Ggra8477.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8477.t1
Unique NameGgra8477.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length200
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:816878..817477 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8477Ggra8477Gracilaria gracilis GNS1m malegenetig00000041_pilon 816878..817477 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8477.t1.stop1Ggra8477.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 816878..816880 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8477.t1.CDS1Ggra8477.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 816878..817477 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8477.t1.exon1Ggra8477.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 816878..817477 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8477.t1.start1Ggra8477.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 817475..817477 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8477.t1Ggra8477.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 816878..817477 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8477.t1 ID=Ggra8477.t1|Name=Ggra8477.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=200bp
MASLSAGFVQSGALSSLPKRYAPLHEKQPPRFHTARKVPRRRTQMQIPPP
SHEQPPLSDLEKGPPGYQWNPDYPGTLKPGLEPDNYPLEQVMNSGVYERM
EYTEMDIDERDPRIFEPDEDLLEWLAKHGRLIPRGATDDEIETEAQRQIS
GITEEDLDFGDDDSRMIAYYSRQGEGSASGSGQDFGGFSEPAADAGFDL*
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spliced messenger RNA

>Ggra8477.t1 ID=Ggra8477.t1|Name=Ggra8477.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=600bp|location=Sequence derived from alignment at tig00000041_pilon:816878..817477- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTTCGCTTTCCGCCGGCTTCGTTCAAAGCGGCGCACTTTCGTCGCT
TCCAAAGCGCTATGCACCACTGCACGAAAAGCAACCACCACGCTTTCATA
CCGCGCGAAAGGTGCCGCGTCGCCGCACACAAATGCAAATCCCGCCGCCT
AGCCACGAGCAACCGCCTCTTTCTGACTTGGAGAAGGGTCCTCCAGGCTA
CCAATGGAACCCAGATTACCCCGGAACTCTCAAGCCTGGCTTAGAACCAG
ACAACTACCCCCTCGAACAAGTGATGAACTCGGGCGTGTACGAGCGCATG
GAGTACACTGAGATGGATATTGATGAGAGAGATCCGCGCATTTTCGAGCC
GGATGAGGACCTTCTCGAATGGCTCGCCAAGCACGGACGGCTCATTCCGC
GCGGCGCCACTGACGACGAGATTGAAACTGAGGCCCAACGTCAAATCAGT
GGCATTACAGAAGAAGACTTGGATTTTGGAGACGATGATAGCAGAATGAT
AGCGTATTATTCGCGTCAGGGGGAAGGATCTGCCTCTGGTTCCGGGCAAG
ACTTTGGAGGCTTTTCAGAACCTGCGGCCGATGCGGGCTTTGACCTATGA
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protein sequence of Ggra8477.t1

>Ggra8477.t1 ID=Ggra8477.t1|Name=Ggra8477.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=200bp
MASLSAGFVQSGALSSLPKRYAPLHEKQPPRFHTARKVPRRRTQMQIPPP
SHEQPPLSDLEKGPPGYQWNPDYPGTLKPGLEPDNYPLEQVMNSGVYERM
EYTEMDIDERDPRIFEPDEDLLEWLAKHGRLIPRGATDDEIETEAQRQIS
GITEEDLDFGDDDSRMIAYYSRQGEGSASGSGQDFGGFSEPAADAGFDL*
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mRNA from alignment at tig00000041_pilon:816878..817477-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8477.t1 ID=Ggra8477.t1|Name=Ggra8477.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=600bp|location=Sequence derived from alignment at tig00000041_pilon:816878..817477- (Gracilaria gracilis GNS1m male)
ATGGCTTCGCTTTCCGCCGGCTTCGTTCAAAGCGGCGCACTTTCGTCGCT
TCCAAAGCGCTATGCACCACTGCACGAAAAGCAACCACCACGCTTTCATA
CCGCGCGAAAGGTGCCGCGTCGCCGCACACAAATGCAAATCCCGCCGCCT
AGCCACGAGCAACCGCCTCTTTCTGACTTGGAGAAGGGTCCTCCAGGCTA
CCAATGGAACCCAGATTACCCCGGAACTCTCAAGCCTGGCTTAGAACCAG
ACAACTACCCCCTCGAACAAGTGATGAACTCGGGCGTGTACGAGCGCATG
GAGTACACTGAGATGGATATTGATGAGAGAGATCCGCGCATTTTCGAGCC
GGATGAGGACCTTCTCGAATGGCTCGCCAAGCACGGACGGCTCATTCCGC
GCGGCGCCACTGACGACGAGATTGAAACTGAGGCCCAACGTCAAATCAGT
GGCATTACAGAAGAAGACTTGGATTTTGGAGACGATGATAGCAGAATGAT
AGCGTATTATTCGCGTCAGGGGGAAGGATCTGCCTCTGGTTCCGGGCAAG
ACTTTGGAGGCTTTTCAGAACCTGCGGCCGATGCGGGCTTTGACCTATGA
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Coding sequence (CDS) from alignment at tig00000041_pilon:816878..817477-

>Ggra8477.t1 ID=Ggra8477.t1|Name=Ggra8477.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=600bp|location=Sequence derived from alignment at tig00000041_pilon:816878..817477- (Gracilaria gracilis GNS1m male)
ATGGCTTCGCTTTCCGCCGGCTTCGTTCAAAGCGGCGCACTTTCGTCGCT
TCCAAAGCGCTATGCACCACTGCACGAAAAGCAACCACCACGCTTTCATA
CCGCGCGAAAGGTGCCGCGTCGCCGCACACAAATGCAAATCCCGCCGCCT
AGCCACGAGCAACCGCCTCTTTCTGACTTGGAGAAGGGTCCTCCAGGCTA
CCAATGGAACCCAGATTACCCCGGAACTCTCAAGCCTGGCTTAGAACCAG
ACAACTACCCCCTCGAACAAGTGATGAACTCGGGCGTGTACGAGCGCATG
GAGTACACTGAGATGGATATTGATGAGAGAGATCCGCGCATTTTCGAGCC
GGATGAGGACCTTCTCGAATGGCTCGCCAAGCACGGACGGCTCATTCCGC
GCGGCGCCACTGACGACGAGATTGAAACTGAGGCCCAACGTCAAATCAGT
GGCATTACAGAAGAAGACTTGGATTTTGGAGACGATGATAGCAGAATGAT
AGCGTATTATTCGCGTCAGGGGGAAGGATCTGCCTCTGGTTCCGGGCAAG
ACTTTGGAGGCTTTTCAGAACCTGCGGCCGATGCGGGCTTTGACCTATGA
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