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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703842.1 |
| PFAMs | Glyco_transf_34 |
| Max annot lvl | 2759|Eukaryota |
| Evalue | 8.09e-108 |
| EggNOG OGs | 2EAHV@1|root,2SGRN@2759|Eukaryota |
| Description | galactosyl transferase GMA12/MNN10 family |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2280.t1.stop1 | Ggra2280.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000900_pilon 997439..997441 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2280.t1.start1 | Ggra2280.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000900_pilon 1000142..1000144 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra2280.t1 ID=Ggra2280.t1|Name=Ggra2280.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=754bp MLSSLKRGGNCTVFLAALLLFTATDVQCFPSHSEKKIALLHLHDNAPFFA ELGALTLANKQRYATRHDYEMVSHTSSETRGLYRRAKCSDQGAVKRDDLC YVEDKSFQIDQRAPTFGKIKLALSACVGRKGYWLLWSDADAMIVNQTMPL THLIDDRYDLAITADWLMINAGVILFKCSKWTVGFLKRVYAAREFDNARA LDQSAFQHFFDSEADVKQHVKYLPKWTMNVYTEEYRPGDFLLHMAGKLYE ATVEGALAVAHQFDILSTVDNKDDIEAFFRTQYLFGTYSGQCIQDTDEAR DSECKPNDDRRRKLKEALILMSSPSRYRHVALRYYWMPDWKDVYDTEDWN QNSEAFEAQKPLPVERDYDEASELFALGGTLEGIDEEEMNGGFETFVGLN ASMRRSGVPRPLRACDRVALVALAHAAFTLDDLDASSLTRRQVMGPFCPE KIEFNTESREIRASDIQMEDKDCEGDGIITIQSFGSSVPDNASTAVKFFS SRNNDVEGFLVGTLSGGNIVCEAYNLTDGDELIFLKPDEDVEDIEWVDVF GEETPLSKDDDDDFELDDNERYLIVSNRCFYSETGLTDRVCFPADAQIRL QDGSVRRMDEVSIGDNVQVSPNSFSPVFAWTHADAHTRYRFVQLVTERGS ISLTPSHYIYADGVATAAGKVKVGMKLEWRDGSHQTVSEKKYVWKTGLYN PQTINGDIVVNEFVVTTYTTALEPSMAHALLAPVRAAFMTVNKLFAVSQK SGL* back to topspliced messenger RNA >Ggra2280.t1 ID=Ggra2280.t1|Name=Ggra2280.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2262bp|location=Sequence derived from alignment at tig00000900_pilon:997439..1000144- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCTCCAGTTTGAAGCGAGGAGGCAATTGCACCGTTTTCCTAGCGGC GCTCCTGCTGTTCACTGCCACCGACGTGCAATGTTTTCCTTCTCACTCCG AGAAGAAGATTGCTCTGCTTCACCTTCATGATAATGCACCATTCTTCGCT GAACTGGGAGCTCTGACTCTGGCCAACAAGCAACGGTATGCCACCCGGCA TGACTATGAGATGGTTTCACATACTTCGTCTGAAACACGTGGACTGTATC GACGTGCCAAATGTTCGGATCAGGGCGCCGTGAAGCGGGATGATTTGTGC TATGTTGAAGACAAGTCGTTTCAAATTGATCAGCGAGCGCCCACTTTTGG