Ggra10718.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10718.t1
Unique NameGgra10718.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length707
Homology
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BLAST of Ggra10718.t1 vs. uniprot
Match: A0A2V3IUZ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUZ7_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 3.150e-58
Identity = 112/248 (45.16%), Postives = 159/248 (64.11%), Query Frame = 0 
Query:  292 PVLQSAFVQALQNPLVAEENCRKLISKDSCKQSLEEWYAAHRLLMIAVDNDKLDPSADVDGKPFYWRDQLYCMAQRLHIANAEDRKQVFRCLKEAANRGLIDTPDAYIQGINTMELVREETSRLKTAVLVLLNRVVKAEATAEELFLDLRSAFENYKRRQFYCNLAGIGIALIPLVGGALGKALLSGTELVGNMSSGDFMECTLSITTAVLSDENLMKLSRNRRDEVENIFAENRFTRKGVQELFATR 539
            P LQ A    L       E+C  LI+K +C+ SLEEW AAH+LL++AV +  LDPSADV+G+ ++WRDQLYC      + + ED+ ++FRCL+EA +  LID+PDAYIQGI+ M+ VREE   LK A L LL RV+  E + E     LR+A + Y++RQ Y NL GI + LIP+ GGA+ KA+++G E+VG++++ D  E  L     +LSDEN   L R+R++E+  +F E  +T   +  L   R
Sbjct:  364 PPLQKALESVLSGISSPLEHCAGLINKKNCQHSLEEWNAAHQLLVLAVKDGALDPSADVEGQVYFWRDQLYCTVIDHQVLSVEDKNRLFRCLREAHDLRLIDSPDAYIQGIHVMQSVREEVFVLKRACLFLLMRVLSLETSIE----SLRTALKRYRKRQLYSNLVGIALQLIPVAGGAMAKAIMTGAEIVGDLNACDVAEYALESAVTILSDENFTTLPRSRQEELTGLFEEFGYTMNDIHLLLCNR 607
The following BLAST results are available for this feature:
BLAST of Ggra10718.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUZ73.150e-5845.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 567..587
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 565..582
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..582
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 452..476
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..451
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 477..706
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 59..132
e-value: 1.7E-6
score: 29.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:721414..723534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10718.t1Ggra10718.t1Gracilaria gracilis GNS1m malemRNAtig00000888_pilon 721414..723534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10718.t1 ID=Ggra10718.t1|Name=Ggra10718.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=707bp
MVRKAHSTDMNVAEDNWTLFHEKLLSEGDILGKSAALGYGRFSRIVDGSL
NVLCQQSNGDDFRSIFRAFCVLQNQQDAQLPMLQKLWGFDNLKQAEDVVD
TFAKVSLVRKLHRSSAISVRVDDLVLGIARQRASERNEEQSFFRNLVDNY
DPQLKFSAVLQLCQVLQETPKDKMFFRDAAQNRIEKLRELETFYGKAVLS
AEEIIRKLESSSNKESMNDLNKIATDLYSNFEQLGVYVAQVNSSVIKRFK
QMNELVQKCGDDLNQFLGFVTMNFAQTLPLLYSTALTSDSLPVLQSAFVQ
ALQNPLVAEENCRKLISKDSCKQSLEEWYAAHRLLMIAVDNDKLDPSADV
DGKPFYWRDQLYCMAQRLHIANAEDRKQVFRCLKEAANRGLIDTPDAYIQ
GINTMELVREETSRLKTAVLVLLNRVVKAEATAEELFLDLRSAFENYKRR
QFYCNLAGIGIALIPLVGGALGKALLSGTELVGNMSSGDFMECTLSITTA
VLSDENLMKLSRNRRDEVENIFAENRFTRKGVQELFATRGNMGEVQLRIE
YPGNGEGENGTTQTPEAHQERDLREREESEREQIIEEIVVSSEQSAVDQE
PRDNTSAENLNLSAVQTTKDLAEAWATFVLGVKGTEEDNNNDIVVSCLLE
LLENESIPPETLRTALPAEVEEVRIAAISTIEQRMGSAMKIGEKIRMRKF
LDSFTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf