Ggra2249.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2249.t1
Unique NameGgra2249.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length922
Homology
BLAST of Ggra2249.t1 vs. uniprot
Match: A0A2V3IMI9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 2.500e-25
Identity = 78/224 (34.82%), Postives = 120/224 (53.57%), Query Frame = 0
Query:  307 LKPLTTTNELFQKVLDYRTYRLVDKSKRYSGSVARKVTKWAKRMQLTLTD-KFSGADPITVLRFLSQFRTACDQNGVHEGAALYLFQFFLSGQARDHVVAKFSGTNGPIDATDRELLRSYPEVVHYLLDTYATDDVIMDAHQDVISFRQSTNITESDFADQLWKKAYRCGNVFSEGRLKQHFIAGLLPAIRTHVRNHHTDHEKLSFHQLVTYAEGYGNTYRTSR 529
            LK L  TN L++++L YR YRL D S   +     ++    KR++LTL   +F+G DPI +L FL++F    D  G+ E  A     +FL G A D    +F+   G   AT+  +   +PE V YLL +YAT + I  A   +   RQ +  +E+ ++ +L K  +RCGNV+S       F+ GL P IRT V  H  D  ++++ +LV +A+  G+  R  +
Sbjct:  259 LKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAED----QFNSVRGSSRATEGGV-TCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRARK 477          
BLAST of Ggra2249.t1 vs. uniprot
Match: uncharacterized protein LOC123544193 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA69 (uncharacterized protein LOC123544193 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA69)

HSP 1 Score: 106 bits (264), Expect = 3.720e-20
Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 0
Query:  734 VCVLRKENYKVRMTIALRTSHARVVTSVLDTGAGPNLVHPKVLPYGWEDKVKMRKA-PRITDASRRPMAIKGIIPLFVQLGNLKVRTWFLVCPNLGVECILGTSFIDRYVKAIYPGLRKVAFNRPPPVALT 863
            V + +  NYK+ ++I    +    + +VLDTGAG NLV   VLP  WE  +    A PRIT+AS R M  +G+I L+VQ+GNL  R  F V P LGV CILG +FI+ +V+ I+P  R+V  N    +A+T
Sbjct:   54 VFLFKSHNYKLCVSIGATAAVLYPLQAVLDTGAGINLVRDDVLPENWERMLLPGVALPRITNASGRRMPARGVIILYVQVGNLVKRVRFYVTPGLGVPCILGCTFINLHVRNIHPKERRVDLNEGGSIAIT 184          
BLAST of Ggra2249.t1 vs. uniprot
Match: A0A1X6PAQ4 (CCHC-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAQ4_PORUM)

HSP 1 Score: 88.2 bits (217), Expect = 1.550e-14
Identity = 63/211 (29.86%), Postives = 95/211 (45.02%), Query Frame = 0
Query:  313 TNELFQKVLDYRTYRLVDKSKRYSGSVARKVTKWAKRMQLTL--TDKFSGADPITVLRFLSQFRTACDQNGVHEGAALYLFQFFLSGQARDHVVAKFSGTNGPIDATDRELLRSYPEVVHYLLDTYATDDVIMDAHQDVISFRQSTNITESDFADQLWKKAYRCGNVFSEGRLKQHFIAGLLPAIRTHVRNHHTDHEKLSFHQLVTYAEGY 521
            TN  ++ +L Y +Y +   S  Y   +  K  K  + +      T  F G DP+ +  FLS F+ ACD  G   G A  L  + L+G A+   VA  S      D   R  + +Y E V++LL  YAT D++ +A+  +I+ RQ        FAD+L +   R   +     +   F+ GL   I+ HV         LS  + VT A+ Y
Sbjct:  123 TNRRYRHLLSYESYFVNKTSLAYPPRLVDKADKINRALNGPFQGTKAFDGQDPLGIFGFLSTFKRACDSAGATHGQAFPLLSYRLAGDAKIAFVAACSTR----DTRHRFEINTYGEAVNWLLQKYATLDLLKEAYAAIIAARQEQEEAPRSFADRLERMCGRLDGLIRRSDIVDTFVNGLHETIKGHVVTFQMTKTSLSLPEAVTAAQIY 329          
BLAST of Ggra2249.t1 vs. uniprot
Match: uncharacterized protein LOC123544159 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE006 (uncharacterized protein LOC123544159 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE006)