GAAGATCAAGTTGGCGTTGTCCGCATGCGTTGGGAGAAAAGGATATTGGC TGCTGTGGTCAGATGCGGATGCAATGATTGTGAATCAGACTATGCCTTTG ACCCACCTGATTGATGATCGATACGATTTGGCTATCACCGCTGACTGGCT TATGATAAATGCGGGCGTTATACTTTTCAAATGCTCCAAGTGGACTGTAG GATTTCTCAAGCGCGTTTATGCAGCCAGGGAGTTTGATAATGCCCGCGCA TTAGATCAAAGCGCTTTTCAACACTTTTTCGACTCGGAAGCTGATGTCAA ACAGCATGTCAAATACCTTCCGAAGTGGACCATGAACGTTTACACTGAGG AATACAGACCGGGTGACTTCCTCCTGCATATGGCTGGTAAGCTATACGAA GCAACTGTAGAAGGAGCGCTAGCCGTTGCACATCAGTTCGACATTCTATC TACCGTAGACAACAAGGATGACATTGAAGCATTCTTCCGAACTCAATACT TGTTCGGCACGTACAGTGGTCAATGCATACAGGATACCGACGAAGCAAGG GATTCAGAATGCAAACCAAACGATGACCGACGCCGCAAGTTGAAGGAGGC ATTGATTCTGATGTCGTCACCTTCTCGATATCGACATGTGGCGCTCAGGT ACTATTGGATGCCCGACTGGAAGGATGTGTACGACACGGAAGACTGGAAT CAAAACAGCGAGGCCTTCGAGGCGCAAAAACCACTGCCAGTGGAACGTGA CTACGACGAAGCGAGCGAATTGTTCGCCTTAGGCGGCACTCTGGAAGGCA TTGACGAAGAAGAGATGAACGGTGGATTCGAGACATTCGTGGGGTTAAAC GCTTCCATGCGTCGGTCTGGTGTCCCACGACCTTTAAGGGCTTGCGATCG CGTTGCGCTGGTGGCGCTCGCGCACGCTGCTTTCACTTTGGATGATCTTG ATGCTTCGTCTCTTACCCGTCGTCAGGTTATGGGTCCCTTCTGCCCGGAG AAGATAGAATTCAACACCGAGTCGCGTGAAATCCGCGCGTCGGACATTCA GATGGAGGACAAGGACTGTGAAGGTGACGGTATCATAACCATTCAATCAT TCGGATCTTCCGTTCCCGACAATGCATCCACCGCTGTCAAGTTCTTCTCC AGTCGCAACAATGACGTAGAAGGCTTTCTCGTCGGAACCCTTAGCGGTGG GAATATTGTTTGTGAGGCTTACAACCTTACTGATGGCGACGAACTCATCT TCCTCAAGCCTGATGAGGATGTTGAAGATATTGAATGGGTAGATGTATTT GGGGAAGAGACACCGCTCTCTAAAGATGATGACGATGACTTTGAATTAGA TGACAATGAGAGATATCTTATTGTTTCTAATCGCTGCTTCTACTCTGAAA CGGGACTTACGGATCGCGTGTGCTTCCCGGCTGATGCGCAGATTCGTCTG CAAGATGGATCTGTGCGCAGAATGGATGAAGTAAGCATCGGTGATAATGT GCAGGTGTCTCCAAACTCTTTCTCGCCTGTGTTTGCATGGACACATGCTG ATGCGCACACCAGGTACCGCTTTGTGCAACTTGTGACGGAGCGCGGCTCA ATCTCCCTAACTCCATCACATTACATCTACGCAGATGGCGTGGCCACTGC AGCTGGTAAGGTGAAAGTTGGAATGAAGCTTGAATGGAGAGATGGATCGC ATCAAACTGTTAGTGAGAAGAAGTATGTATGGAAGACTGGGTTGTACAAT CCACAAACCATTAACGGCGATATCGTGGTGAATGAGTTCGTGGTCACCAC GTATACGACGGCGTTAGAACCCAGCATGGCGCATGCGCTTCTGGCTCCGG TACGAGCAGCGTTCATGACGGTGAACAAGTTGTTCGCTGTCTCGCAGAAG AGCGGGCTGTGA back to topprotein sequence of Ggra2280.t1 >Ggra2280.t1 ID=Ggra2280.t1|Name=Ggra2280.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=754bp
