Ggra10724.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10724.t1
Unique NameGgra10724.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length348
Homology
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A2V3IF73 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF73_9FLOR)

HSP 1 Score: 656 bits (1692), Expect = 1.970e-237
Identity = 296/347 (85.30%), Postives = 315/347 (90.78%), Query Frame = 0
Query:    1 MIRISRIITFSLLTFSLASTAQLANGLEWQTSSDAVWAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGILRSLLLANGRDSFGMTPHDPLADARPYLPIFRFDDDADGWCFPDDKEASPSRDGICNGRFDRRAPVFVHSKKCGRYTVYQFNLWYGWQKGCVNQLFGGGRHGNDNEYVQIWTLGASGPVARVRYNQHNGYYFREPGRGAEMHGSRAVVYIGKIAHGAYHRGCTGGKFWQTLIPNSGTDFCVGGCGYWDDFRNSEDSNFVLDTGSLRKDRSPREIDCDVPNCTPGHNSWRSLASAACFGLDN 347
            MIR+    +  LL  SLA+   +A+G  WQTSSDAVWAMNCDFRGND+GSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFK GRSVSQSSAI N DPGAVCGILRSLL+ANGRDSFGMTPHDP A+ARPYLPIFRFDDDA GWCFPDDKEA   RD +CNGRFDRRAPV+VHSK+CG+YTVYQ+NLWYGWQKGCVNQLFGGGRHG+DNEYVQ+WTLG SGPVARVRYNQHNGYYFREPGRGAEMHGSR VVYIGKIAHGAYHRGCTGGKFWQTLIPN GTDFCVGGC YWDDFRNSED NFV+D G+LRKD SPREIDCD PNCTPGHNSWRS  SAACFGL++
Sbjct:    1 MIRLRHSTSSILLLLSLAAAVLVADGFNWQTSSDAVWAMNCDFRGNDVGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKNGRSVSQSSAIPNPDPGAVCGILRSLLIANGRDSFGMTPHDPFANARPYLPIFRFDDDAGGWCFPDDKEAQ--RDKVCNGRFDRRAPVYVHSKQCGQYTVYQYNLWYGWQKGCVNQLFGGGRHGDDNEYVQVWTLGPSGPVARVRYNQHNGYYFREPGRGAEMHGSRPVVYIGKIAHGAYHRGCTGGKFWQTLIPNRGTDFCVGGCAYWDDFRNSEDGNFVMDEGTLRKDPSPREIDCDAPNCTPGHNSWRSPKSAACFGLNH 345          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A1X6NYI6 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYI6_PORUM)

HSP 1 Score: 303 bits (775), Expect = 2.580e-98
Identity = 162/338 (47.93%), Postives = 206/338 (60.95%), Query Frame = 0
Query:   11 SLLTFSLASTAQLANGLEWQTSSDAVWAMNCDF-RGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGILRSLLLANGRDSFGMTPHDPLADARPYLPIFRFDDDADGWCFPDDKEASPSRDGICNGRFDRRAPVFVHSKKCGRYTVYQFNLWYGWQKGCVNQLFGGGRHGNDNEYVQIWTLGASGPVARVRYNQHNGYYFREPGRGAE-MHGSRAVVYIGKIAHGAYHRGCTGGKFWQTLIPNSGTDFCVGGCGYWDDFRNSEDSNFVLDTGSLRKDRSPREIDCDVPNCTPGHNSWRSLASAACFGLD 346
            +LL  +L   A  A+ L W+TSSDAV+A+ CDF    DIG   +RGEDCS AC     C+HF W+    GTC+FK G  +S+ +A S S PGAVCG+++             TP  P A+AR ++PIFR+DD A   CFPDDK    SR+G C   F R APVFV +  CG YTV+++NLWYG Q+ C     G GR  NDNEYV++W  G  G +A V Y QHNG Y+R    G   M G+R VVYIGK +HGAYH GCTG  F +         FC GGC YWDDFRNS    +VLD   L  D +PR IDC+ P CT GH+   ++ ++AC+G++
Sbjct:   14 ALLPVALLLLATAASALSWRTSSDAVYALGCDFPSAADIGRRSVRGEDCSGACGRVSGCTHFVWS---SGTCYFKGG-PISRDAAFSTSAPGAVCGVMKGA---------AATPTVP-AEARRFVPIFRYDDGAGDSCFPDDKRQISSRNGKC-AAFRRNAPVFVSTATCGDYTVFKYNLWYGKQQSC---FLGFGRGTNDNEYVEVWLKG--GAIAWVGYYQHNGLYYRRVKSGGPGMAGNRPVVYIGKNSHGAYHWGCTGNPFSRN--------FCKGGCAYWDDFRNSRKGRYVLDLPVLHVDPTPRSIDCNAPICTKGHSKLPNVVNSACYGVE 323          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A813XSC8 (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A813XSC8_9BILA)

