Ggra3909.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3909.t1
Unique NameGgra3909.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length326
Homology
BLAST of Ggra3909.t1 vs. uniprot
Match: A0A2V3IZ79 (Blue-light photoreceptor PHR2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ79_9FLOR)

HSP 1 Score: 366 bits (940), Expect = 9.450e-124
Identity = 198/326 (60.74%), Postives = 227/326 (69.63%), Query Frame = 0
Query:    1 MGAFVAPLSLPSALVQRAQPSCAAVNSRGVSCAIAPSPVPLPSNALRIDAHGEQPKPGATGTHTVVVWFRCDLRLHDNPCLTGLQQCAVAPLLLLPRVPTQPLLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVSISEPLPVPRAFHGVSDVACGQIPGRGRGAGGEQVALKGLDEYCNGALAKVQGGKLHTSFG-RLGPFLEMGCVSPRLLWDRVVARGELSVRRYCAEFELMWREFARFMTLKHGQLPA 325
            MGAFVAPL+L +    R     ++V SR  S  +  SP P         A+   P   A  +  VVVWFR DLRLHDNPCLTG++ C VAPLL+L     Q  LDAAHDLR ALR RG EL+VR A  DV   V  FC +V A  LH +A VSRE R+ EQRV+REVA+ GT V  FWSGGL SPEQLPF +QD+P+DCDAFA AVR+V + EPLPVP +F  VS V  G IPG  +G GGE+VAL GLDEYC+GALAKV GGKL TSFG RL PFL+MGC+SPRLLW RVVA GE S+RRYCAE ELM  EF RFM LK+G LPA
Sbjct:    1 MGAFVAPLALGA----RTHAPTSSVASR--SLPLCASPAPFAQCTPLAAANAPHPDAAAPCSQVVVVWFRSDLRLHDNPCLTGIEDCVVAPLLVLGENAQQASLDAAHDLRDALRRRGCELFVRRAARDVVAAVSHFCSTVRADRLHFSAGVSREQRVLEQRVRREVAAMGTDVTTFWSGGLFSPEQLPFAVQDMPQDCDAFANAVRTVRVDEPLPVPDSFRPVSGVQPGHIPGCIKGCGGEKVALCGLDEYCSGALAKVDGGKLRTSFGGRLEPFLKMGCISPRLLWKRVVADGENSLRRYCAEIELMLLEFRRFMMLKNGVLPA 320          
BLAST of Ggra3909.t1 vs. uniprot
Match: A0A1X6P4F9 (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4F9_PORUM)

HSP 1 Score: 120 bits (301), Expect = 2.450e-27
Identity = 100/347 (28.82%), Postives = 155/347 (44.67%), Query Frame = 0
Query:   29 GVSCAIAPSPVPLPSNALRIDAHGEQPKPGATGTHTVVVWFRCDLRLHDNPCLT-GLQQCA-VAPLLLLP---------------RVPTQPLLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVS-ISEPLPVPRAFHGV-SDVACGQIP------------------GRGRGAGGEQVALKGLDEYCNGALAKVQGGKLHTSFG-------------RLGPFLEMGCVSPRLLWD--RVVARGELSVRRYCAEFELMWREFARFMTLKHGQL 323
            G +  +AP+P+P+   +L  D       P       V+VWFR DLR+HDNP LT  L++   V P+                   R   + L+++   LR +LR+ G++L VR    +   T+ + C  +  + +    +V+ E +  EQ +   + +AG     FW+  L   E LPF +QD+P+   A+ ++V S   I  PLP P     V S V  G IP                  G G   GGE  A++ L  Y      K     L++                ++ P+L +GCVSPR ++   R  A    +V +    FEL+WR+F RF+TLK+G +
Sbjct:   56 GATTGVAPTPMPVMLPSL-CDFGPFSESPAGRKGGKVLVWFRSDLRVHDNPALTHALEEAGTVVPVYCFDPRQFGKTSFGFEKTGRYRAKFLIESVTGLRDSLRKLGSDLIVRSGRPED--TLPELCRRLGVSSVFYHQEVTYEEQEVEQALAESLKAAGVDFKPFWANTLYHSEDLPFAVQDMPDVYTAYRESVESGGEIRSPLPSPTEMPTVPSAVKAGPIPSLKELGLAEPVGEMAAVGGVGTFTGGEAEAMRRLSSYIASVGEKAAAAGLNSRASTSSAAHMGADFSCKISPWLALGCVSPRQIYQDLRSSAAAGAAVAKTTTFFELVWRDFFRFITLKYGSV 399          
