Ggra8480.t3 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8480.t3
Unique NameGgra8480.t3
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length339
Homology
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BLAST of Ggra8480.t3 vs. uniprot
Match: A0A2V3ITE0 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITE0_9FLOR)

HSP 1 Score: 454 bits (1167), Expect = 5.660e-155
Identity = 238/322 (73.91%), Postives = 259/322 (80.43%), Query Frame = 0 
Query:   15 DDDSPWTHVWRSASELSESIVEMGQEAAAAVGGQFAGLLKPGGARVRPPQVITRLAVPGMCLALSQLSPDSAGSDA-SXXXXXXXXXXXXXXXXXXXSSQERSSSGLGAELAHRGKRGAVVSEKPRLDLLFVFDASGALSWRDYRRMKEILSTPGGVIDNVQKQVHDGSRMGFVEYAYDSVVVSELDRDLDAVRRRILSSFQGDANNWDTNDMYIYEVGDQMWGNALRKVDSLVNDPGKNNDIQTI-----SEGDIEEPPTVQATEVPPAMNGMCREAHLALKWSRYEMIPPAANKHIQSQLLNAQRLRRVVLINAGELTKG 330
            DD+SPW  VWRSASEL ESIVEMGQE AA+VGGQFAGLL+PG ARVRPPQVITRLA+PGMC+ALSQLSPDS  SDA S                   SSQE SS+ +  E      R  + + KPRLDLLFVFDASGA+SWRDYR++KEILS+PGG+IDNVQ +VHDGSR+GFVEYAYDSVVVSELDRD DAVRRRILSSFQGDANNWD+N+MYIYEVGD +WGNALRKVDSLVN  G+     T      SEGDIEE P VQATEVPPAMNGMCRE HLALKWSRYE+IPPAANKHIQSQL NAQRLRRVVL N GELTKG
Sbjct:   60 DDESPWGQVWRSASELPESIVEMGQEVAASVGGQFAGLLRPGAARVRPPQVITRLAIPGMCMALSQLSPDSIESDAMSSNSGQSSEPPSFRSSRVSSSSQEHSSAVMRMETVSDKTRRNLAAYKPRLDLLFVFDASGAMSWRDYRKLKEILSSPGGIIDNVQSRVHDGSRIGFVEYAYDSVVVSELDRDSDAVRRRILSSFQGDANNWDSNNMYIYEVGDVIWGNALRKVDSLVNSNGRTGSSLTSGMGASSEGDIEESPIVQATEVPPAMNGMCREVHLALKWSRYEIIPPAANKHIQSQLQNAQRLRRVVLFNGGELTKG 381
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BLAST of Ggra8480.t3 vs. uniprot
Match: R7QCF8 (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCF8_CHOCR)

HSP 1 Score: 381 bits (978), Expect = 9.460e-120
Identity = 207/342 (60.53%), Postives = 244/342 (71.35%), Query Frame = 0 
Query:    3 SRVSFETDDDDGDDDSPWTHVWRSASELSESIVEMGQEAAAAVGGQFAGLLKPGGARVRPPQVITRLAVPGMCLALSQLSPDSAGSDASXXXXXXXXXXXXXXXXXXXSSQERSSSGLGAELAHRG----KRGAVVSEKPRLDLLFVFDASGALSWRDYRRMKEILSTPGGVIDNVQKQVHDGSRMGFVEYAYDSVVVSELDRDLDAVRRRILSSFQGDANNWDTNDMYIYEVGDQMWGNALRKVDSLVNDPGKN-------NDIQTISEGDIEEPPTVQATEVPPAMNGMCREAHLALKWSRYEMIPPAANKHIQSQLLNAQRLRRVVLINAGELTKGAKT 333
            S  + E ++ D DDDSPW  VW+SASEL E +V  G+  AA VGGQFAGL KPG ARVRPPQVITRLAVPGMC+ALSQL     GSD                     SS E +S       +  G    K G +  + P++DLLFVFDASG+LSWR+YR+MKE+L+ PGG++D++  + H GSR+GFVEYAYDSVVVSELDRD +AVRRRILSSFQGDANNWD + MYIYEVG+++ GNALRKVDSLV     N        D+   SEGDIEEPPTVQA EVPPAMNGM RE HLALKWSR+EM+PP  NKHIQ+Q+  A RLRRVV+INAGE TKG ++
Sbjct:  695 SGYTSEREERDLDDDSPWDQVWKSASELPEMVVAAGEAVAAKVGGQFAGLFKPGAARVRPPQVITRLAVPGMCMALSQLP----GSDMMASASANSSELRSFKSSRFPSSHEATSGTKSGSPSENGVGSLKTGCL--DGPKVDLLFVFDASGSLSWREYRQMKEVLTKPGGLLDDLMSKTHSGSRVGFVEYAYDSVVVSELDRDEEAVRRRILSSFQGDANNWDRDGMYIYEVGEEVGGNALRKVDSLVGRSSDNIMEADQGMDVLE-SEGDIEEPPTVQAKEVPPAMNGMSREVHLALKWSRFEMLPPVVNKHIQAQVQKAGRLRRVVVINAGEFTKGGQS 1029
The following BLAST results are available for this feature:
BLAST of Ggra8480.t3 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITE05.660e-15573.91VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
R7QCF89.460e-12060.53VWFA domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 130..275
e-value: 3.9E-7
score: 31.8
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 132..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableCDDcd00198vWFAcoord: 140..259
e-value: 1.87945E-5
score: 42.553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:833318..834428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8480.t3Ggra8480.t3Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 833318..834428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8480.t3 ID=Ggra8480.t3|Name=Ggra8480.t3|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=339bp
MSSRVSFETDDDDGDDDSPWTHVWRSASELSESIVEMGQEAAAAVGGQFA
GLLKPGGARVRPPQVITRLAVPGMCLALSQLSPDSAGSDASSTSAQSSDS
PSFPSLSASSSSQERSSSGLGAELAHRGKRGAVVSEKPRLDLLFVFDASG
ALSWRDYRRMKEILSTPGGVIDNVQKQVHDGSRMGFVEYAYDSVVVSELD
RDLDAVRRRILSSFQGDANNWDTNDMYIYEVGDQMWGNALRKVDSLVNDP
GKNNDIQTISEGDIEEPPTVQATEVPPAMNGMCREAHLALKWSRYEMIPP
AANKHIQSQLLNAQRLRRVVLINAGELTKGAKTLSYRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf