Ggra4432.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4432.t1
Unique NameGgra4432.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:400673..401764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4432Ggra4432Gracilaria gracilis GNS1m malegenetig00000898_pilon 400673..401764 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4432.t1.start1Ggra4432.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000898_pilon 400673..400675 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4432.t1.CDS1Ggra4432.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000898_pilon 400673..401764 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4432.t1.exon1Ggra4432.t1.exon1Gracilaria gracilis GNS1m maleexontig00000898_pilon 400673..401764 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4432.t1.stop1Ggra4432.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000898_pilon 401762..401764 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4432.t1Ggra4432.t1Gracilaria gracilis GNS1m malepolypeptidetig00000898_pilon 400673..401764 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4432.t1 ID=Ggra4432.t1|Name=Ggra4432.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=364bp
MTEAVYSYISVAHGDEMPLSVKGRNRFLFQVANHFCKTQSAYCSGLWSFA
REVSAIPSRLWYSYIMDMASAFQIANWKVICSAESLSLREVFPMCNEYEK
MPVEVLECFKQETQNNISKDKRLSRREFLLAVRTPKVIEQVVYSRNRRAV
GPLKLTLSIGGVLECSASWTSVLNALGAVTSHEVVKKIRTNLISSREQTQ
RGAYEDRDNSDSVITIQVDNFDILPLHSVKAAGKRLPLVNGTVTQSIVWP
RKKQRVESTFVMDEESDNNWREPKEVLRDRSKFISSATCDESKEVLDDFA
SVVFGVVYKNRNELLGFPEVPSTFRKGNNEKPYKHQGVRLRTLLLSGFKH
HGGWDADDESLYE*
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spliced messenger RNA

>Ggra4432.t1 ID=Ggra4432.t1|Name=Ggra4432.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1092bp|location=Sequence derived from alignment at tig00000898_pilon:400673..401764+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGAGGCTGTATATTCGTATATTTCAGTAGCACATGGTGATGAAAT
GCCCCTTTCCGTTAAGGGGAGAAACCGATTCTTGTTTCAAGTTGCGAATC
ATTTCTGCAAGACTCAGAGTGCGTACTGTAGTGGGTTGTGGTCATTTGCT
CGCGAGGTATCGGCGATTCCTTCGAGACTCTGGTATTCCTACATAATGGA
TATGGCTTCTGCCTTTCAAATCGCAAACTGGAAAGTTATCTGTTCCGCTG
AAAGCCTATCTCTACGTGAAGTATTTCCAATGTGTAATGAGTACGAAAAG
ATGCCCGTTGAAGTCTTAGAATGCTTCAAACAGGAGACGCAAAATAATAT
ATCAAAGGACAAGCGGCTATCACGACGTGAATTTCTTCTGGCTGTCCGCA
CGCCCAAAGTTATTGAACAAGTTGTCTATTCTCGTAACAGACGAGCAGTC
GGGCCACTTAAATTAACTTTGTCGATAGGTGGGGTCTTAGAATGCAGCGC
GTCGTGGACTAGTGTTCTTAACGCGCTTGGAGCAGTTACGTCTCATGAAG
TTGTGAAGAAGATTCGAACTAATTTAATTTCAAGTCGTGAGCAAACCCAG
CGTGGCGCATATGAAGATAGGGACAATTCGGACAGCGTTATTACCATTCA
AGTTGATAACTTTGACATTTTGCCATTACACAGTGTTAAGGCCGCTGGAA
AACGACTTCCCTTGGTAAACGGGACGGTAACGCAAAGTATTGTATGGCCG
CGTAAGAAGCAAAGAGTTGAATCTACTTTTGTCATGGATGAAGAGAGCGA
CAACAATTGGCGAGAGCCTAAAGAGGTTTTGAGGGATCGTTCTAAGTTTA
TCTCATCGGCAACGTGTGATGAAAGTAAGGAAGTTCTCGACGACTTTGCT
AGTGTCGTATTTGGCGTTGTGTATAAGAATAGGAACGAGTTACTGGGCTT
CCCTGAAGTTCCGTCTACGTTTCGAAAAGGAAATAATGAAAAGCCCTACA
AACATCAGGGTGTTCGCTTGAGGACGTTGCTACTGTCCGGTTTTAAGCAT
CACGGAGGCTGGGACGCCGACGACGAGTCGCTTTACGAATAG
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protein sequence of Ggra4432.t1