HSP 1 Score: 78.6 bits (192), Expect = 8.930e-12
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
Query:  790 PRITDASRRPMAIKGIIPLFVQLGNLKVRTWFLVCPNLGVECILGTSFIDRYVKAIYPGLRKVAFNRPPPVALT 863
            PRIT+AS R M  +G+I L+VQ+GNL  R  F V P LGV CILG +FI+ +V++I+P  R+V  N    +A+T
Sbjct:    9 PRITNASGRRMPARGVIILYVQVGNLVKRVRFYVTPGLGVPCILGCTFINLHVRSIHPKERRVDLNEGGSIAIT 82          
The following BLAST results are available for this feature:
BLAST of Ggra2249.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IMI92.500e-2534.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
uncharacterized protein LOC123544193 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA693.720e-2044.27uncharacterized protein LOC123544193 n=1 Tax=Merce... [more]
A0A1X6PAQ41.550e-1429.86CCHC-type domain-containing protein n=1 Tax=Porphy... [more]
uncharacterized protein LOC123544159 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE0068.930e-1250.00uncharacterized protein LOC123544159 n=1 Tax=Merce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 893..921
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 659..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..717
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 756..841

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:881058..884022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2249.t1Ggra2249.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 881058..884022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2249.t1 ID=Ggra2249.t1|Name=Ggra2249.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=922bp
MDTDNLQKDDSRASQAGPSGTTTVPETIGLTADAISDRRSTRSHPQGRPM
TPLDNPERIGREPSLASRLRTRLDRINSQPATPTQDPVEVAPSVREDLSK
GLADVLWPQLRTLCEEHVQTLLDTRVPMVLEGMIDQRIHRLIPEVLESST
FVDAMASAIQMEVIRQVGPSALQATNQSNPSASVWQPHSEPPGVAALPAP
RRIDIQEDQMAVHPGSGREPPRQVGLMDAPPRRYQGSQQPRRPSGFGDEE
IAPLDRRSVDRRKKRSKKRDKKSRKRRDHSDDSDEDSSSDSSSSTDSDAD
EAAVRRLKPLTTTNELFQKVLDYRTYRLVDKSKRYSGSVARKVTKWAKRM
QLTLTDKFSGADPITVLRFLSQFRTACDQNGVHEGAALYLFQFFLSGQAR
DHVVAKFSGTNGPIDATDRELLRSYPEVVHYLLDTYATDDVIMDAHQDVI
SFRQSTNITESDFADQLWKKAYRCGNVFSEGRLKQHFIAGLLPAIRTHVR
NHHTDHEKLSFHQLVTYAEGYGNTYRTSRRAADIDARGRAFPLRKISKVH
MVNSSESESVGPMHSEEGDILAVSFSSVPSGAPSIPTTGTSTPSGQTAPR
YTFVQPRKDVFTRSGACFICLSTARPCDCMKFMPEDVRKNLLARRDENFQ
ARKSEGMYTRPYQKSSQSPGSNRYATPRETFRPQQVNAIDTTDVEPIPQE
SVGISSSSSSESDQPVDDWIEDLEEPSWDDQDPVCVLRKENYKVRMTIAL
RTSHARVVTSVLDTGAGPNLVHPKVLPYGWEDKVKMRKAPRITDASRRPM
AIKGIIPLFVQLGNLKVRTWFLVCPNLGVECILGTSFIDRYVKAIYPGLR
KVAFNRPPPVALTHKSGSDTTDDSDYRLGTVRILWSVDASESSEDDSAST
HPYGQWSNGPSAASALYGQSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf