Ggra10568.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10568.t1
Unique NameGgra10568.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length383
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:218198..219346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10568Ggra10568Gracilaria gracilis GNS1m malegenetig00000904_pilon 218198..219346 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10568.t1.stop1Ggra10568.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000904_pilon 218198..218200 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10568.t1.CDS1Ggra10568.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000904_pilon 218198..219346 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10568.t1.exon1Ggra10568.t1.exon1Gracilaria gracilis GNS1m maleexontig00000904_pilon 218198..219346 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10568.t1.start1Ggra10568.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000904_pilon 219344..219346 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10568.t1Ggra10568.t1Gracilaria gracilis GNS1m malepolypeptidetig00000904_pilon 218198..219346 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=383bp
MTWPWPTTPHLALTQQPPQIQNPPLPYLPPPPPPPPIAQLLPPVNLYPTV
PIPAAPSSFGQISAPSSQIHQTDYYNANPPYITPHHNVSSERNHSQFQPG
YNQQRRLNRRQSVRHRDGRSRSVNMPRMQDASRAASFQQRSNKKQQASDQ
NPAQEVLTRLNAKLPGSSPADIETWVNARKANWPSKANVARKEAAAMKRQ
KAGALDTTSHNASQVRHRSDCTQRDLDTSRNVLSRLHAKLPGSSPEEIEA
WVKARKANWPSRANVERKLAAAAAKNETKSTMREADIASGAMAKLADYSS
SDDDDEKLEGKRKTDHTNRGKRIRKRQGGRGKGKNSRRKQVQTSDRKPTL
LRMLLEREIRQEQSVLLQAFRYIVTKKAFEMA*
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spliced messenger RNA

>Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1149bp|location=Sequence derived from alignment at tig00000904_pilon:218198..219346- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTTGGCCATGGCCTACCACCCCACATCTTGCTCTCACGCAGCAACC
ACCTCAAATCCAGAACCCACCACTGCCTTATTTACCCCCACCTCCACCAC
CTCCACCCATAGCACAACTGTTGCCACCAGTCAACCTTTACCCGACCGTT
CCTATCCCAGCCGCGCCATCCAGCTTCGGACAGATCTCAGCACCCTCTTC
TCAGATACACCAGACCGATTATTACAACGCGAATCCGCCTTACATTACCC
CACACCATAACGTATCATCCGAACGGAATCACTCGCAGTTTCAACCAGGA
TACAACCAACAGCGACGATTGAACCGCCGTCAGTCGGTTCGTCATAGAGA
TGGAAGAAGTCGCAGCGTTAACATGCCTCGAATGCAAGATGCTTCAAGAG
CTGCAAGTTTTCAGCAGCGAAGTAACAAGAAACAACAAGCAAGTGACCAG
AACCCTGCACAAGAGGTACTTACACGGTTAAACGCCAAGCTCCCTGGATC
ATCACCTGCTGACATAGAAACATGGGTGAACGCAAGGAAAGCTAACTGGC
CAAGTAAGGCAAACGTAGCGCGAAAGGAAGCTGCTGCTATGAAACGTCAG
AAAGCAGGTGCCCTTGATACTACATCCCATAATGCTTCCCAGGTTAGACA
TAGATCCGACTGTACACAACGGGATTTGGATACATCTCGAAACGTCCTCT
CCCGACTCCACGCAAAGTTGCCCGGTTCATCTCCTGAGGAAATCGAAGCC
TGGGTGAAAGCCCGGAAAGCAAACTGGCCTAGTCGGGCTAATGTTGAGAG
AAAATTAGCAGCTGCAGCAGCTAAGAACGAGACGAAATCGACGATGAGAG
AGGCGGACATTGCTTCGGGAGCAATGGCAAAACTGGCGGACTACAGCAGT
AGTGACGATGATGATGAAAAGCTTGAGGGAAAACGCAAAACAGACCACAC
GAATCGTGGGAAACGGATTCGGAAGAGGCAAGGTGGACGAGGAAAAGGCA
AGAACTCAAGGAGAAAGCAAGTGCAGACCTCAGATCGGAAACCGACTTTA
CTGAGAATGCTTCTAGAAAGAGAGATTAGACAAGAGCAATCAGTTCTGTT
GCAAGCATTTCGTTACATAGTCACCAAGAAGGCTTTTGAAATGGCTTAA
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protein sequence of Ggra10568.t1

>Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=383bp
MTWPWPTTPHLALTQQPPQIQNPPLPYLPPPPPPPPIAQLLPPVNLYPTV
PIPAAPSSFGQISAPSSQIHQTDYYNANPPYITPHHNVSSERNHSQFQPG
YNQQRRLNRRQSVRHRDGRSRSVNMPRMQDASRAASFQQRSNKKQQASDQ
NPAQEVLTRLNAKLPGSSPADIETWVNARKANWPSKANVARKEAAAMKRQ
KAGALDTTSHNASQVRHRSDCTQRDLDTSRNVLSRLHAKLPGSSPEEIEA
WVKARKANWPSRANVERKLAAAAAKNETKSTMREADIASGAMAKLADYSS
SDDDDEKLEGKRKTDHTNRGKRIRKRQGGRGKGKNSRRKQVQTSDRKPTL
LRMLLEREIRQEQSVLLQAFRYIVTKKAFEMA*
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mRNA from alignment at tig00000904_pilon:218198..219346-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1149bp|location=Sequence derived from alignment at tig00000904_pilon:218198..219346- (Gracilaria gracilis GNS1m male)
ATGACTTGGCCATGGCCTACCACCCCACATCTTGCTCTCACGCAGCAACC
ACCTCAAATCCAGAACCCACCACTGCCTTATTTACCCCCACCTCCACCAC
CTCCACCCATAGCACAACTGTTGCCACCAGTCAACCTTTACCCGACCGTT
CCTATCCCAGCCGCGCCATCCAGCTTCGGACAGATCTCAGCACCCTCTTC
TCAGATACACCAGACCGATTATTACAACGCGAATCCGCCTTACATTACCC
CACACCATAACGTATCATCCGAACGGAATCACTCGCAGTTTCAACCAGGA
TACAACCAACAGCGACGATTGAACCGCCGTCAGTCGGTTCGTCATAGAGA
TGGAAGAAGTCGCAGCGTTAACATGCCTCGAATGCAAGATGCTTCAAGAG
CTGCAAGTTTTCAGCAGCGAAGTAACAAGAAACAACAAGCAAGTGACCAG
AACCCTGCACAAGAGGTACTTACACGGTTAAACGCCAAGCTCCCTGGATC
ATCACCTGCTGACATAGAAACATGGGTGAACGCAAGGAAAGCTAACTGGC
CAAGTAAGGCAAACGTAGCGCGAAAGGAAGCTGCTGCTATGAAACGTCAG
AAAGCAGGTGCCCTTGATACTACATCCCATAATGCTTCCCAGGTTAGACA
TAGATCCGACTGTACACAACGGGATTTGGATACATCTCGAAACGTCCTCT
CCCGACTCCACGCAAAGTTGCCCGGTTCATCTCCTGAGGAAATCGAAGCC
TGGGTGAAAGCCCGGAAAGCAAACTGGCCTAGTCGGGCTAATGTTGAGAG
AAAATTAGCAGCTGCAGCAGCTAAGAACGAGACGAAATCGACGATGAGAG
AGGCGGACATTGCTTCGGGAGCAATGGCAAAACTGGCGGACTACAGCAGT
AGTGACGATGATGATGAAAAGCTTGAGGGAAAACGCAAAACAGACCACAC
GAATCGTGGGAAACGGATTCGGAAGAGGCAAGGTGGACGAGGAAAAGGCA
AGAACTCAAGGAGAAAGCAAGTGCAGACCTCAGATCGGAAACCGACTTTA
CTGAGAATGCTTCTAGAAAGAGAGATTAGACAAGAGCAATCAGTTCTGTT
GCAAGCATTTCGTTACATAGTCACCAAGAAGGCTTTTGAAATGGCTTAA
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Coding sequence (CDS) from alignment at tig00000904_pilon:218198..219346-

>Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1149bp|location=Sequence derived from alignment at tig00000904_pilon:218198..219346- (Gracilaria gracilis GNS1m male)
ATGACTTGGCCATGGCCTACCACCCCACATCTTGCTCTCACGCAGCAACC
ACCTCAAATCCAGAACCCACCACTGCCTTATTTACCCCCACCTCCACCAC
CTCCACCCATAGCACAACTGTTGCCACCAGTCAACCTTTACCCGACCGTT
CCTATCCCAGCCGCGCCATCCAGCTTCGGACAGATCTCAGCACCCTCTTC
TCAGATACACCAGACCGATTATTACAACGCGAATCCGCCTTACATTACCC
CACACCATAACGTATCATCCGAACGGAATCACTCGCAGTTTCAACCAGGA
TACAACCAACAGCGACGATTGAACCGCCGTCAGTCGGTTCGTCATAGAGA
TGGAAGAAGTCGCAGCGTTAACATGCCTCGAATGCAAGATGCTTCAAGAG
CTGCAAGTTTTCAGCAGCGAAGTAACAAGAAACAACAAGCAAGTGACCAG
AACCCTGCACAAGAGGTACTTACACGGTTAAACGCCAAGCTCCCTGGATC
ATCACCTGCTGACATAGAAACATGGGTGAACGCAAGGAAAGCTAACTGGC
CAAGTAAGGCAAACGTAGCGCGAAAGGAAGCTGCTGCTATGAAACGTCAG
AAAGCAGGTGCCCTTGATACTACATCCCATAATGCTTCCCAGGTTAGACA
TAGATCCGACTGTACACAACGGGATTTGGATACATCTCGAAACGTCCTCT
CCCGACTCCACGCAAAGTTGCCCGGTTCATCTCCTGAGGAAATCGAAGCC
TGGGTGAAAGCCCGGAAAGCAAACTGGCCTAGTCGGGCTAATGTTGAGAG
AAAATTAGCAGCTGCAGCAGCTAAGAACGAGACGAAATCGACGATGAGAG
AGGCGGACATTGCTTCGGGAGCAATGGCAAAACTGGCGGACTACAGCAGT
AGTGACGATGATGATGAAAAGCTTGAGGGAAAACGCAAAACAGACCACAC
GAATCGTGGGAAACGGATTCGGAAGAGGCAAGGTGGACGAGGAAAAGGCA
AGAACTCAAGGAGAAAGCAAGTGCAGACCTCAGATCGGAAACCGACTTTA
CTGAGAATGCTTCTAGAAAGAGAGATTAGACAAGAGCAATCAGTTCTGTT
GCAAGCATTTCGTTACATAGTCACCAAGAAGGCTTTTGAAATGGCTTAA
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