MLSSLKRGGNCTVFLAALLLFTATDVQCFPSHSEKKIALLHLHDNAPFFA ELGALTLANKQRYATRHDYEMVSHTSSETRGLYRRAKCSDQGAVKRDDLC YVEDKSFQIDQRAPTFGKIKLALSACVGRKGYWLLWSDADAMIVNQTMPL THLIDDRYDLAITADWLMINAGVILFKCSKWTVGFLKRVYAAREFDNARA LDQSAFQHFFDSEADVKQHVKYLPKWTMNVYTEEYRPGDFLLHMAGKLYE ATVEGALAVAHQFDILSTVDNKDDIEAFFRTQYLFGTYSGQCIQDTDEAR DSECKPNDDRRRKLKEALILMSSPSRYRHVALRYYWMPDWKDVYDTEDWN QNSEAFEAQKPLPVERDYDEASELFALGGTLEGIDEEEMNGGFETFVGLN ASMRRSGVPRPLRACDRVALVALAHAAFTLDDLDASSLTRRQVMGPFCPE KIEFNTESREIRASDIQMEDKDCEGDGIITIQSFGSSVPDNASTAVKFFS SRNNDVEGFLVGTLSGGNIVCEAYNLTDGDELIFLKPDEDVEDIEWVDVF GEETPLSKDDDDDFELDDNERYLIVSNRCFYSETGLTDRVCFPADAQIRL QDGSVRRMDEVSIGDNVQVSPNSFSPVFAWTHADAHTRYRFVQLVTERGS ISLTPSHYIYADGVATAAGKVKVGMKLEWRDGSHQTVSEKKYVWKTGLYN PQTINGDIVVNEFVVTTYTTALEPSMAHALLAPVRAAFMTVNKLFAVSQK SGL* back to topmRNA from alignment at tig00000900_pilon:997439..1000144- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra2280.t1 ID=Ggra2280.t1|Name=Ggra2280.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2706bp|location=Sequence derived from alignment at tig00000900_pilon:997439..1000144- (Gracilaria gracilis GNS1m male) ATGCTCTCCAGTTTGAAGCGAGGAGGCAATTGCACCGTTTTCCTAGCGGC
GCTCCTGCTGTTCACTGCCACCGACGTGCAATGTTTTCCTTCTCACTCCG
AGAAGAAGATTGCTCTGCTTCACCTTCATGATAATGCACCATTCTTCGCT
GAACTGGGAGCTCTGACTCTGGCCAACAAGCAACGGTATGCCACCCGGCA
TGACTATGAGATGGTTTCACATACTTCGTCTGAAACACGTGGACTGTATC
GACGTGCCAAATGTTCGGATCAGGGCGCCGTGAAGCGGGATGATTTGTGC
TATGTTGAAGACAAGTCGTTTCAAATTGATCAGCGAGCGCCCACTTTTGG
GAAGATCAAGTTGGCGTTGTCCGCATGCGTTGGGAGAAAAGGATATTGGC
TGCTGTGGTCAGATGCGGATGCAATGATTGTGAATCAGACTATGCCTTTG
ACCCACCTGATTGATGATCGATACGATTTGGCTATCACCGCTGACTGGCT
TATGATAAATGCGGGCGTTATACTTTTCAAATGCTCCAAGTGGACTGTAG
GATTTCTCAAGCGCGTTTATGCAGCCAGGGAGTTTGATAATGCCCGCGCA
TTAGATCAAAGCGCTTTTCAACACTTTTTCGACTCGGAAGCTGATGTCAA
ACAGCATGTCAAATACCTTCCGAAGTGGACCATGAACGTTTACACTGAGG
AATACAGACCGGGTGACTTCCTCCTGCATATGGCTGGTAAGCTATACGAA
GCAACTGTAGAAGGAGCGCTAGCCGTTGCACATCAGTTCGACATTCTATC
TACCGTAGACAACAAGGATGACATTGAAGCATTCTTCCGAACTCAATACT
TGTTCGGCACGTACAGTGGTCAATGCATACAGGATACCGACGAAGCAAGG
GATTCAGAATGCAAACCAAACGATGACCGACGCCGCAAGTTGAAGGAGGC
ATTGATTCTGATGTCGTCACCTTCTCGATATCGACATGTGGCGCTCAGGT
ACTATTGGATGCCCGACTGGAAGGATGTGTACGACACGGAAGACTGGAAT
CAAAACAGCGAGGCCTTCGAGGCGCAAAAACCACTGCCAGTGGAACGTGA