BLAST of Ggra3909.t1 vs. uniprot
Match: K9S9A9 (Cryptochrome DASH n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S9A9_9CYAN)

HSP 1 Score: 116 bits (290), Expect = 1.820e-25
Identity = 90/299 (30.10%), Postives = 141/299 (47.16%), Query Frame = 0
Query:   65 VVVWFRCDLRLHDN-PCLTGLQQ-CAVAPLLLL-PR--------------VPTQPLLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVS-ISEPLPVPRAFHGVSDVACGQIPGRG-----------RGA----GGEQVALKGLDEYC-----NGALAKVQGGKLHTSFG-RLGPFLEMGCVSPRLLWDRVVARGE---LSVRRYCAEFELMWREFARFMTLKHG 321
            +++WFR DLRLHD+ P    L+Q  A+AP+    PR                 Q LL++  DLRA+L++RG++L VR    +    V      + AT ++   + + E    E+R+ + +   GT+   FW   L +P+ LPFG  ++PE    F K V S S +  P   P+A   +  +A G++P              RG     GGE   L  L  Y           + + G L   +  +  P+L +GC+SPR + D+V+   +    +   Y   FEL+WR++ RF+ LKHG
Sbjct:    6 ILLWFRNDLRLHDHEPLQRALKQKTAIAPVYCFDPRHFGKTPYGFPKTGAFRAQFLLESVADLRASLQKRGSDLIVRVGKPEEV--VPAIARDLGATAVYFHEEATAEEIAVEERLIQALKDQGTAHQSFWGATLYAPDDLPFGTDEIPEVFTQFRKRVESQSDVRSPFASPKALPALGAIALGELPTLADLGLEPPSPDKRGVLAFRGGETAGLARLQHYFWQSDRLSVYKETRNGMLGADYSSKFSPWLALGCLSPRYIHDQVLTYEDDRTANDSTYWLIFELLWRDYFRFICLKHG 302          
BLAST of Ggra3909.t1 vs. uniprot
Match: D8R6C0 (Photolyase/cryptochrome alpha/beta domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R6C0_SELML)

HSP 1 Score: 114 bits (284), Expect = 1.980e-25
Identity = 95/320 (29.69%), Postives = 140/320 (43.75%), Query Frame = 0
Query:   55 PKPGATGTHTVVVWFRCDLRLHDNPCLTGLQQCAVAPLLLLPRVP------------TQP-----LLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVSISEPLPVPRAFHGV---SDVACGQIPG----------------RGRGAGGEQVALKGLDEYCNGALAKVQGGKLHTSFG-----RLGPFLEMGCVSPRLLW------------DRVVARGELSVRRYCAEFELMWREFARFMTLKHG 321
            P  GA      +VWFR DLR+HDN  L    + +++ + +    P            T P     L++   +LR  LRERG+EL VR  G+ V + +    ++V A  L+   +VS E    E +V   +      V  FW   L   + LPF ++D+P +   F   V+ V +      P+   G+    DV  G IP                 R R  GGE  ALK L  +   +    +GGK ++ +G     ++ P+L MGC+SPR ++            D VVA            FEL+WR+F RF+T KHG
Sbjct:   12 PAAGAGMRRASIVWFRNDLRVHDNEALAAANKESLSVIPVYCFDPKDYGKSASGFDKTGPYRAKFLVECVANLRDNLRERGSELVVR-IGNPVEV-LSTIAKAVGADGLYAHQEVSSEELGMEDKVTSALKDQNVDVKFFWGSTLFHVDDLPFKVEDMPSNYGGFRDKVKDVQVRAATEAPKQLKGLPSQGDVKAGDIPSLQELGLSPVSAAGQHKRNRMIGGEVEALKRLKSFSLVSPPPSKGGKENSIYGANFSSKISPWLAMGCLSPRKMFEDLKKTTSRFVLDSVVASTSGDSGMQWLVFELLWRDFFRFVTKKHG 329          
BLAST of Ggra3909.t1 vs. uniprot
Match: blue-light photoreceptor PHR2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F97E2 (blue-light photoreceptor PHR2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F97E2)

HSP 1 Score: 112 bits (281), Expect = 2.020e-24
Identity = 89/325 (27.38%), Postives = 145/325 (44.62%), Query Frame = 0
Query:   54 QPKPGATGTHTVVVWFRCDLRLHDNPCLTGL--QQCAVAPLLLL-PRV---------PTQP-----LLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVSISEPLPVPRAFHGV---SDVACGQIPG--------------------RGRGAGGEQVALKGLDEYCNGALAKVQGGKLHTS--FG-----RLGPFLEMGCVSPRLLWDRVVARGELSVRRYCAE----------FELMWREFARFMTLKHG 321
            +P  GA      +VWFR DLR+HDN CLT    +  +V PL    PR           T P     L+++  DLR  LRERG++L VR    +  L   +  + + A  +++  +VS+E    E R++  +   G  +  FW   L   E LPF ++++P +   F +  + + + E +     F G+    DV  G+IP                      G   GGE  A++ L ++     A+    K  T+  +G     ++ P+L MGC+SPR ++D +      ++     +          FEL+WR+F RF+T K+ 
Sbjct:  107 EPSNGAVARRAAIVWFRNDLRVHDNECLTNANNESMSVLPLYCFDPRDYGKSSSGFDKTGPFRASFLIESVSDLRKNLRERGSDLVVRIGKPETVLV--EMAKIIGADAVYVHREVSKEEVKAEARIETAMKEEGVELKYFWGSTLYHMEDLPFKLEEMPTNYGGFREKAQGLKVRETIAALDQFKGLPSRGDVEPGEIPSLVDLGLNPNATLSQDGKPAANGSLVGGETEAMQRLRKFAAECKAQPPKSKDGTNSIYGANFSCKISPWLAMGCLSPRHMFDELKKTASRTISASNRKDGDDGMNWLMFELLWRDFFRFITAKYS 429          
BLAST of Ggra3909.t1 vs. uniprot
Match: A9NVB3 (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NVB3_PICSI)

HSP 1 Score: 113 bits (282), Expect = 2.700e-24
Identity = 92/329 (27.96%), Postives = 149/329 (45.29%), Query Frame = 0
Query:   55 PKPGATGTHTVVVWFRCDLRLHDNPCLTGLQQCAVAPLLLLPRVP------------TQP-----LLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVSISEPLPVPRAFHGV---SDVACGQIPGR------------GRGA------GGEQVALKGLDEY---CNGALAKV-QGGKLHTSFG-----RLGPFLEMGCVSPRLLWDRVVARGELSVRRYCAE---------------FELMWREFARFMTLKHG 321
            P   A      +VWFR DLR+HDN  L+   + A++ L +    P            T P     LL+   +LRA LRERG++L VR    +  L   +  +S+ A  L+   +VS E    E++++  +   G     FW   L  PE LPF +QD+P +   F + V+ +S+ + +  P    G+    DV  G++P              G+ A      GGE  AL+ L  +   C     K+ + G   + +G     ++ P+L MGC+SPR +++ +    ++S+     +               FEL+WR+F RF+T K+G
Sbjct:  180 PSNAAALRKAAIVWFRNDLRVHDNEALSSANKEALSVLPVYCFDPRDYGKSSSGFDKTGPFRATFLLECVANLRANLRERGSDLVVRIGRPEEVLV--ELAKSIGADALYAHQEVSHEEIATEEKIKSSLEEEGVETKFFWGSTLYHPEDLPFKLQDMPSNYGGFRERVQRLSVRQIIKDPEQLKGLPTRGDVEPGKVPSLLDLGLNPNFGQDGKTAVNASLTGGESEALQRLKRFAVECREQPNKLGKDGSGESLYGANFSCKISPWLAMGCLSPRYMFEELKKSEKISISSSLGKSSGADSGQGGLNWLKFELLWRDFFRFITKKYG 506          
BLAST of Ggra3909.t1 vs. uniprot
