Ggra4432.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4432.t1
Unique NameGgra4432.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Homology
BLAST of Ggra4432.t1 vs. uniprot
Match: A0A2V3IJH2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJH2_9FLOR)

HSP 1 Score: 281 bits (720), Expect = 2.510e-85
Identity = 148/369 (40.11%), Postives = 223/369 (60.43%), Query Frame = 0
Query:    2 TEAVYSYISVAHGDEMPLSVKGRNRFLFQVANHFCKTQSAYCSGLWSFAREVSAIPSRLWYSYIMDMASAFQIANWKVICSAESLSLREVFPMCNEYEKMPVEVLECFKQETQNNISKDKRLSRREFLLAVRTPKVIEQVVYSRNRRAVGPLKLTLSIGGVLECSASWTSVLNALGAVTSHEVVKKIRTNLISSREQTQRGAYEDRDNSDSVITIQVDNFDILPLHSVKAAGKRLPLVNGTVTQSIVWPRKKQRV----ESTFVMDEESD---NNWREPKEVLRDRSKFISSATCDESKEVLDDFASVVFGVVYKNRNELLGFPEVPSTFRKGNNEKPYKHQGVRLRTLLLSGFKHHGGWDADDESLYE 363
            ++++   + ++  DE+ L    R   L  V   F      + +G W  + EV AIP +LW + ++DMAS  Q+A WKV  +A     R +FP+ N+   +P E L  F    +++  K + +SR +F+L +R  KVIEQ+V SR+R  VGPL   LSI G++E +ASW SVL+ALG VTS++  +  R  LIS REQ +RGA++     D ++T+Q+DN D+LP+H+VKA G+ LP++ GT TQ I+  RK++RV    E++ + +   D   N W  PK++ +DR    +S    E +++L +F  +VFG+V +NR+ LL      S +R+G  E  YKHQG+  R LLLS FK HGG D +D SL+E
Sbjct:  213 SQSINGLMGISESDEVTLMPIKRRELLSAVDTRFLAKSKVFRNGSWLLSEEVQAIPQKLWTATLLDMASNKQLAVWKVEAAARKKKFRNIFPISNDARSLPAEQLNNFVAIFRSS-KKTELISRADFMLCMRVLKVIEQMVMSRSRVCVGPLTTMLSIAGIIEFTASWRSVLHALGLVTSYDRAETFRRRLISKREQAERGAFDSVRLEDRIVTVQLDNVDMLPVHNVKAFGESLPILIGTATQGIIQCRKRKRVNDSTETSTMTENRKDVNPNKWLRPKDIFKDRVSSAASFNSKEDRDILVEFCDLVFGIVLENRSRLLAVSHSKSMYRRGRKELEYKHQGIYFRLLLLSSFKQHGGADFEDPSLFE 580          
BLAST of Ggra4432.t1 vs. uniprot
Match: A0A2V3IY08 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY08_9FLOR)

HSP 1 Score: 286 bits (733), Expect = 2.150e-83
Identity = 149/365 (40.82%), Postives = 231/365 (63.29%), Query Frame = 0
Query:    9 ISVAHGDEMPLSVKGRNRFLFQVANHFCKTQSAYCSGLWSFAREVSAIPSRLWYSYIMDMASAFQIANWKVICSAESLSLREVFPMCNEYEKMPVEVLECFKQETQNNISKDKR-LSRREFLLAVRTPKVIEQVVYSRNRRAVGPLKLTLSIGGVLECSASWTSVLNALGAVTSHEVVKKIRTNLISSREQTQRGAYEDRDNSDSVITIQVDNFDILPLHSVKAAGKRLPLVNGTVTQSIVWPRKKQRVESTFVMDE---------ESDNNWREPKEVLRDRSKFISSATCDESKEVLDDFASVVFGVVYKNRNELLGFPEVPSTFRKGNNEKPYKHQGVRLRTLLLSGFKHHGGWDADDESLYE 363
            +++  G+ + +++K + + L +  N F +++  Y  G WS + E++A+P RLW S+I++MAS  Q+ +WKV  +A    + ++FP+ N++  +P E  + F Q+   +   D+  L R +FLL +R  KVIEQ+ YS++R  +GPL +TLSI G+ E S SWTSVL++LG  TS++ ++  + +LI+ REQ+ RGA+E  + +D +++IQ+DNFDILP HS+KA+GK LP+V+GT TQ IV  RK+ ++ S   ++          E+D +WR P  VL DR+ F SS      K +L+DF  +VFGVV   R++LLG     S F++     PYK+QGV  RTLLLS F  HGG D     L++
Sbjct:  405 MTLTKGESVTITLKEKRKMLAETGNRFMRSKEKYYRGDWSLSDEIAAVPPRLWASFILEMASEKQLLSWKVAAAAIGKKVVDMFPVLNDFTNIPREEFDNFAQQRFVHKRADETGLRRVDFLLCIRALKVIEQMTYSQSRLRIGPLTMTLSIAGIAESSPSWTSVLHSLGLATSYDAMESFKKSLIAKREQSTRGAFEGVNTTDRLVSIQLDNFDILPFHSMKASGKALPMVSGTATQGIVQSRKRPKLHSAVGINRSTEEPGALVEADTSWRSPSTVLVDRATFSSSFNSVADKNILEDFYDMVFGVVLSRRDDLLG-SSASSQFQRRTATLPYKNQGVNFRTLLLSCFSPHGGSDRSAPYLFD 768          
BLAST of Ggra4432.t1 vs. uniprot
Match: A0A2V3IKL7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL7_9FLOR)