CTACGACGAAGCGAGCGAATTGTTCGCCTTAGGCGGCACTCTGGAAGGCA
TTGACGAAGAAGAGATGAACGTTTCTCACGATGAGCTTTGAGTAAACGAA
AAATTGTGCAACGTGGCGTGCGAGAGCAATGGTTTGCTTACAAACGGCGC
GTCGAACCACGTCATCACAAGCTGCTACCCTTGTACATATGAGCGATCGA
CGATCGCCTAGGGTGGATTCGAGACATTCGTGGGGTTAAACGGTACGTTT
GAACGATATTGCTTCAAAATCTTCCACTTCCGCGTCTTGTTCAGCCCTAC
CTGTACACATGTAACGTCTTCATCTGTTCAACGTTACTTACCTCGCTCCC
GCCAACCCCTTCAAAAGCTTCCATGCGTCGGTCTGGTGTCCCACGACCTT
TAAGGGCTTGCGATCGCGTTGGTTCGTGTGTGAATGGCTCCGTTGTTGAA
GGCGATTGTTTATTGTTCTTCCGCCATCGTAGCTTGTTGCTTTTGTTTTC
CCTGACTTCACATTGTTCGCAACGACGGTAAACGTCGATAACGAGACTTG
CTAGTTGACGTGCATGAAATGCAGTTCGTTGTGTTTGTGTTCGCGCTAGC
GCTGGTGGCGCTCGCGCACGCTGCTTTCACTTTGGATGATCTTGATGCTT
CGTCTCTTACCCGTCGTCAGGTTATGGGTCCCTTCTGCCCGGAGAAGATA
GAATTCAACACCGAGTCGCGTGAAATCCGCGCGTCGGACATTCAGATGGA
GGACAAGGACTGTGAAGGTGACGGTATCATAACCATTCAATCATTCGGAT
CTTCCGTTCCCGACAATGCATCCACCGCTGTCAAGTTCTTCTCCAGTCGC
AACAATGACGTAGAAGGCTTTCTCGTCGGAACCCTTAGCGGTGGGAATAT
TGTTTGTGAGGCTTACAACCTTACTGATGGCGACGAACTCATCTTCCTCA
AGCCTGATGAGGATGTTGAAGATATTGAATGGGTAGATGTATTTGGGGAA
GAGACACCGCTCTCTAAAGATGATGACGATGACTTTGAATTAGATGACAA
TGAGAGATATCTTATTGTTTCTAATCGCTGCTTCTACTCTGAAACGGGAC
TTACGGATCGCGTGTGCTTCCCGGCTGATGCGCAGATTCGTCTGCAAGAT
GGATCTGTGCGCAGAATGGATGAAGTAAGCATCGGTGATAATGTGCAGGT
GTCTCCAAACTCTTTCTCGCCTGTGTTTGCATGGACACATGCTGATGCGC
ACACCAGGTACCGCTTTGTGCAACTTGTGACGGAGCGCGGCTCAATCTCC
CTAACTCCATCACATTACATCTACGCAGATGGCGTGGCCACTGCAGCTGG
TAAGGTGAAAGTTGGAATGAAGCTTGAATGGAGAGATGGATCGCATCAAA
CTGTTAGTGAGAAGAAGTATGTATGGAAGACTGGGTTGTACAATCCACAA
ACCATTAACGGCGATATCGTGGTGAATGAGTTCGTGGTCACCACGTATAC
GACGGCGTTAGAACCCAGCATGGCGCATGCGCTTCTGGCTCCGGTACGAG
CAGCGTTCATGACGGTGAACAAGTTGTTCGCTGTCTCGCAGAAGAGCGGG
CTGTGA back to topCoding sequence (CDS) from alignment at tig00000900_pilon:997439..1000144- >Ggra2280.t1 ID=Ggra2280.t1|Name=Ggra2280.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2262bp|location=Sequence derived from alignment at tig00000900_pilon:997439..1000144- (Gracilaria gracilis GNS1m male) ATGCTCTCCAGTTTGAAGCGAGGAGGCAATTGCACCGTTTTCCTAGCGGC GCTCCTGCTGTTCACTGCCACCGACGTGCAATGTTTTCCTTCTCACTCCG AGAAGAAGATTGCTCTGCTTCACCTTCATGATAATGCACCATTCTTCGCT GAACTGGGAGCTCTGACTCTGGCCAACAAGCAACGGTATGCCACCCGGCA