Ggra8476.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8476.t1
Unique NameGgra8476.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length139
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:816369..816785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8476Ggra8476Gracilaria gracilis GNS1m malegenetig00000041_pilon 816369..816785 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8476.t1.start1Ggra8476.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 816369..816371 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8476.t1.CDS1Ggra8476.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 816369..816785 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8476.t1.exon1Ggra8476.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 816369..816785 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8476.t1.stop1Ggra8476.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 816783..816785 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8476.t1Ggra8476.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 816369..816785 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8476.t1 ID=Ggra8476.t1|Name=Ggra8476.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=139bp
MAFVPTLPACFSNARTRTSVAAAPMTMVQAPLSRRAVLRAAAFSVVGVAA
AAIAGDIDIDIEELKEGVKELDYEEEVTDVGPDAAEKNITRIRKKEEEPA
YKVEERELLKEEEEDYAAMVKREAAEGARIKEQFSKGR*
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spliced messenger RNA

>Ggra8476.t1 ID=Ggra8476.t1|Name=Ggra8476.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=417bp|location=Sequence derived from alignment at tig00000041_pilon:816369..816785+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTTTGTTCCAACATTACCGGCGTGTTTCTCCAATGCTCGCACTCG
CACATCGGTTGCTGCTGCGCCGATGACAATGGTGCAAGCGCCACTGTCAC
GACGCGCGGTGTTGCGGGCGGCTGCGTTTTCGGTTGTGGGCGTTGCCGCC
GCAGCCATCGCTGGTGATATTGATATTGACATCGAGGAACTGAAGGAAGG
CGTAAAGGAACTTGACTATGAAGAGGAGGTTACGGACGTGGGACCCGATG
CTGCTGAGAAGAACATCACTCGCATTCGTAAGAAGGAGGAAGAACCGGCT
TATAAGGTGGAGGAACGGGAGCTTCTGAAGGAGGAAGAAGAAGACTATGC
GGCCATGGTGAAGAGGGAAGCCGCAGAAGGTGCTCGAATCAAGGAGCAAT
TCTCCAAGGGACGCTAG
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protein sequence of Ggra8476.t1

>Ggra8476.t1 ID=Ggra8476.t1|Name=Ggra8476.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=139bp
MAFVPTLPACFSNARTRTSVAAAPMTMVQAPLSRRAVLRAAAFSVVGVAA
AAIAGDIDIDIEELKEGVKELDYEEEVTDVGPDAAEKNITRIRKKEEEPA
YKVEERELLKEEEEDYAAMVKREAAEGARIKEQFSKGR*
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mRNA from alignment at tig00000041_pilon:816369..816785+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8476.t1 ID=Ggra8476.t1|Name=Ggra8476.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=417bp|location=Sequence derived from alignment at tig00000041_pilon:816369..816785+ (Gracilaria gracilis GNS1m male)
ATGGCGTTTGTTCCAACATTACCGGCGTGTTTCTCCAATGCTCGCACTCG
CACATCGGTTGCTGCTGCGCCGATGACAATGGTGCAAGCGCCACTGTCAC
GACGCGCGGTGTTGCGGGCGGCTGCGTTTTCGGTTGTGGGCGTTGCCGCC
GCAGCCATCGCTGGTGATATTGATATTGACATCGAGGAACTGAAGGAAGG
CGTAAAGGAACTTGACTATGAAGAGGAGGTTACGGACGTGGGACCCGATG
CTGCTGAGAAGAACATCACTCGCATTCGTAAGAAGGAGGAAGAACCGGCT
TATAAGGTGGAGGAACGGGAGCTTCTGAAGGAGGAAGAAGAAGACTATGC
GGCCATGGTGAAGAGGGAAGCCGCAGAAGGTGCTCGAATCAAGGAGCAAT
TCTCCAAGGGACGCTAG
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Coding sequence (CDS) from alignment at tig00000041_pilon:816369..816785+

>Ggra8476.t1 ID=Ggra8476.t1|Name=Ggra8476.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=417bp|location=Sequence derived from alignment at tig00000041_pilon:816369..816785+ (Gracilaria gracilis GNS1m male)
ATGGCGTTTGTTCCAACATTACCGGCGTGTTTCTCCAATGCTCGCACTCG
CACATCGGTTGCTGCTGCGCCGATGACAATGGTGCAAGCGCCACTGTCAC
GACGCGCGGTGTTGCGGGCGGCTGCGTTTTCGGTTGTGGGCGTTGCCGCC
GCAGCCATCGCTGGTGATATTGATATTGACATCGAGGAACTGAAGGAAGG
CGTAAAGGAACTTGACTATGAAGAGGAGGTTACGGACGTGGGACCCGATG
CTGCTGAGAAGAACATCACTCGCATTCGTAAGAAGGAGGAAGAACCGGCT
TATAAGGTGGAGGAACGGGAGCTTCTGAAGGAGGAAGAAGAAGACTATGC
GGCCATGGTGAAGAGGGAAGCCGCAGAAGGTGCTCGAATCAAGGAGCAAT
TCTCCAAGGGACGCTAG
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