Ggra4474.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4474.t1 vs. uniprot
Match: A0A2V3INV4 (Transcription initiation factor IIE subunit alpha n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INV4_9FLOR) HSP 1 Score: 639 bits (1649), Expect = 3.620e-228 Identity = 336/431 (77.96%), Postives = 371/431 (86.08%), Query Frame = 0
Query: 1 MAEVPREAVEFARRLVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGERPDGQFECTNMNSKALPCKGLIREQDNSAQIREMERLRNMIDEQLRTLRERADHCSRLDIPRHPLEGADEKTWGERVPETVGAHGERVDEDGIDMELRAEEEERRRGSDVIVLEPIQREQKDDAFIPEKPSWFKEGRGEEEEEWDDTEQHVLDNKAGTAASFAREEDEKAYYDMYVKQIHGAGTEARHVEDGRKAATENEVIDMDADDEVVAVESDAEAKV---ALDTVQNEDVMVSVAGKKMKLSQVTIEMAEQMTQDEYKTYYALAQPKNTMADEDDFDEFE 428
MAEVPREAVEFARRLVRAFYPDEFVVL+DAVLRQNNFVSHRDLA+RLRMQPKEMRQVLVRMEHARLM RDKREQKRITIRDGKKQTRAIQTDYWYVPL EMVDAFMYRVWRITKEL+EKR NVAE QKY+CTRCG FQL+DIL+G RPDGQFECTNMN++ALPC GLIREQDNSAQIREMERLRNMI+++LRTLRERADHCSRL+IPRHPLEGADEKTWGE VPETVGAHGERVDEDGID++L+ E E + DV+V+EPI RE+KDDAFIPEKPSWFKEG GE EWDDTEQHVLDNKAGTAASFAREEDEKAYYDMYV+QI+G T ++ D K A E +D+D +DEVV V ++ E + A +D MVSVAGK KLS+VT EM EQMT +EY Y+AL+QP N+ ADEDD DEFE
Sbjct: 1 MAEVPREAVEFARRLVRAFYPDEFVVLMDAVLRQNNFVSHRDLAHRLRMQPKEMRQVLVRMEHARLMHRDKREQKRITIRDGKKQTRAIQTDYWYVPLAEMVDAFMYRVWRITKELDEKRRNVAERQKYICTRCGAEFQLIDILAGSRPDGQFECTNMNARALPCGGLIREQDNSAQIREMERLRNMIEDELRTLRERADHCSRLEIPRHPLEGADEKTWGEHVPETVGAHGERVDEDGIDLQLKGEHGEGKNDPDVMVIEPIPRERKDDAFIPEKPSWFKEGGGEXXXEWDDTEQHVLDNKAGTAASFAREEDEKAYYDMYVQQIYGTATPSQDA-DASKTANEA-AVDLDGEDEVVEVVAENEKETTEGAQAEDDKQDAMVSVAGKMTKLSEVTTEMEEQMTAEEYAAYFALSQPNNS-ADEDD-DEFE 427
BLAST of Ggra4474.t1 vs. uniprot
Match: R7QIC0 (TFIIE domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIC0_CHOCR) HSP 1 Score: 342 bits (878), Expect = 3.110e-111 Identity = 198/415 (47.71%), Postives = 278/415 (66.99%), Query Frame = 0
Query: 15 LVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGER-PDGQFECTNM----NSKALPCKGLIREQDNSAQIREMERLRNMIDEQLRTLRERADHCSRLDIPRHPLEGADEKTWGERVPETVGAHGERVDEDGIDMELRAEEEERRRGSD----VIVLEPIQREQKDDAFIPEKPSWFKEGR--GEEEEEWDDTE---QHVLDNKAGTAASFAREEDEKAYYDMYVKQIHGAGTE---ARHVEDGRKAATENEVIDMDADDEVVAVESDAEAKVALDTVQNEDVMVSVAGKKMKLSQVTIEMAEQMTQDEYKTYYALA 412
LVR+FYP EFVVLLDAVLR NN+ +H DL+ RL++QPKE+RQ+LVRM HARLM +KR+QKRI ++D ++ TR + T++WYVPL ++VDAF YRV + E+++ R N Q C C ++L+++++ +R PDG + C M + + LPC G+IRE+DNSAQI+E ER++ +D++LR LRERA C+R+DIP HPLEGADE TWGE VPETVG HGE VDE+G+ E+ + E + ++ + L P E+K DA IPEKP WFK+ G+++++W + + Q++LD+K GTAAS +DEK YY+ Y++QI G A+ E G A I +D+ ++ E+ EA +D + EDV V VAGKKM LS+VT +M + MT DEY Y+ALA
Sbjct: 2 LVRSFYPSEFVVLLDAVLRHNNYCAHHDLSRRLKIQPKELRQILVRMVHARLMCNEKRQQKRINLKDERRATRLVNTEFWYVPLAQVVDAFQYRVHHLVTEIDQARANENAQQTVACDACRTAYELIEVIANDRTPDGNWVCDRMGVRRDRRKLPCGGVIREKDNSAQIKETERIKAKLDDELRVLRERAAQCARMDIPEHPLEGADEATWGELVPETVGIHGEAVDEEGLSKEIAEKLGESGKTAEPAGGLQGLAPAV-EKKGDAAIPEKPMWFKDSNQEGDDDDDWVEDQAATQNMLDSKTGTAASMV--DDEKQYYEKYMQQIAGEPVPVAVAKPKEAGNVARPAEATI-LDSGEK--GTEAPTEAVPPVDDDEPEDVAVYVAGKKMMLSEVTDDMHDLMTSDEYNAYFALA 410
BLAST of Ggra4474.t1 vs. uniprot
Match: general transcription factor IIE subunit 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE9D4 (general transcription factor IIE subunit 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE9D4) HSP 1 Score: 261 bits (668), Expect = 9.280e-80 Identity = 169/429 (39.39%), Postives = 249/429 (58.04%), Query Frame = 0
Query: 1 MAEVPREAVEFARRLVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGERPDGQ-FECTNMNSKALPCKGLIREQDNSAQIREMERLRNMIDEQLRTLRERADHCSRLDIPRHPLEGADEKTWGERVPETVGAHGERVDEDGIDMELRAEEEERRRGSDVIVLEPIQREQ-----KDDAFIPEKPSWFKEGRGEEEE---EWDDTEQHVLDNKA---GTAASFAREEDEKAYYDMYVKQIHGAGTEARHVEDGRKAAT--------ENEVIDMDA--DDEVVAVESDAEA-KVALDTVQNEDVMVSVAGKKMKLSQVTIEMAEQMTQDEYK 406
MAEVPREAVEF+R +VRAFYP EF V+ D VLR NNF +H LA+ LRM+PKE+RQ+L RM ARL+ +KR+QKRI +D K+ R + T++WYVPL+E++DAF YRV I+KE++ + +E +Y C C R++L+DI + P+ F C M C G+++E+DN + ++E E+ + +++LR +RE + CS + IP HPLEGADE+TW VPE +G HGE VDE+G+ E+ AE R +D I + Q + IPE+P WFKE + E+ +W++ + + GT SF + Y++ + G EA E AT E EV++ D D+++ EA V + E+V VSV G+K+ L+ +T E+ E+M+ DEY+
Sbjct: 1 MAEVPREAVEFSRMVVRAFYPVEFAVVADGVLRNNNFCAHSTLAHVLRMKPKELRQILTRMVAARLVCCEKRQQKRINYKDEKRPARIVNTEFWYVPLVELLDAFQYRVDIISKEIDLRIKKESELDRYQCQSCKQRYKLVDICTNFDPESNAFICDAMGLNRTICNGVVKEEDNRSILKETEKFKKKFEDELRPMRELSTACSGMKIPAHPLEGADEETWALYVPEIIGVHGEVVDEEGLTSEIAAEVNGRDPRADGIESQDGQLPMDAAGAEASGAIPERPDWFKEAAKDAEDMDDDWEEERDGISGSSKPAFGTGHSFG---ENNVDAQSYLRDM--LGVEAISNETANADATGSLEPIPDEAEVVNDDGKRDNDLGEDHDQFEAGAVQAGSSHVEEVFVSVQGEKIPLASITEELIEKMSADEYE 424
BLAST of Ggra4474.t1 vs. uniprot
Match: A0A8H3EWD9 (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3EWD9_9LECA) HSP 1 Score: 81.6 bits (200), Expect = 4.250e-13 Identity = 59/203 (29.06%), Postives = 100/203 (49.26%), Query Frame = 0
Query: 13 RRLVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGERPDGQFECTNMNSKALPCKGLIREQDNSAQIREMERLRNMIDEQLRTLRERADHCSRLDIPRHPLEGA 215
R + RAFY V+++DA+L ++ +++ DLA + MQ K++R+ L R++ ++M R R+G Q R + DY+YV +DA YRV+ +TK+++ E + Y C RC + +++L P+G FEC C G++ + +A + + QL TL + DIPR+ E A
