Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10728.t1.stop1 | Ggra10728.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000888_pilon 1018690..1018692 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10728.t1.intron1 | Ggra10728.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000888_pilon 1019581..1019705 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10728.t1.start1 | Ggra10728.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000888_pilon 1019991..1019993 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10728.t1 ID=Ggra10728.t1|Name=Ggra10728.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=393bp
MAANRVRDSHGRCRLSHQSVRDLRTWKKLSGRDLEGRSIHSLPPTASIHS
DAADVGYGGILHLQDMGAGRPGLWAAQGIWDWRDRVCTITNRELKAASDE
GVSPFETGSRRKKSIYLFGLASFGSKQVCRRSFAAIPPRRPPDQVAAAAF
RAGWYGRSSRRIPIQTARRASRVSTQAVMGGVRGNSGPQRSSSSVSTRGL
NHADTDRVAPDRITGPTADTKMETAAVVLDRTSDGLKSRRIVNAIRPRLG
RPEEPQSSLARATTRYESVTMEMLAAGRLRESAASSAAMHRSTRLLVEHG
WARRTSRSRDTQWRTFTAFCRSDNLNPLLVTEAHLAAFIGWVTEEREAGR
RNIGSSSLPQYLSVIRQRHLAALGSEVPPFPFISHLLRAHPR* back to topspliced messenger RNA >Ggra10728.t1 ID=Ggra10728.t1|Name=Ggra10728.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1179bp|location=Sequence derived from alignment at tig00000888_pilon:1018690..1019993- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTGCAAACAGAGTACGCGATTCGCATGGACGCTGCCGACTCAGCCA
TCAGAGTGTACGCGATCTCAGAACCTGGAAGAAACTATCTGGCAGGGACC
TGGAAGGCCGTTCAATACATTCACTTCCTCCTACCGCTTCAATTCATTCA
GATGCGGCGGACGTGGGTTATGGTGGAATATTACACCTCCAGGACATGGG
CGCTGGTCGCCCTGGGCTGTGGGCCGCCCAGGGCATCTGGGACTGGCGAG
ACCGTGTTTGCACTATTACCAACCGCGAACTGAAGGCCGCCAGTGATGAG
GGAGTTTCGCCGTTTGAAACGGGTTCTCGACGCAAGAAATCTATATATTT
GTTCGGACTGGCTTCCTTCGGTAGCAAACAAGTTTGCAGACGCTCTTTCG
CGGCGATTCCCCCGCGGAGACCTCCGGATCAGGTGGCAGCTGCGGCGTTC
CGTGCGGGCTGGTATGGGCGCAGCTCGAGACGCATTCCAATACAGACCGC
TCGGAGAGCATCCCGTGTTTCTACGCAGGCAGTCATGGGCGGAGTTAGAG
GCAATTCGGGACCCCAACGAAGTTCGTCTTCTGTGTCCACCCGTGGATTA
AATCACGCCGACACTGATAGAGTTGCGCCGGACAGGATCACCGGCCCTAC
TGCTGATACCAAAATGGAAACGGCAGCCGTGGTACTGGACCGCACTTCGG
ATGGCCTCAAAAGTCGAAGAATTGTCAACGCCATCAGACCACGTTTGGGA
