Ggra8421.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8421.t1
Unique NameGgra8421.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length114
Homology
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BLAST of Ggra8421.t1 vs. uniprot
Match: A0A2V3ISB5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISB5_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 1.170e-37
Identity = 63/107 (58.88%), Postives = 91/107 (85.05%), Query Frame = 0 
Query:    6 SFLLLLGTGALILRPHDIPVMARAVGRAVVATVRSHRLAKNAAEDAIAENVKNAKDPNSELGMVGRGLRDFLSKFDAVTAAVRKDMADVPLSPRMWIQKGVRSLDQT 112
            SF++L+GTG L+LRP D P++AR  GR + ATVRS R+ K AAE+ +AEN+++A DPNSE+G+VGRGLRD L+KFD++ A ++KDM++VP+SPRM +QKG+RS+D++
Sbjct:    6 SFIVLIGTGILLLRPRDFPLIARGAGRLLGATVRSLRMTKQAAEEVVAENMQHANDPNSEMGLVGRGLRDSLTKFDSLAATLKKDMSNVPISPRMLLQKGMRSMDKS 112
The following BLAST results are available for this feature:
BLAST of Ggra8421.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISB51.170e-3758.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:548755..549096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8421.t1Ggra8421.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 548755..549096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8421.t1 ID=Ggra8421.t1|Name=Ggra8421.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=114bp
MNGTTSFLLLLGTGALILRPHDIPVMARAVGRAVVATVRSHRLAKNAAED
AIAENVKNAKDPNSELGMVGRGLRDFLSKFDAVTAAVRKDMADVPLSPRM
WIQKGVRSLDQTA*
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