Match: blue-light photoreceptor PHR2-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C935F (blue-light photoreceptor PHR2-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C935F)

HSP 1 Score: 111 bits (277), Expect = 7.500e-24
Identity = 88/335 (26.27%), Postives = 145/335 (43.28%), Query Frame = 0
Query:   40 PLPSNALRIDAHGEQPKPGATGTHTVVVWFRCDLRLHDNPCLTGLQQCAVAPLLLLPRVP-----------------TQPLLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVSISEPLPVPRAFHGV---SDVACGQIP----------------GRGRGAGGEQVALKGLDEYCNGALAKVQGGKLHTSFG-----RLGPFLEMGCVSPRLLWDRVV-----ARGELSVRRYCAE-------FELMWREFARFMTLKHG 321
            PL S    +      P   A    T VVWFR DLR+HDN CL       V+ L +    P                  Q L+++  +LR  L+ RG++L VR    +  L   +  ++V A  ++   + SR+    E+R++  +   G  V  FW   L   + LPF + ++P +  AF   V+ + I + +       G+    DV  G IP                GR    GGE  A++ +  +     A+ +G   ++ +G     ++ P+L MGC+SPR ++D +      A   ++ R+   +       +ELMWR+F RF+T K+ 
Sbjct:   99 PLLSPLSLVPRRPVDPSSAAALRRTAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSNLRKNLQARGSDLVVRVGKPESVLV--ELAKAVGADAVYAHREASRDEVKSEERIEAAMKEEGVEVKYFWGSTLYHIDDLPFKLDEMPTNYGAFRDKVKGLEIRQLMSDLDQLKGLPSQGDVEPGDIPSLVDLGINPTARTSQEGRPAMVGGETEAMERIQNFAAECKAQSKGNNSNSVYGSNFSCKISPWLAMGCISPRSMFDELKKTVSSAASAVTARKGAGDIGLNWLMYELMWRDFFRFITKKYS 431          
BLAST of Ggra3909.t1 vs. uniprot
Match: A0A830HI09 (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HI09_9CHLO)

HSP 1 Score: 110 bits (276), Expect = 9.540e-24
Identity = 88/290 (30.34%), Postives = 129/290 (44.48%), Query Frame = 0
Query:   66 VVWFRC-DLRLHDNP-----CLTGLQQCAVAPLLLLPR--------VPTQPLLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREV--ASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVSISEPLPVPR---AFHGVSDVACGQIPG-RGRGA------GGEQVALKGLDEYCNGALAKVQGGKLHTSFGRLGPFLEMGCVSPRLLWDRVVA----RGELSVRRYCAEFELMWREFARFMTLKHGQLPA 325
            +VWFR  DLR+HD+      C +      +   +  P         +P Q L +A  D+RAALR RG ELYVR    D    V      V A+H++       +   EE R+   +   S+  + +  W G L   + LPF ++++P   +A+A AV    I  P   P         + +  G +P  R R +      GGE   L+ L+ Y   ALA  +G    +   R+ P+L  GC+SPR      VA    R  L++ R    FEL+WR+F   +T   G L A
Sbjct:  152 IVWFRAHDLRIHDHAALRTACASHASAGVICVFVFEPEQQEQQQCNLPRQFLSEAVSDVRAALRRRGAELYVRHG--DAPSVVAALASDVGASHVYYHRGAGEKTAGEEARLDTALRAGSSAATAVPLWHGTLHHVDDLPFPLKNVPGSYEAYAAAVSCAPIRAPEDAPANVPTAPASTLLPSGSLPDCRARASSSAPIVGGEVEGLRRLESYVRDALASPRGAAAASFASRIAPWLAAGCLSPRATLAAAVAQAGARENLAISR--VTFELLWRDFFYMVTTSSGALTA 437          
BLAST of Ggra3909.t1 vs. uniprot
Match: B0C445 (Cryptochrome DASH n=4 Tax=Acaryochloris TaxID=155977 RepID=B0C445_ACAM1)

