S2CUY9 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CUY9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 8.230e-46
Identity = 81/166 (48.80%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    2 GLDFPAKKFD-QQLRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAGKKSVGF 166
             +D   K+ D    RIGI+ TRWN   ++ L+   K+TL   GV D +I + QVPGAFE+P+AARF+  S  VDA+VC+G LIKG+T H++YI+ +VSSG+M++ L    PIIFGVL    E+QA  R  GD  H   WA+TA+EMA LRK  +G   A   S+GF
Sbjct:   42 AMDISFKELDGSDCRIGIISTRWNPEIINSLQVACKKTLDDVGVKDENIFETQVPGAFELPLAARFLALSGTVDAIVCIGCLIKGDTQHFEYISDSVSSGIMNVGLQTSTPIIFGVLTVNTEQQALDRATGDDNHGISWAQTAVEMALLRKDALGKKPA---SMGF 204          
BLAST of Ggra5815.t1 vs. uniprot
Match: D8LLC7 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC7_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.550e-45
Identity = 74/152 (48.68%), Postives = 105/152 (69.08%), Query Frame = 0
Query:   14 LRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAGKKSVG 165
            +R+GI+ TRWN   V++L D  K++L +  V++++I + +VPGAFE+P+AARF+  SQ VDAVVC+G LIKG+T H++YIA +   GLMD+ +    P++ GVL C  EEQA +R+ GD  H  DW +TA+EM  LR S  G    GKK+ G
Sbjct:   74 VRVGIISTRWNEEIVNRLTDGVKESLKECNVTESNIFETKVPGAFELPLAARFLSLSQTVDAVVCVGCLIKGDTMHFEYIAESTCKGLMDVSIQTSTPVVLGVLTCTEEEQAIKRSTGDNNHGVDWGKTAVEMGLLRMSATG---VGKKAGG 222          
BLAST of Ggra5815.t1 vs. uniprot
Match: M1VC82 (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VC82_CYAM1)

HSP 1 Score: 156 bits (394), Expect = 8.580e-45
Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = 0
Query:   14 LRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIVQMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSGLMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLRKSQMGGVSAGKKS 163
            LRIG+V +RWN      L +  K+TL +  VS  +IV+++VPGAFE+P+ AR M  +Q+VDAVVCLG LIKGET H+D IA   S+ +M LQ+T  +PI+FGVL C +EEQA+ R +G    A DWA+TA+EM  ++    G   AGK+S
Sbjct:   79 LRIGLVRSRWNEEITGSLLEGAKRTLRECKVSPENIVELEVPGAFELPLGARLMIETQRVDAVVCLGCLIKGETTHFDVIADKASAAIMQLQMTTAVPIVFGVLTCLSEEQARARAMGPDNLAVDWAKTAVEMGVVKNVMQGKRPAGKES 228          
The following BLAST results are available for this feature:
BLAST of Ggra5815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISX54.130e-8471.866,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Gr... [more]
R7QUU94.810e-8371.866,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ch... [more]
A0A5J4YVF51.110e-5048.816,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Po... [more]
A0A7S0TRQ12.160e-4852.836,7-dimethyl-8-ribityllumazine synthase n=2 Tax=He... [more]
A0A1X6PJM45.310e-4849.406,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Po... [more]
A0A7S1ZQB73.550e-4648.056,7-dimethyl-8-ribityllumazine synthase (Fragment)... [more]
A0A7S1BJ354.460e-4650.336,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Co... [more]
A0A7S2CUY98.230e-4648.806,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Di... [more]
D8LLC73.550e-4548.686,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ec... [more]
M1VC828.580e-4550.676,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Cy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002180Lumazine/riboflavin synthasePFAMPF00885DMRL_synthasecoord: 14..150
e-value: 1.0E-49
score: 168.0
IPR036467Lumazine/riboflavin synthase superfamilyGENE3D3.40.50.960Lumazine/riboflavin synthasecoord: 7..153
e-value: 1.8E-53
score: 182.2
IPR036467Lumazine/riboflavin synthase superfamilySUPERFAMILY52121Lumazine synthasecoord: 10..151
IPR034964Lumazine synthaseTIGRFAMTIGR00114TIGR00114coord: 14..148
e-value: 1.0E-40
score: 137.0
IPR034964Lumazine synthasePANTHERPTHR210586,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASEcoord: 11..152
IPR034964Lumazine synthaseHAMAPMF_00178Lumazine_synthcoord: 9..153
score: 24.100651
IPR034964Lumazine synthaseCDDcd09209Lumazine_synthase-Icoord: 16..147
e-value: 1.19448E-62
score: 187.267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:382256..382759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5815.t1Ggra5815.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 382256..382759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5815.t1 ID=Ggra5815.t1|Name=Ggra5815.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=168bp
MGLDFPAKKFDQQLRIGIVCTRWNRHYVDKLRDDTKQTLLQEGVSDADIV
QMQVPGAFEIPMAARFMCASQKVDAVVCLGLLIKGETDHYDYIASAVSSG
LMDLQLTVQIPIIFGVLCCRNEEQAQQRTLGDKAHAPDWARTAIEMAQLR
KSQMGGVSAGKKSVGFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002180LS/RS
IPR036467LS/RS_sf
IPR034964LS