Ggra6430.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6430.t1
Unique NameGgra6430.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length564
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6430.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 479..499
NoneNo IPR availableGENE3D3.30.70.100coord: 23..120
e-value: 4.3E-14
score: 54.1
NoneNo IPR availableGENE3D3.10.450.50coord: 436..560
e-value: 3.5E-6
score: 28.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..563
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
IPR007138Antibiotic biosynthesis monooxygenase domainPFAMPF03992ABMcoord: 41..103
e-value: 1.8E-7
score: 31.2
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 38..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:211008..212699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6430.t1Ggra6430.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 211008..212699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6430.t1 ID=Ggra6430.t1|Name=Ggra6430.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=564bp
MSSTSLPIILFALCCSFVYAQDSAEDQCKAPGSQVTGFSVFTCRPEDANA
FAQDFNSLIGNSRAEPGNLLYNMYTNPGEPGVIGFIEAYKDFQALETHLA
QEYVTSIFSHQYYNELRLKPADLYGPWVEYIPEEDRCSASDERQPIEMVF
YWVMNCTRQTVWDVITDWEDASWGMGHPETTMVPLDEDGQVMSDEEAANV
PRPLDVQEGLGPVAQRRTWAGGSYVDVRMLSKNDSNFTTVQQTLSVTSFG
GVTFDDYYVTMSLDAEGLDPDLQSRMRYHIKATVKIGTNEEARQGMKNEF
YGPRIEYYQVYFNCTKGINMKRAERTITKLYDALRAPAEERPELLDGLFA
GGFNVDGYIEDTLGKDVDPAAVADIKQPIELFATPDLRVVAVEDIVITSL
AGISVKSRIVIYSIDEWGRIFVTRIFDERCDDRKCKKLVEATEKYYKKLE
KKSLNKFERLFDDDAKVYCPVSFSPSISVEDLYNKMKEYNVEYTHLEQRS
FVNMDYKQTAQLLEATYTLADGMKKEATPVEILSFDKHEKITMFESFYEP
LNLDYAALEEEKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007138ABM_dom
IPR011008Dimeric_a/b-barrel