Ggra10715.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10715.t1
Unique NameGgra10715.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length184
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:673999..674550 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10715Ggra10715Gracilaria gracilis GNS1m malegenetig00000888_pilon 673999..674550 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10715.t1.stop1Ggra10715.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000888_pilon 673999..674001 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10715.t1.CDS1Ggra10715.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000888_pilon 673999..674550 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10715.t1.exon1Ggra10715.t1.exon1Gracilaria gracilis GNS1m maleexontig00000888_pilon 673999..674550 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10715.t1.start1Ggra10715.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000888_pilon 674548..674550 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10715.t1Ggra10715.t1Gracilaria gracilis GNS1m malepolypeptidetig00000888_pilon 673999..674550 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10715.t1 ID=Ggra10715.t1|Name=Ggra10715.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=184bp
MSKNCRKNGPRFECEASQLYVNLYFSEKDVYSRFAPNDAFNLKSPGNFER
TLEGDKKMFEELNMLRVVVGKSPLKWSALLNGNAIEMSYKQVKEKRFCVN
DNDSEVLCSSFIVKTSEPKEMLNVAMLMAVDEAQALGLEVGNSYFREKIY
GDSLGVQWNLNGGTAMLLFEDAIMVTTVIGKRL*
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spliced messenger RNA

>Ggra10715.t1 ID=Ggra10715.t1|Name=Ggra10715.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=552bp|location=Sequence derived from alignment at tig00000888_pilon:673999..674550- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCAAGAATTGTAGAAAGAACGGGCCCAGATTCGAATGCGAAGCTTC
CCAGCTCTATGTCAACTTGTACTTTTCGGAGAAGGATGTATACTCTAGGT
TCGCACCCAACGACGCTTTCAATCTCAAAAGCCCTGGAAACTTCGAAAGA
ACGCTTGAAGGGGATAAGAAAATGTTTGAGGAACTGAATATGTTACGGGT
TGTTGTTGGCAAGTCGCCGTTGAAGTGGTCTGCTCTTCTAAATGGAAACG
CCATCGAGATGTCGTACAAGCAGGTGAAGGAAAAAAGGTTTTGCGTGAAT
GATAACGATTCGGAAGTTCTATGCTCCTCATTTATTGTGAAAACATCAGA
ACCAAAAGAGATGTTAAATGTGGCCATGCTGATGGCCGTGGACGAGGCAC
AGGCACTTGGGTTGGAGGTAGGCAACTCGTACTTTCGGGAGAAGATTTAT
GGGGACAGTCTTGGAGTGCAATGGAACTTGAACGGAGGGACAGCGATGCT
ATTGTTTGAAGATGCAATCATGGTCACCACCGTTATTGGTAAGAGGCTGT
GA
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protein sequence of Ggra10715.t1

>Ggra10715.t1 ID=Ggra10715.t1|Name=Ggra10715.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=184bp
MSKNCRKNGPRFECEASQLYVNLYFSEKDVYSRFAPNDAFNLKSPGNFER
TLEGDKKMFEELNMLRVVVGKSPLKWSALLNGNAIEMSYKQVKEKRFCVN
DNDSEVLCSSFIVKTSEPKEMLNVAMLMAVDEAQALGLEVGNSYFREKIY
GDSLGVQWNLNGGTAMLLFEDAIMVTTVIGKRL*
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mRNA from alignment at tig00000888_pilon:673999..674550-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10715.t1 ID=Ggra10715.t1|Name=Ggra10715.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=552bp|location=Sequence derived from alignment at tig00000888_pilon:673999..674550- (Gracilaria gracilis GNS1m male)
ATGTCCAAGAATTGTAGAAAGAACGGGCCCAGATTCGAATGCGAAGCTTC
CCAGCTCTATGTCAACTTGTACTTTTCGGAGAAGGATGTATACTCTAGGT
TCGCACCCAACGACGCTTTCAATCTCAAAAGCCCTGGAAACTTCGAAAGA
ACGCTTGAAGGGGATAAGAAAATGTTTGAGGAACTGAATATGTTACGGGT
TGTTGTTGGCAAGTCGCCGTTGAAGTGGTCTGCTCTTCTAAATGGAAACG
CCATCGAGATGTCGTACAAGCAGGTGAAGGAAAAAAGGTTTTGCGTGAAT
GATAACGATTCGGAAGTTCTATGCTCCTCATTTATTGTGAAAACATCAGA
ACCAAAAGAGATGTTAAATGTGGCCATGCTGATGGCCGTGGACGAGGCAC
AGGCACTTGGGTTGGAGGTAGGCAACTCGTACTTTCGGGAGAAGATTTAT
GGGGACAGTCTTGGAGTGCAATGGAACTTGAACGGAGGGACAGCGATGCT
ATTGTTTGAAGATGCAATCATGGTCACCACCGTTATTGGTAAGAGGCTGT
GA
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Coding sequence (CDS) from alignment at tig00000888_pilon:673999..674550-

>Ggra10715.t1 ID=Ggra10715.t1|Name=Ggra10715.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=552bp|location=Sequence derived from alignment at tig00000888_pilon:673999..674550- (Gracilaria gracilis GNS1m male)
ATGTCCAAGAATTGTAGAAAGAACGGGCCCAGATTCGAATGCGAAGCTTC
CCAGCTCTATGTCAACTTGTACTTTTCGGAGAAGGATGTATACTCTAGGT
TCGCACCCAACGACGCTTTCAATCTCAAAAGCCCTGGAAACTTCGAAAGA
ACGCTTGAAGGGGATAAGAAAATGTTTGAGGAACTGAATATGTTACGGGT
TGTTGTTGGCAAGTCGCCGTTGAAGTGGTCTGCTCTTCTAAATGGAAACG
CCATCGAGATGTCGTACAAGCAGGTGAAGGAAAAAAGGTTTTGCGTGAAT
GATAACGATTCGGAAGTTCTATGCTCCTCATTTATTGTGAAAACATCAGA
ACCAAAAGAGATGTTAAATGTGGCCATGCTGATGGCCGTGGACGAGGCAC
AGGCACTTGGGTTGGAGGTAGGCAACTCGTACTTTCGGGAGAAGATTTAT
GGGGACAGTCTTGGAGTGCAATGGAACTTGAACGGAGGGACAGCGATGCT
ATTGTTTGAAGATGCAATCATGGTCACCACCGTTATTGGTAAGAGGCTGT
GA
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