HSP 1 Score: 180 bits (457), Expect = 4.450e-47
Identity = 102/273 (37.36%), Postives = 151/273 (55.31%), Query Frame = 0
Query:   91 VFPMCNEYEKMPVEVLECFKQETQNNISKDKRLSRREFLLAVRTPKVIEQVVYSRNRRAVGPLKLTLSIGGVLECSASWTSVLNALGAVTSHEVVKKIRTNLISSREQTQRGAYEDRDNSDSVITIQVDNFDILPLHSVKAAGKRLPLVNGTVTQSIVWPRKKQRVESTFVMDEESDNNWREPKEVLRDRSKFISSATCDESKEVLDDFASVVFGVVYKNRNELLGFPEVPSTFRKGNNEKPYKHQGVRLRTLLLSGFKHHGGWDADDESLYE 363
            +FP+CN  E  P + +E   Q    + S DK +S  + +LAV+   VIEQV +SR     GP+   +SI  +LE + SWTS LNALG  TS++ +++ +  L S  E   R A  D   SD ++T+Q+DN+D++PLHSVK AGK+ P+++GT TQ ++  R+             + + W++PK VL  R  FI     +++KE L  F  VV+G  Y  R  LL     P  ++ G++       G+  RT+LLS FK HGG   +D  L E
Sbjct:    1 MFPVCNCIEHRPNDSIESELQLGSLHQSLDKEVSVCDAVLAVKVLTVIEQVAFSRTESCAGPITTCMSIADILENTPSWTSFLNALGIKTSYDTLERYKNRLASDHESAPRRALSDVPLSDGLLTVQIDNYDVMPLHSVKIAGKKNPVISGTATQGVLRKRRWGATRDENFSKFTTYSQWQDPKRVLGTRENFIGELVSEDAKEALQAFYDVVYGKFYAERGRLLR----PGHYKAGSDSAS---GGLNFRTMLLSCFKEHGGVSRNDPLLLE 266          
The following BLAST results are available for this feature:
BLAST of Ggra4432.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IJH22.510e-8540.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY082.150e-8340.82Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IKL74.450e-4737.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:400673..401764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4432.t1Ggra4432.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 400673..401764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4432.t1 ID=Ggra4432.t1|Name=Ggra4432.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MTEAVYSYISVAHGDEMPLSVKGRNRFLFQVANHFCKTQSAYCSGLWSFA
REVSAIPSRLWYSYIMDMASAFQIANWKVICSAESLSLREVFPMCNEYEK
MPVEVLECFKQETQNNISKDKRLSRREFLLAVRTPKVIEQVVYSRNRRAV
GPLKLTLSIGGVLECSASWTSVLNALGAVTSHEVVKKIRTNLISSREQTQ
RGAYEDRDNSDSVITIQVDNFDILPLHSVKAAGKRLPLVNGTVTQSIVWP
RKKQRVESTFVMDEESDNNWREPKEVLRDRSKFISSATCDESKEVLDDFA
SVVFGVVYKNRNELLGFPEVPSTFRKGNNEKPYKHQGVRLRTLLLSGFKH
HGGWDADDESLYE*
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