TGACTATGAGATGGTTTCACATACTTCGTCTGAAACACGTGGACTGTATC GACGTGCCAAATGTTCGGATCAGGGCGCCGTGAAGCGGGATGATTTGTGC TATGTTGAAGACAAGTCGTTTCAAATTGATCAGCGAGCGCCCACTTTTGG GAAGATCAAGTTGGCGTTGTCCGCATGCGTTGGGAGAAAAGGATATTGGC TGCTGTGGTCAGATGCGGATGCAATGATTGTGAATCAGACTATGCCTTTG ACCCACCTGATTGATGATCGATACGATTTGGCTATCACCGCTGACTGGCT TATGATAAATGCGGGCGTTATACTTTTCAAATGCTCCAAGTGGACTGTAG GATTTCTCAAGCGCGTTTATGCAGCCAGGGAGTTTGATAATGCCCGCGCA TTAGATCAAAGCGCTTTTCAACACTTTTTCGACTCGGAAGCTGATGTCAA ACAGCATGTCAAATACCTTCCGAAGTGGACCATGAACGTTTACACTGAGG AATACAGACCGGGTGACTTCCTCCTGCATATGGCTGGTAAGCTATACGAA GCAACTGTAGAAGGAGCGCTAGCCGTTGCACATCAGTTCGACATTCTATC TACCGTAGACAACAAGGATGACATTGAAGCATTCTTCCGAACTCAATACT TGTTCGGCACGTACAGTGGTCAATGCATACAGGATACCGACGAAGCAAGG GATTCAGAATGCAAACCAAACGATGACCGACGCCGCAAGTTGAAGGAGGC ATTGATTCTGATGTCGTCACCTTCTCGATATCGACATGTGGCGCTCAGGT ACTATTGGATGCCCGACTGGAAGGATGTGTACGACACGGAAGACTGGAAT CAAAACAGCGAGGCCTTCGAGGCGCAAAAACCACTGCCAGTGGAACGTGA CTACGACGAAGCGAGCGAATTGTTCGCCTTAGGCGGCACTCTGGAAGGCA TTGACGAAGAAGAGATGAACGGTGGATTCGAGACATTCGTGGGGTTAAAC GCTTCCATGCGTCGGTCTGGTGTCCCACGACCTTTAAGGGCTTGCGATCG CGTTGCGCTGGTGGCGCTCGCGCACGCTGCTTTCACTTTGGATGATCTTG ATGCTTCGTCTCTTACCCGTCGTCAGGTTATGGGTCCCTTCTGCCCGGAG AAGATAGAATTCAACACCGAGTCGCGTGAAATCCGCGCGTCGGACATTCA GATGGAGGACAAGGACTGTGAAGGTGACGGTATCATAACCATTCAATCAT TCGGATCTTCCGTTCCCGACAATGCATCCACCGCTGTCAAGTTCTTCTCC AGTCGCAACAATGACGTAGAAGGCTTTCTCGTCGGAACCCTTAGCGGTGG GAATATTGTTTGTGAGGCTTACAACCTTACTGATGGCGACGAACTCATCT TCCTCAAGCCTGATGAGGATGTTGAAGATATTGAATGGGTAGATGTATTT GGGGAAGAGACACCGCTCTCTAAAGATGATGACGATGACTTTGAATTAGA TGACAATGAGAGATATCTTATTGTTTCTAATCGCTGCTTCTACTCTGAAA CGGGACTTACGGATCGCGTGTGCTTCCCGGCTGATGCGCAGATTCGTCTG CAAGATGGATCTGTGCGCAGAATGGATGAAGTAAGCATCGGTGATAATGT GCAGGTGTCTCCAAACTCTTTCTCGCCTGTGTTTGCATGGACACATGCTG ATGCGCACACCAGGTACCGCTTTGTGCAACTTGTGACGGAGCGCGGCTCA ATCTCCCTAACTCCATCACATTACATCTACGCAGATGGCGTGGCCACTGC AGCTGGTAAGGTGAAAGTTGGAATGAAGCTTGAATGGAGAGATGGATCGC ATCAAACTGTTAGTGAGAAGAAGTATGTATGGAAGACTGGGTTGTACAAT CCACAAACCATTAACGGCGATATCGTGGTGAATGAGTTCGTGGTCACCAC GTATACGACGGCGTTAGAACCCAGCATGGCGCATGCGCTTCTGGCTCCGG TACGAGCAGCGTTCATGACGGTGAACAAGTTGTTCGCTGTCTCGCAGAAG AGCGGGCTGTGA back to top
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