>Ggra4432.t1 ID=Ggra4432.t1|Name=Ggra4432.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MTEAVYSYISVAHGDEMPLSVKGRNRFLFQVANHFCKTQSAYCSGLWSFA
REVSAIPSRLWYSYIMDMASAFQIANWKVICSAESLSLREVFPMCNEYEK
MPVEVLECFKQETQNNISKDKRLSRREFLLAVRTPKVIEQVVYSRNRRAV
GPLKLTLSIGGVLECSASWTSVLNALGAVTSHEVVKKIRTNLISSREQTQ
RGAYEDRDNSDSVITIQVDNFDILPLHSVKAAGKRLPLVNGTVTQSIVWP
RKKQRVESTFVMDEESDNNWREPKEVLRDRSKFISSATCDESKEVLDDFA
SVVFGVVYKNRNELLGFPEVPSTFRKGNNEKPYKHQGVRLRTLLLSGFKH
HGGWDADDESLYE*
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mRNA from alignment at tig00000898_pilon:400673..401764+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4432.t1 ID=Ggra4432.t1|Name=Ggra4432.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1092bp|location=Sequence derived from alignment at tig00000898_pilon:400673..401764+ (Gracilaria gracilis GNS1m male)
ATGACGGAGGCTGTATATTCGTATATTTCAGTAGCACATGGTGATGAAAT
GCCCCTTTCCGTTAAGGGGAGAAACCGATTCTTGTTTCAAGTTGCGAATC
ATTTCTGCAAGACTCAGAGTGCGTACTGTAGTGGGTTGTGGTCATTTGCT
CGCGAGGTATCGGCGATTCCTTCGAGACTCTGGTATTCCTACATAATGGA
TATGGCTTCTGCCTTTCAAATCGCAAACTGGAAAGTTATCTGTTCCGCTG
AAAGCCTATCTCTACGTGAAGTATTTCCAATGTGTAATGAGTACGAAAAG
ATGCCCGTTGAAGTCTTAGAATGCTTCAAACAGGAGACGCAAAATAATAT
ATCAAAGGACAAGCGGCTATCACGACGTGAATTTCTTCTGGCTGTCCGCA
CGCCCAAAGTTATTGAACAAGTTGTCTATTCTCGTAACAGACGAGCAGTC
GGGCCACTTAAATTAACTTTGTCGATAGGTGGGGTCTTAGAATGCAGCGC
GTCGTGGACTAGTGTTCTTAACGCGCTTGGAGCAGTTACGTCTCATGAAG
TTGTGAAGAAGATTCGAACTAATTTAATTTCAAGTCGTGAGCAAACCCAG
CGTGGCGCATATGAAGATAGGGACAATTCGGACAGCGTTATTACCATTCA
AGTTGATAACTTTGACATTTTGCCATTACACAGTGTTAAGGCCGCTGGAA
AACGACTTCCCTTGGTAAACGGGACGGTAACGCAAAGTATTGTATGGCCG
CGTAAGAAGCAAAGAGTTGAATCTACTTTTGTCATGGATGAAGAGAGCGA
CAACAATTGGCGAGAGCCTAAAGAGGTTTTGAGGGATCGTTCTAAGTTTA
TCTCATCGGCAACGTGTGATGAAAGTAAGGAAGTTCTCGACGACTTTGCT
AGTGTCGTATTTGGCGTTGTGTATAAGAATAGGAACGAGTTACTGGGCTT
CCCTGAAGTTCCGTCTACGTTTCGAAAAGGAAATAATGAAAAGCCCTACA
AACATCAGGGTGTTCGCTTGAGGACGTTGCTACTGTCCGGTTTTAAGCAT
CACGGAGGCTGGGACGCCGACGACGAGTCGCTTTACGAATAG
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Coding sequence (CDS) from alignment at tig00000898_pilon:400673..401764+

>Ggra4432.t1 ID=Ggra4432.t1|Name=Ggra4432.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1092bp|location=Sequence derived from alignment at tig00000898_pilon:400673..401764+ (Gracilaria gracilis GNS1m male)
ATGACGGAGGCTGTATATTCGTATATTTCAGTAGCACATGGTGATGAAAT
GCCCCTTTCCGTTAAGGGGAGAAACCGATTCTTGTTTCAAGTTGCGAATC
ATTTCTGCAAGACTCAGAGTGCGTACTGTAGTGGGTTGTGGTCATTTGCT
CGCGAGGTATCGGCGATTCCTTCGAGACTCTGGTATTCCTACATAATGGA
TATGGCTTCTGCCTTTCAAATCGCAAACTGGAAAGTTATCTGTTCCGCTG
AAAGCCTATCTCTACGTGAAGTATTTCCAATGTGTAATGAGTACGAAAAG
ATGCCCGTTGAAGTCTTAGAATGCTTCAAACAGGAGACGCAAAATAATAT
ATCAAAGGACAAGCGGCTATCACGACGTGAATTTCTTCTGGCTGTCCGCA
CGCCCAAAGTTATTGAACAAGTTGTCTATTCTCGTAACAGACGAGCAGTC
GGGCCACTTAAATTAACTTTGTCGATAGGTGGGGTCTTAGAATGCAGCGC
GTCGTGGACTAGTGTTCTTAACGCGCTTGGAGCAGTTACGTCTCATGAAG
TTGTGAAGAAGATTCGAACTAATTTAATTTCAAGTCGTGAGCAAACCCAG
CGTGGCGCATATGAAGATAGGGACAATTCGGACAGCGTTATTACCATTCA
AGTTGATAACTTTGACATTTTGCCATTACACAGTGTTAAGGCCGCTGGAA
AACGACTTCCCTTGGTAAACGGGACGGTAACGCAAAGTATTGTATGGCCG
CGTAAGAAGCAAAGAGTTGAATCTACTTTTGTCATGGATGAAGAGAGCGA
CAACAATTGGCGAGAGCCTAAAGAGGTTTTGAGGGATCGTTCTAAGTTTA
TCTCATCGGCAACGTGTGATGAAAGTAAGGAAGTTCTCGACGACTTTGCT
AGTGTCGTATTTGGCGTTGTGTATAAGAATAGGAACGAGTTACTGGGCTT
CCCTGAAGTTCCGTCTACGTTTCGAAAAGGAAATAATGAAAAGCCCTACA
AACATCAGGGTGTTCGCTTGAGGACGTTGCTACTGTCCGGTTTTAAGCAT
CACGGAGGCTGGGACGCCGACGACGAGTCGCTTTACGAATAG
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