Ggra4561.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4561.t1
Unique NameGgra4561.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length266
Homology
BLAST of Ggra4561.t1 vs. uniprot
Match: A0A2V3J4C2 (Peroxisomal membrane protein 11-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4C2_9FLOR)

HSP 1 Score: 230 bits (587), Expect = 3.220e-72
Identity = 122/248 (49.19%), Postives = 166/248 (66.94%), Query Frame = 0
Query:    9 SPLVIDTWHRALSNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLM-RIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGLFSTVVTLMEIRRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQRCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSSAVGCWQTWP 255
            SPL ++TWHRALSN+EGRDKL RL QY CKLLRG++Q   N   TS S   L+A+ESA++TSRQI RLLKWTS+Y KRR        +SS +  N++SD+ALF YYLCDN+TFLCKTGVI  D  +ASRRAARFWM S+++G+  T+ +L++IRR+  + R  L +++++Q     + E           + +     LQR   V   KQ++D+++S SLS +  +H A+ G CGVVSS + C Q WP
Sbjct:   10 SPLCMETWHRALSNAEGRDKLLRLAQYSCKLLRGIEQ---NKPFTSSSSRTLLALESALSTSRQIGRLLKWTSIYAKRRSTSSPSAASSSQQTLNVLSDVALFGYYLCDNLTFLCKTGVIGGDVGRASRRAARFWMASILTGMIGTLFSLLQIRRQAILLRRTLSQSDDKQSSASRVCE-----------RNLRTYGALQRTRCVTLMKQVADVIISMSLSQEKPMHNAITGTCGVVSSTIACSQIWP 243          
BLAST of Ggra4561.t1 vs. uniprot
Match: M2XP25 (Peroxisomal biogenesis factor 11 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XP25_GALSU)

HSP 1 Score: 123 bits (309), Expect = 1.640e-30
Identity = 79/249 (31.73%), Postives = 127/249 (51.00%), Query Frame = 0
Query:   14 DTWHRALSNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDL---MRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGLFSTVVTLMEIRRR----HRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQRCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSSAVGCWQTWP 255
            +TW   LS +EGRDKL+R +QY CKL+RGV     + +  S      +A+E  +  +RQ+ RL KW +++ KR       ++  NS      L++DL  F Y+  DN   LCKT +  RDA+    R  RF++L+V++G   ++     +R++    +   R  +L+T +  +   G              +E+  L + Q+ A+V   +   D+VV  S+S +  L   L G CGV+SS V  +Q WP
Sbjct:   13 ETWKILLSQTEGRDKLYRTLQYACKLVRGVDAGSSSLSKKS------LALEQILGNARQVLRLAKWVNIWSKRIGQTSFGLKGQNSIGATLQLLNDLGNFLYFAFDNYALLCKTILDGRDANAYQLRGKRFFLLAVIAGFLDSLWKFRNVRKQLSLLYERERSTMLETSSSDKRDSGN-----------TSRELQTLQKQQQEAIVGIVRYGFDIVVGISISRKEQLSPTLTGFCGVISSLVAWYQVWP 244          
BLAST of Ggra4561.t1 vs. uniprot
Match: A0A5J4YT20 (Peroxisomal membrane protein 11D n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT20_PORPP)