CGCCCAGAGGAGCCTCAATCCTCGCTGGCGCGTGCTACTACTAGATATGA
ATCTGTAACAATGGAGATGCTGGCTGCTGGTCGCCTTAGAGAAAGCGCAG
CTTCCAGCGCTGCTATGCACCGCTCTACCCGATTGCTAGTGGAGCATGGT
TGGGCTCGGCGTACAAGCAGATCCCGCGATACCCAATGGCGCACTTTCAC
CGCTTTTTGTCGATCGGACAATCTCAACCCTCTTCTTGTTACTGAAGCTC
ACTTGGCCGCTTTTATTGGATGGGTGACTGAAGAACGAGAAGCTGGTCGT
CGTAACATTGGTAGCTCCTCTCTGCCGCAGTATCTTTCTGTAATACGACA
ACGTCATCTTGCAGCTTTAGGCAGCGAGGTACCGCCGTTCCCTTTCATTT
CGCATTTGCTTCGAGCCCATCCTCGATAG back to topprotein sequence of Ggra10728.t1 >Ggra10728.t1 ID=Ggra10728.t1|Name=Ggra10728.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=393bp
MAANRVRDSHGRCRLSHQSVRDLRTWKKLSGRDLEGRSIHSLPPTASIHS
DAADVGYGGILHLQDMGAGRPGLWAAQGIWDWRDRVCTITNRELKAASDE
GVSPFETGSRRKKSIYLFGLASFGSKQVCRRSFAAIPPRRPPDQVAAAAF
RAGWYGRSSRRIPIQTARRASRVSTQAVMGGVRGNSGPQRSSSSVSTRGL
NHADTDRVAPDRITGPTADTKMETAAVVLDRTSDGLKSRRIVNAIRPRLG
RPEEPQSSLARATTRYESVTMEMLAAGRLRESAASSAAMHRSTRLLVEHG
WARRTSRSRDTQWRTFTAFCRSDNLNPLLVTEAHLAAFIGWVTEEREAGR
RNIGSSSLPQYLSVIRQRHLAALGSEVPPFPFISHLLRAHPR* back to topmRNA from alignment at tig00000888_pilon:1018690..1019993- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10728.t1 ID=Ggra10728.t1|Name=Ggra10728.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1304bp|location=Sequence derived from alignment at tig00000888_pilon:1018690..1019993- (Gracilaria gracilis GNS1m male)
ATGGCTGCAAACAGAGTACGCGATTCGCATGGACGCTGCCGACTCAGCCA
TCAGAGTGTACGCGATCTCAGAACCTGGAAGAAACTATCTGGCAGGGACC
TGGAAGGCCGTTCAATACATTCACTTCCTCCTACCGCTTCAATTCATTCA
GATGCGGCGGACGTGGGTTATGGTGGAATATTACACCTCCAGGACATGGG
CGCTGGTCGCCCTGGGCTGTGGGCCGCCCAGGGCATCTGGGACTGGCGAG
ACCGTGTTTGCACTATTACCAACCGCGAACTGAAGGCCGTTCGTCTGTTA
TTAATGGGCAAACTTGGGAGGAAGCTACAAACACTCAAACGAAATGACAT
TTTATGCCATCTCGACAACCAAGGTGTGGTTTATATCACAAACGCGTTTG
TGTCCGCCAGCAGGCCAGTGATGAGGGAGTTTCGCCGTTTGAAACGGGTT
CTCGACGCAAGAAATCTATATATTTGTTCGGACTGGCTTCCTTCGGTAGC
AAACAAGTTTGCAGACGCTCTTTCGCGGCGATTCCCCCGCGGAGACCTCC
GGATCAGGTGGCAGCTGCGGCGTTCCGTGCGGGCTGGTATGGGCGCAGCT
CGAGACGCATTCCAATACAGACCGCTCGGAGAGCATCCCGTGTTTCTACG
CAGGCAGTCATGGGCGGAGTTAGAGGCAATTCGGGACCCCAACGAAGTTC
GTCTTCTGTGTCCACCCGTGGATTAAATCACGCCGACACTGATAGAGTTG
CGCCGGACAGGATCACCGGCCCTACTGCTGATACCAAAATGGAAACGGCA
