Ggra5731.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5731.t1
Unique NameGgra5731.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length313
Homology
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BLAST of Ggra5731.t1 vs. uniprot
Match: A0A2V3IEU6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU6_9FLOR)

HSP 1 Score: 101 bits (251), Expect = 7.840e-23
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = 0 
Query:  197 LSAATSIRVANRTAEAVRDAFKAAKEREICKARLASDASNADKYERRLKMNRWSAAASRVRRDAYTKALEAELVRMERAFKELMSQL 283
            +SAA SIR AN  AE VRD FKA KE EI +AR  +  SNA+KYERRL++NR SAAASR+RRDAYTKALEAEL++MER+F+  + Q+
Sbjct:    1 MSAAASIRHANVQAERVRDQFKADKESEILQARSEAGDSNAEKYERRLRLNRHSAAASRIRRDAYTKALEAELIKMERSFRAFVQQM 87
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BLAST of Ggra5731.t1 vs. uniprot
Match: R7QEH7 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEH7_CHOCR)

HSP 1 Score: 87.8 bits (216), Expect = 3.030e-16
Identity = 64/118 (54.24%), Postives = 80/118 (67.80%), Query Frame = 0 
Query:  157 DASSKRTSRPATLRARPVVYKSRHLSSVAPSLVASTSSSLLSAATSIRVANRTAEAVRDAFKAAK-EREICKARLASDASNADKYERRLKMNRWSAAASRVRRDAYTKALEAELVRME 273
            D  SKR S P   + R V+YKS  L   APSLVA+ S++ +SA  +I+ A   AE VRD FK +K   EI       +A+NA KYERRL MNR SAAASRVRR+AYTKALEA++V++E
Sbjct:   25 DLQSKR-SPPRRQKPRHVIYKSTALQRAAPSLVAAASANAISATKAIQRAADEAEKVRDDFKLSKCGPEIDLVDGDDEATNAKKYERRLLMNRHSAAASRVRREAYTKALEAQIVQLE 141
The following BLAST results are available for this feature:
BLAST of Ggra5731.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEU67.840e-2365.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEH73.030e-1654.24BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 262..282
NoneNo IPR availableGENE3D1.20.5.170coord: 238..286
e-value: 1.0E-6
score: 30.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..167
NoneNo IPR availableCDDcd14686bZIPcoord: 240..284
e-value: 2.71034E-5
score: 39.0657
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 239..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000897_piloncontigtig00000897_pilon:199871..200809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5731.t1Ggra5731.t1Gracilaria gracilis GNS1m malemRNAtig00000897_pilon 199871..200809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5731.t1 ID=Ggra5731.t1|Name=Ggra5731.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=313bp
MDVDDDECDRVLLELFGDAQPLPLLPLVDFDCVSSPRAVPPAAAEASSVV
GARAVLSDDSGLPQLPDELPLTPAARHGAYRGAPTAPGRDGYVLTDDAVL
AAPAVMTPPLPAPASAALIAGVDGARAEEHSCAATTETLCEPRRGGADGS
SGVAKHDASSKRTSRPATLRARPVVYKSRHLSSVAPSLVASTSSSLLSAA
TSIRVANRTAEAVRDAFKAAKEREICKARLASDASNADKYERRLKMNRWS
AAASRVRRDAYTKALEAELVRMERAFKELMSQLRGDEGRQGGALKEWVNY
VSEQRREDDGSS*
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