HSP 1 Score: 109 bits (272), Expect = 3.580e-25
Identity = 79/243 (32.51%), Postives = 130/243 (53.50%), Query Frame = 0
Query:   20 LSNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSA---LMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSS-VEISNLISDLALFAYYLCDNVTFLCKTGVIKR-DASKASRRAARFWMLSVMSGLFSTVVTLMEIRRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQRCAMVACTKQLSDLVVSCSLST--QGGLHTALVGGCGVVSSAVGCWQTWP 255
            L  + GRDKLFRL+Q++ +L+RG          TSGS S     + VE  +++SRQ  RL K+ +V       + R+ + + V++   ++DLA+  +++ DN+++LCK  +  R DA++ SRRA RFW L+    + + VV L+ +R+              Q+Q  E   +A        A  EM  + + QR  M+  ++ + DL +S S++   +     +L G CGV+SS +GCWQ WP
Sbjct:   26 LGKTNGRDKLFRLLQFLARLVRG----------TSGSVSVQQTALHVEMTLSSSRQTFRLFKFLNVLAANM--VYRVDHGALVDVIQSLADLAIAMWFVLDNMSWLCKAKLFARGDAAQFSRRAGRFWFLN---SVLNVVVKLLMLRQL-------------QEQAAESRAKADASQVGEPARAEMKLVEKQQRLCMLDLSRSVLDLPISYSMTQLPKQQFSPSLTGACGVISSVIGCWQQWP 240          
BLAST of Ggra4561.t1 vs. uniprot
Match: A0A7S0G972 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G972_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 1.320e-23
Identity = 72/240 (30.00%), Postives = 120/240 (50.00%), Query Frame = 0
Query:   16 WHRALSNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGLFSTVVTLMEIRRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQRCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSSAVGCWQTWP 255
            W   LS++ GRDK  R VQY CK+ R          T S      + +ESA++ +RQ  RL  W +V + ++H++ +     +E    ++DL +F +++ DNVTF  + G++K D ++   RAA+ W+LS  S L +  +      R +R+  E       + QD         D TR         ++R ++  +++  + L D VV+ S+S    L + LVG CGV+SS +  +  WP
Sbjct:   18 WTTHLSDTNGRDKALRTVQYACKIAR--MHPNARVVTRS------LQLESALSLARQAFRLGNWVNV-ISKQHNMTQDEGPLLEALTALADLGIFCFFILDNVTFSIRAGLVKGDRNRMMSRAAKCWVLSATSNLTAACL------RLYRVYAE-------KPQDA--------DRTR---------VLRKRKALLLSAIRFLCDDVVAISISRTTPLSSGLVGACGVLSSLIQSYNLWP 218          
BLAST of Ggra4561.t1 vs. uniprot
Match: M2Y7D1 (Peroxisomal biogenesis factor 11 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7D1_GALSU)

HSP 1 Score: 70.9 bits (172), Expect = 6.030e-11
Identity = 58/250 (23.20%), Postives = 108/250 (43.20%), Query Frame = 0
Query:   13 IDTWHRALSNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGLFSTVVTLMEI--RRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQRCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSSAVGCWQTWPVDEVI 260
            ++TW   L++ + RDK++R +QY+CKL  G+      T         +  +   ++++RQ+ RL K   V+ K R     +   S  +  L SD +   Y+L DN+ +L ++G+I        R+A  F++      L      L++I    RH  + E               +E + +    A  K      +     +  C + + D++V+ ++       T   G CG +SS +  + +WPV + I
Sbjct:    1 METWSVLLADVDKRDKIYRTIQYLCKLYCGLPYGSAETKL------GVRKLAKVLSSARQVLRLGKSFLVWNKIRSQPKMVDPISFSLIRL-SDFSFMLYFLYDNIAWLFRSGLIVGKEKGPRRKATEFYLSGAAFNLLENTRQLLKIVFMERHYSSSE------------HSQNEMMGEQHFSAQMKHDRIWKQRLYLTICICIRLILDIIVALNILRDDSKDTIFNGICGSLSSIIAFYISWPVKKSI 231          
BLAST of Ggra4561.t1 vs. uniprot
Match: A0A8B6D9J9 (Peroxin-11B n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6D9J9_MYTGA)

HSP 1 Score: 68.6 bits (166), Expect = 5.040e-10
Identity = 60/240 (25.00%), Postives = 117/240 (48.75%), Query Frame = 0
Query:   21 SNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGLFSTVVTLMEIRRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQRCA------MVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSSAVGCWQTW 254
            + + GRDKLFRL+QY  KL+    Q              L  +E++M+ +R++ R  K    ++      + + +  ++++  +S LA   + + D++ F    G+IK D  K SR +++ W+ S++  L      ++ I     I+ E   + EN+Q+ G+ ++  +E S    + K MG +  L++C       ++   K +SDLV+  +   +  +   + G  G++SSA+G    W
Sbjct:   16 AQTNGRDKLFRLLQYGSKLISWYLQTDQGKLDFL---EKLKKLETSMSMTRKLLRFGKSLD-FILAALKTIHLSDPVLKLTITMSKLAQSVFLIFDHIIFAHNLGIIKADKEKWSRYSSQCWLFSLILNLLRNSYDILSI-----ISNEAKAQ-ENRQRRGQYVNGGIEHSV--TSRKPMGRVQILKKCCYENQPVVLDFVKNMSDLVLPLNSLGKIKVSGGIQGSLGLLSSAIGIATVW 243          
BLAST of Ggra4561.t1 vs. uniprot
Match: A0A7I8W0Y0 (DgyrCDS10672 n=2 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W0Y0_9ANNE)

HSP 1 Score: 66.6 bits (161), Expect = 1.790e-9
Identity = 47/147 (31.97%), Postives = 75/147 (51.02%), Query Frame = 0
Query:   21 SNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGLFSTVVTLMEI--RRRHR 165
            S + GRDKLFRL+QY  +      Q       ++        +E AM+++R+  RL K     +  +  L ++ +   +I+   S ++L  Y L D+VT+  K G+IK D +K S RA +FW+LS++  L   +  L  I    RHR
Sbjct:   12 SQTNGRDKLFRLIQYFSRFCSYHSQDSMAVKMSN--------LEQAMSSTRKALRLGKTLDFLLATKKSL-KLSDPLHKITITASKISLAVYMLADHVTWFAKLGLIKTDTTKWSHRAFKFWLLSIIFNLVRDLYELCNIYINERHR 149          
BLAST of Ggra4561.t1 vs. uniprot
Match: A0A7J7IIU0 (Peroxisomal bioproteinsis factor 11 alpha n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IIU0_9RHOD)

HSP 1 Score: 66.2 bits (160), Expect = 4.920e-9
Identity = 62/245 (25.31%), Postives = 111/245 (45.31%), Query Frame = 0
Query:   18 RALSNSEGRDKLFRLVQYVCKLLRG--VKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGLF-STVVTLMEIRRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQ----RCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSSAVGCWQTWP 255
            + L+ ++GRDK++RLVQ+  KL RG    Q                 +E  +A SR++ RL +  ++ VK   +    PN +     L++D +LF ++  D+V +L ++G+     S  + + A FW       LF ++ V+L+    +     +  L+   Q +  +G     +D+ +     E    M+      R A+    +   D+VV  +++  G     LVG  GV+SS +   Q WP
Sbjct:   10 KLLATTDGRDKVYRLVQFAAKLTRGPYTTQLAEEAEKVPLLVRKAFTLELILADSRKLFRLARGLNILVKYWGNRRSAPNKAA----LVTDASLFWFFAFDHVVWLYRSGLW---TSPLAGKRALFWTRCAGHCLFLASFVSLLLHGYKAWSVLKTKLRLRGQGKKAQGASHLSDDAPKAEHTAEEATQMQKMPFEGRAALSRVFRYGCDVVVGLNMARPGEYSQTLVGAAGVLSSVIQIVQIWP 247          
BLAST of Ggra4561.t1 vs. uniprot
Match: peroxisomal membrane protein 11B n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00199D0731 (peroxisomal membrane protein 11B n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00199D0731)

HSP 1 Score: 62.8 bits (151), Expect = 5.390e-8
Identity = 58/238 (24.37%), Postives = 109/238 (45.80%), Query Frame = 0
Query:   13 IDTWHRALSNSEGRDKLFRLVQYVCKLLRGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKR-DASKASRRAARFWMLSVMSGLFSTVVTLMEIRRRHRITRELLLK--TENQQQDGEGIDEALEDSTR-HAAGKEMGALMRLQRCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSS 246
            ++TW R  + S+ R+++FR  QY C LL      GG  A      S +  +E+ ++ SR++ RL   ++  ++     + + +  + +   +S L    Y++CDN+ +  KTG++ R D  K S+R+ R+++ +++  L   V  +  +  R R T +  L    EN +        A   S R     + + A++R     ++   K L D+ +              VG CG+ SS
Sbjct:    1 METWVRFSAQSQARERVFRAAQYACTLLGYTLHKGGAAAELI---STIKQLEAHLSISRKLMRLGN-SAEALEAAKRAIHLSDFVLRLCITVSHLNRVMYFICDNLLWAGKTGLLPRLDQDKWSQRSFRYYLFALILNLTRDVYEIHGLMERERRTSKAHLSGAVENDESSSSTPRCASVFSARIQQQLRLLSAVLRSNPPLLLDTLKNLCDVFIPLDKLGLYPTGAGFVGACGLTSS 234          
BLAST of Ggra4561.t1 vs. uniprot
Match: A0A2A4JJ35 (Uncharacterized protein n=2 Tax=Heliothinae TaxID=95178 RepID=A0A2A4JJ35_HELVI)