HSP 1 Score: 111 bits (277), Expect = 9.710e-24
Identity = 86/300 (28.67%), Postives = 139/300 (46.33%), Query Frame = 0
Query:   65 VVVWFRCDLRLHDN--------------PCLT-GLQQCAVAPLLLLPRVP--TQPLLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAV-RSVSISEPLPVPRAFHGVSDVACGQIP---------------GRGRGAGGEQVALKGLDEYC-----NGALAKVQGGKLHTSFG-RLGPFLEMGCVSPRLLWDRVVARGELSVRR---YCAEFELMWREFARFMTLKHGQ 322
            V++WFR DLRLHD+              PC     +Q    P       P   Q LL++  DLR +LR + ++L +R    +  L   +  +++    ++   +V+ E    E R++  +A  G   ++FWS  L  PEQLPF +++LPE    F K V +S     P P P++   + D+A G++P                  + +GGE  AL  L +Y           + + G L  +   +  P+L +GCVSPR +  +V    +  V+    Y   FEL+WR++ RF+  KHG+
Sbjct:    3 VLIWFRNDLRLHDHAPLHQAVRSNADVIPCYCFDPRQFGQTPFGFPKTGPFRAQFLLESVADLRQSLRGKQSDLILRQGHPETVLP--ELAQALKVETVYFNREVTAEEIEVENRLRSALADLGIECLRFWSSTLFHPEQLPFPIRELPEVFTQFRKQVEKSAKPKAPFPTPQSLSTLPDIAPGELPQLEDWGLSSPEPDARAMIQFSGGETAALARLQDYIWEQDRLKRYKETRNGMLQPNDSTKFSPWLALGCVSPRYIHQQVKTYEQDRVKNNSTYWLIFELIWRDYFRFICAKHGK 300          
BLAST of Ggra3909.t1 vs. uniprot
Match: A0A4Y7IXT3 (Photolyase/cryptochrome alpha/beta domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IXT3_PAPSO)

HSP 1 Score: 110 bits (275), Expect = 1.620e-23
Identity = 86/350 (24.57%), Postives = 150/350 (42.86%), Query Frame = 0
Query:   37 SPVPLPSNALRIDAHGEQPKPGATGTHTVVVWFRCDLRLHDNPCLTGLQQCAVAPLLLLPRVP------------TQP-----LLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAADVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCDAFAKAVRSVSISEPLPVPRAFHGV---SDVACGQIP--------------------GRGRGAGGEQVALKGLDEYCNGALAKVQGG----KLHTSFG-----RLGPFLEMGCVSPRLLWDRVVARGELSVRRYCAE----------------FELMWREFARFMTLKHG 321
            SP PL +  +        P  GA    + +VWFR DLR+HDN  L    + +++ L +    P            T P     L+++  DLR +L+ RG++L VR    +  L   +  +++ A  ++   +V+ +    E++++  +   G  V  FW   L   + LPF ++D+P +   F + V+ + I   + V     G+    DV  G+IP                          GGE  AL+ L ++    L++ + G    K  + +G     ++ P+L MGC+SPR ++D +      ++    A                 FEL+WR+F RF+T K+ 
Sbjct:  101 SPTPLQNPLIHNPKRSSDPSNGAAIRRSSIVWFRNDLRVHDNEVLNSANKESMSVLPVYCFDPRDYGKSSSGFDKTGPYRANFLIESVSDLRKSLQSRGSDLVVRIGNPENVLV--ELAKAIGADAVYAHREVAHDEVKAEEKIENAMKEEGVEVKYFWGSTLFHLDDLPFSLEDMPSNYGGFKERVKGLEIRNTIEVLDDLKGMPSRGDVEVGEIPTLLDLGLNPNSTRPQDERPGANASLVGGETEALQRLQKFAAECLSQPKNGNKDGKPDSIYGANFSCKISPWLTMGCLSPRFMFDEIKKSASRTISNVTARKDNGTGSPGDGMNWLMFELLWRDFFRFITKKYS 448          
The following BLAST results are available for this feature:
