Ggra3993.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra3993.t1
Unique Name	Ggra3993.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	270

Homology

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BLAST of Ggra3993.t1 vs. uniprot
Match: A0A2V3ISR0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR0_9FLOR)

HSP 1 Score: 206 bits (525), Expect = 2.650e-62
Identity = 110/218 (50.46%), Postives = 150/218 (68.81%), Query Frame = 0

Query:   36 RSSSKNLLPSLRILFRPTPGIGLDAHMPFNKHVRLFMSLESYFGSTSTVKFGVEPVKFPFLRFQCAPDLRFIVRLPLVRISEYNRIYMGSQLTLFQNGQAPKLNTTDFGALWKGIKKLMQPITEVQRNASLSGMLLSGKQRRALKEALQQARLRRDIKSKAR-DKRQESSPKHSDGMNKVEPGDDGDLI-DLGESLKHRYHQRMQLEREMDPPSLPEF 251
            R S+  +LP+LR+LFRP PG+GLDA +PF KHVR +MSLESYF  TS V+FG+EP KFPF+RFQCAP++R  VRLPL+RISE+NR Y GSQLT+  NGQ PKLN   F A + G+K  ++PI E+QR++S+ G+LL+ +QR AL++AL++A+ +RD ++      R E    H D    ++  +   +I DL E L+  +  R  L RE   P L EF
Sbjct:   20 RRSTNFMLPTLRVLFRPQPGLGLDARLPFTKHVRWYMSLESYFSGTSAVRFGIEPTKFPFIRFQCAPEVRLSVRLPLLRISEFNRAYFGSQLTIVSNGQVPKLNLNGFAAFYDGLKTFLKPICELQRHSSIGGLLLNDRQREALRKALEKAKTKRDAQANQLIPGRDELLKTHKDNPE-IDHEEKARMIKDLREKLQGSWKDR-SLNRETIQPDLDEF 235

The following BLAST results are available for this feature:

BLAST of Ggra3993.t1 vs. uniprot

BLAST of Ggra3993.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISR0	2.650e-62	50.46	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..269

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000908_pilon	contig	tig00000908_pilon:302664..303473 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra3993.t1	Ggra3993.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000908_pilon 302664..303473 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra3993.t1 ID=Ggra3993.t1|Name=Ggra3993.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=270bp
MGDRNPLKRLQLYARQRRKTSVNARESGSEEPHSHRSSSKNLLPSLRILF
RPTPGIGLDAHMPFNKHVRLFMSLESYFGSTSTVKFGVEPVKFPFLRFQC
APDLRFIVRLPLVRISEYNRIYMGSQLTLFQNGQAPKLNTTDFGALWKGI
KKLMQPITEVQRNASLSGMLLSGKQRRALKEALQQARLRRDIKSKARDKR
QESSPKHSDGMNKVEPGDDGDLIDLGESLKHRYHQRMQLEREMDPPSLPE
FDFGPSAEQSGESAGKDSG*