Ggra10568.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10568.t1
Unique NameGgra10568.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length383
Homology
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BLAST of Ggra10568.t1 vs. uniprot
Match: R7Q3L8 (NUFIP1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3L8_CHOCR)

HSP 1 Score: 97.1 bits (240), Expect = 2.670e-20
Identity = 75/173 (43.35%), Postives = 104/173 (60.12%), Query Frame = 0 
Query:  226 LDTSRNVLSRLHAKLPGSSPEEIEAWVKARKANWPSRANVERKLAAAAAKNETKSTMR-----EADIASGAMAKLA-DYSSSDDD----DEKLE-------GKRKTDHTNRGKRIR----KRQGGRGKGKNSRRKQVQTSDRKPTLLRMLLEREIRQEQSVLLQAFRYIVTKK 377
            +  S+ +L++L A LPG S  EI+ WV ARK NWPSRANV RKLA    + +  + MR      A +A  ++  LA +Y SSD +    D+K +       GK+ T      +R R    KRQ GR  GK S R  V T+ R+P+LL+MLL++EI +E++VLLQAFRYI+ +K
Sbjct:    1 MTMSKEILAKLQASLPGESQAEIDRWVAARKQNWPSRANVARKLAEKKKREQGGAQMRGEAKRRARVADNSLTMLAAEYGSSDGEIDETDKKTQSIKAQPVGKKDTKSVASRQRERGVAKKRQRGRRNGKKSNRN-VSTTPRRPSLLKMLLQKEIHEERNVLLQAFRYIINQK 172
The following BLAST results are available for this feature:
BLAST of Ggra10568.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q3L82.670e-2043.35NUFIP1 domain-containing protein n=1 Tax=Chondrus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019496Nuclear fragile X mental retardation-interacting protein 1, conserved domainPFAMPF10453NUFIP1coord: 244..277
e-value: 1.2E-7
score: 31.5
coord: 167..203
e-value: 1.2E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..157
NoneNo IPR availablePANTHERPTHR13309NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1coord: 236..380
coord: 19..201
NoneNo IPR availablePANTHERPTHR13309:SF0NUCLEAR FRAGILE X MENTAL RETARDATION-INTERACTING PROTEIN 1coord: 236..380
coord: 19..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:218198..219346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10568.t1Ggra10568.t1Gracilaria gracilis GNS1m malemRNAtig00000904_pilon 218198..219346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=383bp
MTWPWPTTPHLALTQQPPQIQNPPLPYLPPPPPPPPIAQLLPPVNLYPTV
PIPAAPSSFGQISAPSSQIHQTDYYNANPPYITPHHNVSSERNHSQFQPG
YNQQRRLNRRQSVRHRDGRSRSVNMPRMQDASRAASFQQRSNKKQQASDQ
NPAQEVLTRLNAKLPGSSPADIETWVNARKANWPSKANVARKEAAAMKRQ
KAGALDTTSHNASQVRHRSDCTQRDLDTSRNVLSRLHAKLPGSSPEEIEA
WVKARKANWPSRANVERKLAAAAAKNETKSTMREADIASGAMAKLADYSS
SDDDDEKLEGKRKTDHTNRGKRIRKRQGGRGKGKNSRRKQVQTSDRKPTL
LRMLLEREIRQEQSVLLQAFRYIVTKKAFEMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019496NUFIP1_cons_dom