Ggra2131.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2131.t1
Unique NameGgra2131.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length240
Homology
BLAST of Ggra2131.t1 vs. uniprot
Match: A0A2V3J010 (Gamma-glutamylcyclotransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J010_9FLOR)

HSP 1 Score: 186 bits (471), Expect = 2.690e-54
Identity = 84/178 (47.19%), Postives = 123/178 (69.10%), Query Frame = 0
Query:    1 MGRRGTTGCNTATDAPNIEFTNAWTARLKNWQLCFHHRGHPPVDPSFASIRPSEGDDVHGLVYEIATSSAWERLMRSECVTRPAQRSSYVVKQVPVECFLSS--EESTIKLVYTLVTAPHKKIPRNLESYILPSRRYMSWLISGAKDEQLPRHYIDHLESLPVARGWNAPILEEMSMM 176
            MG RGT G N  +D   +E+++ W A L++W+LCFHHRG  P +P+FASIRP +G +V+G+VY I + ++WERL +SECV+   + S+Y + +V VECF +   +  TI+ VYT ++  HK +P   E  +LPS RYMSWLI+GA+ E+LP+ YI+ L+S+ VA  W    +EEM +M
Sbjct:   24 MGTRGTIGYNRTSDTVAVEYSDVWNAYLQDWELCFHHRGCAPAEPAFASIRPRKGGEVYGVVYRICSEASWERLKKSECVSGRPEMSAYSLVEVDVECFFAHTPDRKTIRRVYTFISTAHKVVPEWQEETVLPSPRYMSWLITGAEQERLPQSYIERLKSMAVASVWKGSCMEEMGLM 201          
BLAST of Ggra2131.t1 vs. uniprot
Match: A0A7S0J165 (Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J165_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 1.140e-9
Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = 0
Query:   26 ARLKNWQLCFHHRGHPPVDPSFASIRPSEGDDVHGLVYEIATSSAWERLMRSE--CVTRPAQRSSYVVKQVPVECFLSSEESTIKLVYTLVTAPHKKIPRNLESYILPSRRYMSWLISGAKDEQLPRHYIDHLESLPVA 162
            A ++N +L F+ R  PP++P+ ASI PS G    G+ Y ++ + A++ L RSE   + RP      V  ++P              V TL  AP  ++ R+     LPS RY + ++ GA++  L   Y++ L++LP A
Sbjct:   71 ATVRNHRLAFNMRMFPPLEPAMASIEPSVGHTCEGVCYTLS-ADAYDALWRSEGGSMARPGYEEVVVTAELP---------GGPAQVLTLRAAPWMRMQRDS----LPSLRYKTLILQGAREAGLSPAYVERLDALPAA 195          
BLAST of Ggra2131.t1 vs. uniprot
Match: A0A1Q9D147 (Gamma-glutamylcyclotransferase n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9D147_SYMMI)

HSP 1 Score: 62.8 bits (151), Expect = 6.740e-8
Identity = 49/164 (29.88%), Postives = 72/164 (43.90%), Query Frame = 0
Query:   18 IEFTNAWTARLKNWQLCFHHRGHPPVDPSFASIRPSEGDDVHGLVYEIATSSAWERLMRSECVTRPAQRSSYVVKQVPVECFLSS---------------------EESTIKLVYTLVTAPHKKIPRNLESYILPSRRYMSWLISGAKDEQLPRHYIDHLESLP 160
            ++ T    A    W+L F   G P ++PSFA++RPS+    HG+  E+   S W RL+ SE V   A+ +   ++QVP+E  L                         S  +  Y LV    +   + +     PS RY   L +GA+   L R Y D+L SLP
Sbjct:   93 LQPTQTLPAVADGWELWFSLAGVPFLEPSFATLRPSQNISTHGVCLELGRES-WIRLLVSEGVLGAAEVNELRLRQVPLEEILDRAAKRGQAVRGYRLLPIEVSMYSTSQRETAYALVDGDFESQTK-MPQVRPPSLRYWRLLRNGARRHGLTRDYRDYLASLP 254          
The following BLAST results are available for this feature:
BLAST of Ggra2131.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J0102.690e-5447.19Gamma-glutamylcyclotransferase n=1 Tax=Gracilariop... [more]
A0A7S0J1651.140e-931.65Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=... [more]
A0A1Q9D1476.740e-829.88Gamma-glutamylcyclotransferase n=5 Tax=Symbiodiniu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13772AIG2_2coord: 58..156
e-value: 1.3E-9
score: 38.4
NoneNo IPR availableGENE3D3.10.490.10coord: 10..175
e-value: 1.8E-26
score: 94.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..210
NoneNo IPR availableTMHMMTMhelixcoord: 184..206
IPR017939Gamma-glutamylcyclotransferasePANTHERPTHR12935UNCHARACTERIZEDcoord: 25..164
IPR013024Gamma-glutamyl cyclotransferase-likeCDDcd06661GGCT_likecoord: 26..98
e-value: 5.1731E-6
score: 41.9466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:386771..387604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2131.t1Ggra2131.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 386771..387604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2131.t1 ID=Ggra2131.t1|Name=Ggra2131.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=240bp
MGRRGTTGCNTATDAPNIEFTNAWTARLKNWQLCFHHRGHPPVDPSFASI
RPSEGDDVHGLVYEIATSSAWERLMRSECVTRPAQRSSYVVKQVPVECFL
SSEESTIKLVYTLVTAPHKKIPRNLESYILPSRRYMSWLISGAKDEQLPR
HYIDHLESLPVARGWNAPILEEMSMMSILQHERVVLMLCKLSMFASYFLP
VLFAFVLFAARKEPWESYQKLRKREMAPGTVHSSSVSNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017939G-Glutamylcylcotransferase
IPR013024GGCT-like