BLAST of Ggra3909.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ799.450e-12460.74Blue-light photoreceptor PHR2 n=1 Tax=Gracilariops... [more]
A0A1X6P4F92.450e-2728.82Photolyase/cryptochrome alpha/beta domain-containi... [more]
K9S9A91.820e-2530.10Cryptochrome DASH n=1 Tax=Geitlerinema sp. PCC 740... [more]
D8R6C01.980e-2529.69Photolyase/cryptochrome alpha/beta domain-containi... [more]
blue-light photoreceptor PHR2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F97E22.020e-2427.38blue-light photoreceptor PHR2 n=1 Tax=Beta vulgari... [more]
A9NVB32.700e-2427.96Photolyase/cryptochrome alpha/beta domain-containi... [more]
blue-light photoreceptor PHR2-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C935F7.500e-2426.27blue-light photoreceptor PHR2-like n=2 Tax=Tarenay... [more]
A0A830HI099.540e-2430.34Photolyase/cryptochrome alpha/beta domain-containi... [more]
B0C4459.710e-2428.67Cryptochrome DASH n=4 Tax=Acaryochloris TaxID=1559... [more]
A0A4Y7IXT31.620e-2324.57Photolyase/cryptochrome alpha/beta domain-containi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.80coord: 181..323
e-value: 1.4E-16
score: 63.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..325
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 43..179
e-value: 1.0E-15
score: 59.8
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 65..218
e-value: 5.3E-20
score: 72.0
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 63..182
score: 13.371433
IPR002081Cryptochrome/DNA photolyase class 1PANTHERPTHR11455CRYPTOCHROMEcoord: 63..322
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 63..222
IPR036134Cryptochrome/DNA photolyase, FAD-binding domain-like superfamilySUPERFAMILY48173Cryptochrome/photolyase FAD-binding domaincoord: 239..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:67885..68862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3909.t1Ggra3909.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 67885..68862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3909.t1 ID=Ggra3909.t1|Name=Ggra3909.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=326bp
MGAFVAPLSLPSALVQRAQPSCAAVNSRGVSCAIAPSPVPLPSNALRIDA
HGEQPKPGATGTHTVVVWFRCDLRLHDNPCLTGLQQCAVAPLLLLPRVPT
QPLLDAAHDLRAALRERGTELYVRPAGDDVALTVRQFCESVHATHLHLAA
DVSREARIEEQRVQREVASAGTSVIKFWSGGLLSPEQLPFGMQDLPEDCD
AFAKAVRSVSISEPLPVPRAFHGVSDVACGQIPGRGRGAGGEQVALKGLD
EYCNGALAKVQGGKLHTSFGRLGPFLEMGCVSPRLLWDRVVARGELSVRR
YCAEFELMWREFARFMTLKHGQLPA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR006050DNA_photolyase_N
IPR002081Cryptochrome/DNA_photolyase_1
IPR036155Crypto/Photolyase_N_sf
IPR036134Crypto/Photolyase_FAD-like_sf