HSP 1 Score: 62.0 bits (149), Expect = 8.830e-8
Identity = 57/230 (24.78%), Postives = 105/230 (45.65%), Query Frame = 0
Query:   21 SNSEGRDKLFRLVQYVCKLL-RGVKQAGGNTATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEISNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGL---FSTVVTLMEIRRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEMGALMRLQRCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSS 246
            + S GRDK+ RL+QY  +L+   ++    N  +       +  +E   ++ R+I RL +   +     +  M I +  + ++  IS LA   +   D++ +L K+G +K D+ K +R A +FW+LS+++ L   F  +V LM++ +   +    LL T            A+ +   + + K M  LM   +   +   K   D+ +  +      L  + VG  G VSS
Sbjct:    9 NQSNGRDKIARLIQYTSRLVWHQLEIRNANKYSVD----RIKNLEQTFSSFRKILRLGRCIDICYTALNS-MHIEDPILRVTLTISKLAHALFLYSDHIVWLTKSGFLKTDSEKWNRTANKFWLLSIIANLARDFYEIVHLMDLHKSTFLKPSELLNT------------AIRNHNWNGSVKNMYILMACHKDVFIDTLKNSCDIFIPLTALGFTKLSPSTVGVLGAVSS 221          
The following BLAST results are available for this feature:
BLAST of Ggra4561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A2V3J4C23.220e-7249.19Peroxisomal membrane protein 11-1 n=1 Tax=Gracilar... [more]
M2XP251.640e-3031.73Peroxisomal biogenesis factor 11 n=1 Tax=Galdieria... [more]
A0A5J4YT203.580e-2532.51Peroxisomal membrane protein 11D n=1 Tax=Porphyrid... [more]
A0A7S0G9721.320e-2330.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2Y7D16.030e-1123.20Peroxisomal biogenesis factor 11 n=1 Tax=Galdieria... [more]
A0A8B6D9J95.040e-1025.00Peroxin-11B n=2 Tax=Mytilus galloprovincialis TaxI... [more]
A0A7I8W0Y01.790e-931.97DgyrCDS10672 n=2 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A7J7IIU04.920e-925.31Peroxisomal bioproteinsis factor 11 alpha n=1 Tax=... [more]
peroxisomal membrane protein 11B n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00199D07315.390e-824.37peroxisomal membrane protein 11B n=1 Tax=Silurus m... [more]
A0A2A4JJ358.830e-824.78Uncharacterized protein n=2 Tax=Heliothinae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008733Peroxisomal biogenesis factor 11PFAMPF05648PEX11coord: 14..254
e-value: 2.6E-36
score: 125.2
NoneNo IPR availablePANTHERPTHR12652PEROXISOMAL BIOGENESIS FACTOR 11coord: 11..255
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..160
NoneNo IPR availableTMHMMTMhelixcoord: 138..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:994129..994926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4561.t1Ggra4561.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 994129..994926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4561.t1 ID=Ggra4561.t1|Name=Ggra4561.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bp
MSLERVPCSPLVIDTWHRALSNSEGRDKLFRLVQYVCKLLRGVKQAGGNT
ATTSGSGSALMAVESAMATSRQISRLLKWTSVYVKRRHDLMRIPNSSVEI
SNLISDLALFAYYLCDNVTFLCKTGVIKRDASKASRRAARFWMLSVMSGL
FSTVVTLMEIRRRHRITRELLLKTENQQQDGEGIDEALEDSTRHAAGKEM
GALMRLQRCAMVACTKQLSDLVVSCSLSTQGGLHTALVGGCGVVSSAVGC
WQTWPVDEVIEPNSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008733PEX11