Ggra4475.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4475.t2
Unique NameGgra4475.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length81
Homology
BLAST of Ggra4475.t2 vs. uniprot
Match: A0A2V3IR05 (Mitochondrial import inner membrane translocase subunit TIM10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR05_9FLOR)

HSP 1 Score: 144 bits (363), Expect = 1.510e-43
Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    1 MNVPQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGE-LVRDNRCVGKYVEATNKVGEVMQQLQQGQAPQ 80
            MN+PQ QGNLDAMK EMIFVADLFN+MSE CFKKCVPRFHDGDLNTGE +V  +RCVGKYVEATNKVGEVMQQLQQGQAPQ
Sbjct:    1 MNMPQGQGNLDAMKAEMIFVADLFNKMSEMCFKKCVPRFHDGDLNTGEPVVCADRCVGKYVEATNKVGEVMQQLQQGQAPQ 81          
BLAST of Ggra4475.t2 vs. uniprot
Match: M2Y0K8 (Mitochondrial protein translocase, MPT family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0K8_GALSU)

HSP 1 Score: 97.1 bits (240), Expect = 9.140e-25
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    7 QGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQQG 76
            Q  LDA KTEM F AD+FN+M++ CFKKC+P++++GDLNTGE+V  +RCV KY E T KVGEV+Q   QG
Sbjct:    5 QSALDAAKTEMNFYADMFNKMADQCFKKCIPKYNEGDLNTGEMVCVDRCVAKYFEVTQKVGEVLQGSMQG 74          
BLAST of Ggra4475.t2 vs. uniprot
Match: A0A067C982 (zf-Tim10_DDP domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C982_SAPPC)

HSP 1 Score: 83.6 bits (205), Expect = 4.390e-19
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    5 QQQGN--LDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQ 74
            QQQG   +   K EM    DLFNRM+E CFKKC  RFHD DLN GE+   +RCVGKY++A ++VGE MQ++Q
Sbjct:   32 QQQGPSPVAMAKVEMAMYTDLFNRMAEMCFKKCNYRFHDADLNVGEMSCVDRCVGKYMQAHHQVGETMQRVQ 103          
BLAST of Ggra4475.t2 vs. uniprot
Match: W4GXE3 (zf-Tim10_DDP domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4GXE3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.180e-17
Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQ 74
            P     +   K EM    DLFN+M+E CFKKC  RFHD DLN GE+   +RCVGKY++A  +VG  MQ++Q
Sbjct:   11 PVMDQQMQMAKVEMEMYTDLFNKMAEVCFKKCNYRFHDADLNVGEMSCVDRCVGKYMQAHLQVGTTMQRVQ 81          
BLAST of Ggra4475.t2 vs. uniprot
Match: A0A6G0XB81 (zf-Tim10_DDP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XB81_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.260e-17
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQQ 75
            P     +   K EM    DLFN+M+E CFKKC  RFHD +LN GE+   +RCVGKY++A  +VG+ MQ++Q+
Sbjct:   12 PAMNEQMQMAKVEMEMYTDLFNKMAEVCFKKCNYRFHDAELNVGEMSCVDRCVGKYMQAHLQVGKTMQRVQE 83          
BLAST of Ggra4475.t2 vs. uniprot
Match: M1VG23 (Mitochondrial intermembrane space complex subunit Tim10 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG23_CYAM1)

HSP 1 Score: 76.6 bits (187), Expect = 1.220e-16
Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   10 LDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQ 74
            +D  + EM F ADLF +M+++CF+KCV R+HDG+L TGE V  +RCV KY+ A  ++GE++Q+ Q
Sbjct:   12 VDLARREMSFYADLFQKMTDSCFRKCVTRYHDGELQTGEGVCVDRCVFKYMGAVQRIGELLQEGQ 76          
BLAST of Ggra4475.t2 vs. uniprot
Match: A0A418AMM4 (zf-Tim10_DDP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AMM4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.510e-16
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQ 74
            P     +   K EM    DLFN+M+E CFKKC  RFHD +LN GE+   +RCVGKY++A  +VG+ MQ++Q
Sbjct:   44 PVMDQQMQMAKVEMEMYTDLFNKMAEVCFKKCNYRFHDAELNVGEMSCVDRCVGKYMQAHLQVGKTMQRVQ 114          
BLAST of Ggra4475.t2 vs. uniprot
Match: A0A1X6P277 (zf-Tim10_DDP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P277_PORUM)

HSP 1 Score: 74.3 bits (181), Expect = 8.750e-16
Identity = 36/71 (50.70%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    7 QGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQQGQ 77
            Q  +D  + EM F  DLFNRM + CFKKCVPRFHD +LNTGE V              KVGE++Q  QQ Q
Sbjct:    2 QNQMDVARMEMQFYTDLFNRMVDGCFKKCVPRFHDAELNTGEQVCXXXXXXXXXXXXXKVGEILQSEQQAQ 72          
BLAST of Ggra4475.t2 vs. uniprot
Match: A0A7J7ID20 (Mitochondrial import inner membrane, translocase subunit n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ID20_9RHOD)

HSP 1 Score: 74.3 bits (181), Expect = 4.870e-15
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   10 LDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQ 74
            +D  + EM F ADLF +M+++CF+KCV R+HD +L TGE V  +RCV KY+ A  ++GE++Q+ Q
Sbjct:   74 VDLARREMSFYADLFQKMTDSCFRKCVTRYHDAELQTGEGVCVDRCVFKYMGAVQRIGELLQEGQ 138          
BLAST of Ggra4475.t2 vs. uniprot
Match: A0A6U0JD31 (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JD31_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.960e-15
Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFH-DGDLNTGELVRDNRCVGKYVEATNKVGEVMQQLQQGQAPQ 80
            PQ    L A  +EM   ADLF ++S TCF+KC  R H DGDL  GE+   +RCV KY+EA  KVG V+Q+  + QA Q
Sbjct:   11 PQGPDPLFAATSEMEMYADLFQKISGTCFEKCASRRHRDGDLALGEMACTDRCVSKYMEAMEKVGVVLQKANEQQAQQ 88          
The following BLAST results are available for this feature:
BLAST of Ggra4475.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR051.510e-4387.65Mitochondrial import inner membrane translocase su... [more]
M2Y0K89.140e-2561.43Mitochondrial protein translocase, MPT family n=1 ... [more]
A0A067C9824.390e-1956.94zf-Tim10_DDP domain-containing protein n=4 Tax=Sap... [more]
W4GXE33.180e-1750.70zf-Tim10_DDP domain-containing protein n=3 Tax=Aph... [more]
A0A6G0XB813.260e-1748.61zf-Tim10_DDP domain-containing protein n=1 Tax=Aph... [more]
M1VG231.220e-1650.77Mitochondrial intermembrane space complex subunit ... [more]
A0A418AMM41.510e-1649.30zf-Tim10_DDP domain-containing protein n=2 Tax=Aph... [more]
A0A1X6P2778.750e-1650.70zf-Tim10_DDP domain-containing protein n=1 Tax=Por... [more]
A0A7J7ID204.870e-1549.23Mitochondrial import inner membrane, translocase s... [more]
A0A6U0JD315.960e-1550.00Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810Mitochondrial import inner membrane translocase subunit tim13 like domainscoord: 6..79
e-value: 1.0E-18
score: 68.6
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 19..77
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 17..72
e-value: 1.7E-14
score: 53.1
IPR027100Mitochondrial import inner membrane translocase subunit Tim10PANTHERPTHR11038:SF16MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 5..75
NoneNo IPR availablePANTHERPTHR11038MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 5..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:604254..604880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4475.t2Ggra4475.t2Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 604254..604880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4475.t2 ID=Ggra4475.t2|Name=Ggra4475.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=81bp
MNVPQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELV
RDNRCVGKYVEATNKVGEVMQQLQQGQAPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035427Tim10-like_dom_sf
IPR004217Tim10-like
IPR027100Tim10