Sbjct: 9 RSVARAFYETRQVLVIDALL-VHSALTNEDLALLMGMQQKDLRKSLGRLKEDKMMATYLTSHSRQETREG--QQRPVNKDYYYVDFHTTIDAIKYRVFNLTKKVQNMYQPSEERKDYHCPRCKANWTQIEVLDKFGPEG-FECHR-------CGGVLERDERAAGEATGHEKHSKLMSQLSTLLKLLQQIDEEDIPRNDFESA 200
BLAST of Ggra4474.t1 vs. uniprot
Match: A0A8J4PVX2 (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PVX2_9MYCE) HSP 1 Score: 80.5 bits (197), Expect = 1.050e-12 Identity = 53/210 (25.24%), Postives = 100/210 (47.62%), Query Frame = 0
Query: 10 EFARRLVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGERPDGQFECTNMNSKALPCKGLIREQDNSAQIREMERLRNMIDEQLRTLRERADHCSRLDIPRHPLEGADEKT 219
+ + ++R+FYPD+F V++DA+LR+ V LA LR+Q K +R++L+ ++ +++ + I K R WY+ ++D Y++W K++E + + Q Y CT C F DI P+G+ C + C G + E N+ + + + ++ + QL+ + E+ L IP + A+E +
Sbjct: 10 DLVKLVIRSFYPDDFAVIVDALLREKKRVRDEQLANTLRVQQKYVRKILLDLKGDSMVKSAD-----VKIEGTKPGERTTTQLLWYIDYKHIIDIVKYKLWMFGKKMESVKVQKIDVQTYRCTVCSKIFTAYDIPKLLSPEGELFCDD-------CDGELIEDHNNESLTQTAKHQSDLSSQLKKIVEQLKKTEGLQIPIFARDLAEESS 207
BLAST of Ggra4474.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CC89 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CC89) HSP 1 Score: 73.2 bits (178), Expect = 2.110e-10 Identity = 53/217 (24.42%), Postives = 101/217 (46.54%), Query Frame = 0
Query: 10 EFARRLVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEG-QKYVCTRCGGRFQLLDILSGERPDGQFECTNMNSKALPCKGLIREQDNSAQIREMERLRNMIDEQLRTLRERADHCSRLDIPRHPLEGADEKTWGERVP 225
+ + +VRAFYP++ +V+ DA+L++ DLA +LR+ + +R VL + + L+R + + + + R + WY+ ++D +R++ I K++EE+ N + Q Y C+ C F D P+G C + C G + E+++S + L++ R++AD L G +KT G+++P
Sbjct: 11 DLVKLIVRAFYPEDHIVVTDALLKEKKRFKDEDLATKLRLPTRIVRTVLSNLRNDCLIRSQE-----VKVEPKRPGDRITTANLWYIDYKFLIDVLKFRLYMIAKKIEEENANATDSNQHYRCSSCTKVFTTFDFARLLTPEGSLACDS-------CGGSLHEENSS-------------ENTLKSNRQKADQDQ-----LKKLIGQLKKTEGQQIP 197
BLAST of Ggra4474.t1 vs. uniprot
Match: D3BNZ0 (Transcription factor IIE n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BNZ0_POLPP) HSP 1 Score: 72.8 bits (177), Expect = 3.200e-10 Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 0
Query: 18 AFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGERP-DGQFECTNMNSKALPCKGLIREQDNS 175
AFY DE VV++DA+LR+ V DLA +LR+ K +R+VL +++ L++ + I + RA WY+ ++D YR+++I ++L+E++ + Q Y CT C F DI P +G EC C GL +E N+
Sbjct: 16 AFYHDEHVVVIDALLREKRRVRDEDLALKLRLPTKFVRKVLSDLKNDSLLKSQE-----IKVEPKGPGDRATNVVLWYLDYKYLIDVLKYRLYKIRQKLDEQKAKKLDLQSYRCTNCSKMFTAYDIPRLLNPMEGTLECDT-------CGGLPQEVINA 162
BLAST of Ggra4474.t1 vs. uniprot
Match: T2EA (General transcription factor IIE subunit 1 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=T2EA_DICDI) HSP 1 Score: 72.4 bits (176), Expect = 4.290e-10 Identity = 51/210 (24.29%), Postives = 101/210 (48.10%), Query Frame = 0
Query: 10 EFARRLVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGERPDGQFECTNMNSKALPCK---GLIREQDNSAQIREMERLRNMIDEQLRTLRERADHCSRLDIPRHPLEGAD 216
+ + ++RAFYPDE+ V++D +LR+ + DLA RLR+Q K +R++L+ ++ +++ + + R WY+ ++D Y+++ K++E + + Q Y C C + LDI + NM++ AL C+ G + E+ N+ + + + ++ + QLR + E+ +IP + AD
Sbjct: 13 DLVKMVIRAFYPDEYAVIIDGLLREKKRIKDEDLALRLRIQQKYVRKILMDLKGDSMVKSSD-----VKVEAKGPNERGSTHLLWYIDYKHIIDIVKYKLYMFRKKMESVKVQKIDVQTYKCQTCHKVYTALDIP---------KLLNMDTGALACEICDGELEEELNNESLTQTAKHQSDLFSQLRKIIEQLKKTEGHNIPLFARDLAD 208
BLAST of Ggra4474.t1 vs. uniprot
Match: F4QBS3 (Transcription factor IIE n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QBS3_CAVFA) HSP 1 Score: 70.1 bits (170), Expect = 2.540e-9 Identity = 46/168 (27.38%), Postives = 84/168 (50.00%), Query Frame = 0
Query: 10 EFARRLVRAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQ-TRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTRCGGRFQLLDILSGERPDGQFECTNMNSKALPCKGLIREQDNSA 176
+ R L+RAFY DE+++++DAVLRQ V ++A ++ + K R++L+ + +++ + ++ +GK RAI T WY+ ++D Y+++ + K +E ++ + Q Y C C F DI P+G C C G + E+ +SA
Sbjct: 42 DLVRMLIRAFYTDEYIIVIDAVLRQKKRVKEDEIANQINIPFKYCRKILMDLRGDSILKSQEVKE------EGKGPGDRAITTQLWYLDYSHIIDIIKYKMYMVRKMMEAEKTQKFDLQ-YKCVACAKLFSAYDIPQLLTPEGDLCCDR-------CDGKLTEEKSSA 195
BLAST of Ggra4474.t1 vs. uniprot
Match: W4GX50 (HTH TFE/IIEalpha-type domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX50_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.030e-8 Identity = 59/202 (29.21%), Postives = 98/202 (48.51%), Query Frame = 0
Query: 7 EAVEFARRLV-RAFYPDEFVVLLDAVLRQNNFVSHRDLAYRLRMQPKEMRQVLVRMEHARLMRRDKREQKRITIRDGKKQTRAIQTDYWYVPLLEMVDAFMYRVWRITKELEEKRHNVAEGQKYVCTR--CGGRFQLLDILSGERPD-GQFECTNMNSKALPCKGLIREQDN-------SAQIREMERLRNMIDEQLRTLRE 197
+AVE ++V RAFY DE VV+L+A++R+ ++ ++ + +Q K++R++ +E L+ R++ + KK A + YWY+ VD YR++ I L E E Q Y C CG + L+ P+ +F C + NSK L C R Q +AQ+ E L + I+E L+ ++E
Sbjct: 3 QAVENLVKIVGRAFYADEHVVVLEALIREK-YLKDDEMGNAVNLQTKQVRKICHDLEADHLVSREEL--------NDKKMGGASKATYWYIDYKYFVDVVRYRLYLIRTYLMEAESLEIERQTYRCDNDDCGREYTALEAQKLLTPEIHEFFCGHCNSKLLECDNNERLQSAQSLLKKYTAQVNRAEDLHDSINECLKKIQE 195 The following BLAST results are available for this feature:
BLAST of Ggra4474.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4474.t1 ID=Ggra4474.t1|Name=Ggra4474.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=429bpback to top |