Ggra3993.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3993.t1
Unique NameGgra3993.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length270
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:302664..303473 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3993Ggra3993Gracilaria gracilis GNS1m malegenetig00000908_pilon 302664..303473 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3993.t1.stop1Ggra3993.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000908_pilon 302664..302666 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3993.t1.CDS1Ggra3993.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000908_pilon 302664..303473 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3993.t1.exon1Ggra3993.t1.exon1Gracilaria gracilis GNS1m maleexontig00000908_pilon 302664..303473 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3993.t1.start1Ggra3993.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000908_pilon 303471..303473 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3993.t1Ggra3993.t1Gracilaria gracilis GNS1m malepolypeptidetig00000908_pilon 302664..303473 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3993.t1 ID=Ggra3993.t1|Name=Ggra3993.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=270bp
MGDRNPLKRLQLYARQRRKTSVNARESGSEEPHSHRSSSKNLLPSLRILF
RPTPGIGLDAHMPFNKHVRLFMSLESYFGSTSTVKFGVEPVKFPFLRFQC
APDLRFIVRLPLVRISEYNRIYMGSQLTLFQNGQAPKLNTTDFGALWKGI
KKLMQPITEVQRNASLSGMLLSGKQRRALKEALQQARLRRDIKSKARDKR
QESSPKHSDGMNKVEPGDDGDLIDLGESLKHRYHQRMQLEREMDPPSLPE
FDFGPSAEQSGESAGKDSG*
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spliced messenger RNA

>Ggra3993.t1 ID=Ggra3993.t1|Name=Ggra3993.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=810bp|location=Sequence derived from alignment at tig00000908_pilon:302664..303473- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGATAGGAACCCCTTAAAGCGCCTCCAATTGTATGCCCGGCAACG
TCGGAAAACCTCTGTCAATGCGCGTGAATCAGGCTCTGAAGAACCCCATT
CACACCGCTCGTCTTCCAAAAACCTGTTGCCATCCTTGAGAATCTTATTC
CGGCCAACCCCTGGGATTGGTCTCGATGCTCACATGCCGTTTAACAAACA
TGTGAGACTGTTCATGTCACTGGAGTCGTATTTCGGAAGCACTTCTACCG
TCAAGTTTGGGGTTGAACCTGTCAAGTTCCCGTTTCTTCGCTTTCAATGC
GCACCTGACCTACGCTTCATTGTTCGCTTGCCGCTAGTACGTATTTCAGA
ATACAATCGAATCTACATGGGATCACAACTCACCTTGTTCCAGAACGGGC
AAGCGCCAAAGTTAAATACAACCGATTTCGGAGCATTGTGGAAGGGTATA
AAGAAACTCATGCAACCTATTACTGAGGTCCAGAGGAATGCATCCCTTAG
TGGGATGCTACTGAGCGGCAAGCAGAGGCGAGCCCTCAAAGAAGCCTTGC
AACAAGCAAGGTTGAGAAGAGATATAAAGTCAAAGGCTCGCGACAAACGA
CAGGAGAGCTCTCCAAAGCATTCTGATGGAATGAATAAGGTCGAACCTGG
CGACGATGGGGACCTTATAGATTTGGGGGAAAGTCTCAAGCATCGTTATC
ATCAGAGAATGCAACTAGAGAGAGAAATGGATCCCCCTTCACTCCCTGAG
TTCGATTTTGGACCGAGTGCGGAGCAAAGCGGTGAGAGCGCCGGAAAAGA
CAGCGGATGA
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protein sequence of Ggra3993.t1

>Ggra3993.t1 ID=Ggra3993.t1|Name=Ggra3993.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=270bp
MGDRNPLKRLQLYARQRRKTSVNARESGSEEPHSHRSSSKNLLPSLRILF
RPTPGIGLDAHMPFNKHVRLFMSLESYFGSTSTVKFGVEPVKFPFLRFQC
APDLRFIVRLPLVRISEYNRIYMGSQLTLFQNGQAPKLNTTDFGALWKGI
KKLMQPITEVQRNASLSGMLLSGKQRRALKEALQQARLRRDIKSKARDKR
QESSPKHSDGMNKVEPGDDGDLIDLGESLKHRYHQRMQLEREMDPPSLPE
FDFGPSAEQSGESAGKDSG*
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mRNA from alignment at tig00000908_pilon:302664..303473-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3993.t1 ID=Ggra3993.t1|Name=Ggra3993.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=810bp|location=Sequence derived from alignment at tig00000908_pilon:302664..303473- (Gracilaria gracilis GNS1m male)
ATGGGCGATAGGAACCCCTTAAAGCGCCTCCAATTGTATGCCCGGCAACG
TCGGAAAACCTCTGTCAATGCGCGTGAATCAGGCTCTGAAGAACCCCATT
CACACCGCTCGTCTTCCAAAAACCTGTTGCCATCCTTGAGAATCTTATTC
CGGCCAACCCCTGGGATTGGTCTCGATGCTCACATGCCGTTTAACAAACA
TGTGAGACTGTTCATGTCACTGGAGTCGTATTTCGGAAGCACTTCTACCG
TCAAGTTTGGGGTTGAACCTGTCAAGTTCCCGTTTCTTCGCTTTCAATGC
GCACCTGACCTACGCTTCATTGTTCGCTTGCCGCTAGTACGTATTTCAGA
ATACAATCGAATCTACATGGGATCACAACTCACCTTGTTCCAGAACGGGC
AAGCGCCAAAGTTAAATACAACCGATTTCGGAGCATTGTGGAAGGGTATA
AAGAAACTCATGCAACCTATTACTGAGGTCCAGAGGAATGCATCCCTTAG
TGGGATGCTACTGAGCGGCAAGCAGAGGCGAGCCCTCAAAGAAGCCTTGC
AACAAGCAAGGTTGAGAAGAGATATAAAGTCAAAGGCTCGCGACAAACGA
CAGGAGAGCTCTCCAAAGCATTCTGATGGAATGAATAAGGTCGAACCTGG
CGACGATGGGGACCTTATAGATTTGGGGGAAAGTCTCAAGCATCGTTATC
ATCAGAGAATGCAACTAGAGAGAGAAATGGATCCCCCTTCACTCCCTGAG
TTCGATTTTGGACCGAGTGCGGAGCAAAGCGGTGAGAGCGCCGGAAAAGA
CAGCGGATGA
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Coding sequence (CDS) from alignment at tig00000908_pilon:302664..303473-

>Ggra3993.t1 ID=Ggra3993.t1|Name=Ggra3993.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=810bp|location=Sequence derived from alignment at tig00000908_pilon:302664..303473- (Gracilaria gracilis GNS1m male)
ATGGGCGATAGGAACCCCTTAAAGCGCCTCCAATTGTATGCCCGGCAACG
TCGGAAAACCTCTGTCAATGCGCGTGAATCAGGCTCTGAAGAACCCCATT
CACACCGCTCGTCTTCCAAAAACCTGTTGCCATCCTTGAGAATCTTATTC
CGGCCAACCCCTGGGATTGGTCTCGATGCTCACATGCCGTTTAACAAACA
TGTGAGACTGTTCATGTCACTGGAGTCGTATTTCGGAAGCACTTCTACCG
TCAAGTTTGGGGTTGAACCTGTCAAGTTCCCGTTTCTTCGCTTTCAATGC
GCACCTGACCTACGCTTCATTGTTCGCTTGCCGCTAGTACGTATTTCAGA
ATACAATCGAATCTACATGGGATCACAACTCACCTTGTTCCAGAACGGGC
AAGCGCCAAAGTTAAATACAACCGATTTCGGAGCATTGTGGAAGGGTATA
AAGAAACTCATGCAACCTATTACTGAGGTCCAGAGGAATGCATCCCTTAG
TGGGATGCTACTGAGCGGCAAGCAGAGGCGAGCCCTCAAAGAAGCCTTGC
AACAAGCAAGGTTGAGAAGAGATATAAAGTCAAAGGCTCGCGACAAACGA
CAGGAGAGCTCTCCAAAGCATTCTGATGGAATGAATAAGGTCGAACCTGG
CGACGATGGGGACCTTATAGATTTGGGGGAAAGTCTCAAGCATCGTTATC
ATCAGAGAATGCAACTAGAGAGAGAAATGGATCCCCCTTCACTCCCTGAG
TTCGATTTTGGACCGAGTGCGGAGCAAAGCGGTGAGAGCGCCGGAAAAGA
CAGCGGATGA
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