GCCGTGGTACTGGACCGCACTTCGGATGGCCTCAAAAGTCGAAGAATTGT
CAACGCCATCAGACCACGTTTGGGACGCCCAGAGGAGCCTCAATCCTCGC
TGGCGCGTGCTACTACTAGATATGAATCTGTAACAATGGAGATGCTGGCT
GCTGGTCGCCTTAGAGAAAGCGCAGCTTCCAGCGCTGCTATGCACCGCTC
TACCCGATTGCTAGTGGAGCATGGTTGGGCTCGGCGTACAAGCAGATCCC
GCGATACCCAATGGCGCACTTTCACCGCTTTTTGTCGATCGGACAATCTC
AACCCTCTTCTTGTTACTGAAGCTCACTTGGCCGCTTTTATTGGATGGGT
GACTGAAGAACGAGAAGCTGGTCGTCGTAACATTGGTAGCTCCTCTCTGC
CGCAGTATCTTTCTGTAATACGACAACGTCATCTTGCAGCTTTAGGCAGC
GAGGTACCGCCGTTCCCTTTCATTTCGCATTTGCTTCGAGCCCATCCTCG
ATAG back to topCoding sequence (CDS) from alignment at tig00000888_pilon:1018690..1019993- >Ggra10728.t1 ID=Ggra10728.t1|Name=Ggra10728.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1179bp|location=Sequence derived from alignment at tig00000888_pilon:1018690..1019993- (Gracilaria gracilis GNS1m male)
ATGGCTGCAAACAGAGTACGCGATTCGCATGGACGCTGCCGACTCAGCCA
TCAGAGTGTACGCGATCTCAGAACCTGGAAGAAACTATCTGGCAGGGACC
TGGAAGGCCGTTCAATACATTCACTTCCTCCTACCGCTTCAATTCATTCA
GATGCGGCGGACGTGGGTTATGGTGGAATATTACACCTCCAGGACATGGG
CGCTGGTCGCCCTGGGCTGTGGGCCGCCCAGGGCATCTGGGACTGGCGAG
ACCGTGTTTGCACTATTACCAACCGCGAACTGAAGGCCGCCAGTGATGAG
GGAGTTTCGCCGTTTGAAACGGGTTCTCGACGCAAGAAATCTATATATTT
GTTCGGACTGGCTTCCTTCGGTAGCAAACAAGTTTGCAGACGCTCTTTCG
CGGCGATTCCCCCGCGGAGACCTCCGGATCAGGTGGCAGCTGCGGCGTTC
CGTGCGGGCTGGTATGGGCGCAGCTCGAGACGCATTCCAATACAGACCGC
TCGGAGAGCATCCCGTGTTTCTACGCAGGCAGTCATGGGCGGAGTTAGAG
GCAATTCGGGACCCCAACGAAGTTCGTCTTCTGTGTCCACCCGTGGATTA
AATCACGCCGACACTGATAGAGTTGCGCCGGACAGGATCACCGGCCCTAC
TGCTGATACCAAAATGGAAACGGCAGCCGTGGTACTGGACCGCACTTCGG
ATGGCCTCAAAAGTCGAAGAATTGTCAACGCCATCAGACCACGTTTGGGA
CGCCCAGAGGAGCCTCAATCCTCGCTGGCGCGTGCTACTACTAGATATGA
ATCTGTAACAATGGAGATGCTGGCTGCTGGTCGCCTTAGAGAAAGCGCAG
CTTCCAGCGCTGCTATGCACCGCTCTACCCGATTGCTAGTGGAGCATGGT
TGGGCTCGGCGTACAAGCAGATCCCGCGATACCCAATGGCGCACTTTCAC
CGCTTTTTGTCGATCGGACAATCTCAACCCTCTTCTTGTTACTGAAGCTC
ACTTGGCCGCTTTTATTGGATGGGTGACTGAAGAACGAGAAGCTGGTCGT
CGTAACATTGGTAGCTCCTCTCTGCCGCAGTATCTTTCTGTAATACGACA
ACGTCATCTTGCAGCTTTAGGCAGCGAGGTACCGCCGTTCCCTTTCATTT
CGCATTTGCTTCGAGCCCATCCTCGATAG back to top
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