HSP 1 Score: 93.6 bits (231), Expect = 5.650e-20
Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   21 AQLANG-LEWQTSSDAVWAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGIL 107
            A LA+G + W  ++   WAM+CDF GND+ + Q+ GE C   C   ++C+HFAWT++NGGTCW K G  VS++ A   +DP  VCG++
Sbjct:   21 ATLASGVINWNGNN---WAMSCDFYGNDLSNVQIPGEACGGKCAETQECTHFAWTQWNGGTCWMKKG-PVSKADAFPTNDPNMVCGVI 104          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A821ZV10 (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821ZV10_9BILA)

HSP 1 Score: 92.4 bits (228), Expect = 9.210e-20
Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0
Query:   37 WAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGILRS 109
            WAM CDF  ND+ S Q+RGEDCS  C     C+HF WT++NGGTCW K G SVS++ AI+ ++   VCG++ S
Sbjct:   20 WAMGCDFADNDMKSVQVRGEDCSGRCAETAGCTHFVWTKWNGGTCWMKKG-SVSKNDAIATNNQDMVCGVVSS 91          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A815TM40 (Hypothetical protein n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A815TM40_9BILA)

HSP 1 Score: 98.6 bits (244), Expect = 1.560e-19
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    5 SRIITFSLLTFSLASTAQLANGLEWQTSSDAVWAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGILRS 109
            S  +TF+ +   L  T    + + W   S   WAM+CDF GND+  A++RGEDC   C   + C+HF WT +NGGTCW K G  VSQ+ A S +D   VCGI+ S
Sbjct:    3 SSTVTFACILIFLL-TIHYGSAINWNGKS---WAMSCDFNGNDLTKAEIRGEDCGGRCASTQGCTHFTWTTWNGGTCWMKQG-PVSQNDAFSTNDQSMVCGIISS 102          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A820Z6K8 (Cellulase n=4 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820Z6K8_9BILA)

HSP 1 Score: 97.1 bits (240), Expect = 2.840e-19
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    9 TFSLLTFSLASTAQLAN---GLEWQTSSDAVWAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGIL 107
            T++L+TF + +   L +    + W  ++   WAM+CDF G D+ S Q+ GE C   C     C+HFAWT+YNGGTCW KTG   S+S A + SDP  VCG++
Sbjct:    7 TWTLITFLMVNILNLDHVKCNVNWNGNN---WAMSCDFWGKDLYSVQISGEHCGGKCAQTPGCTHFAWTKYNGGTCWMKTG-GASKSDAFATSDPNMVCGVI 104          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A818ZIH6 (Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818ZIH6_9BILA)

HSP 1 Score: 95.9 bits (237), Expect = 4.930e-19
Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0
Query:   37 WAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGIL---RSLLLANG 115
            WAM CDF  ND+ S Q+RGEDCS  C     C+HF WT++NGGTCW K G SVS++ AI+ +D   VCG++   R + +ANG
Sbjct:   20 WAMGCDFADNDMKSVQVRGEDCSGRCAETAGCTHFVWTKWNGGTCWMKKG-SVSKNDAIATNDQDMVCGVVSSSRPISVANG 100          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A7R9AEU0 (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9AEU0_9CRUS)

HSP 1 Score: 95.5 bits (236), Expect = 1.360e-18
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   37 WAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGIL 107
            WA+ CDFRGND+ +AQ+RGEDC   C   + C+HF WT +NGGTCW K G++ SQS A +  D   VCG++
Sbjct:  249 WALGCDFRGNDLSNAQIRGEDCGGRCAATQGCTHFTWTTWNGGTCWMKQGQA-SQSDAFATGDYSMVCGVI 318          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A815D585 (Hypothetical protein n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A815D585_9BILA)

HSP 1 Score: 95.1 bits (235), Expect = 1.990e-18
Identity = 39/96 (40.62%), Postives = 59/96 (61.46%), Query Frame = 0
Query:   12 LLTFSLASTAQLANGLEWQTSSDAVWAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGIL 107
            L+ F + ++   A  ++W   +   WA+ CDF GND+ + Q+RGEDC   C   + C+HF WTR+NGGTCW K G  +S++ A+   D   VCG++
Sbjct:   38 LMLFVIINSMSSARAIQWAKDN---WALGCDFVGNDLSNVQIRGEDCGLTCAQTQGCTHFTWTRWNGGTCWLKKG-PISKNQAVKTDDNTMVCGVV 129          
BLAST of Ggra10724.t1 vs. uniprot
Match: A0A820BHQ7 (Hypothetical protein n=8 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820BHQ7_9BILA)

HSP 1 Score: 95.9 bits (237), Expect = 2.780e-18
Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 0
Query:   27 LEWQTSSDAVWAMNCDFRGNDIGSAQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDPGAVCGIL 107
            ++W  ++   WAM+CDFRGND+ S Q   + C   C   + C+HFAWTRYNGGTCW K+G +VS+S AIS+SD   +CG++
Sbjct:  376 IQWNGNN---WAMSCDFRGNDLHSVQTSADLCGGKCAQVQGCTHFAWTRYNGGTCWLKSG-AVSKSDAISSSDSTMICGVV 452          
The following BLAST results are available for this feature:
BLAST of Ggra10724.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IF731.970e-23785.30Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A1X6NYI62.580e-9847.93Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A813XSC85.650e-2046.59Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A821ZV109.210e-2053.42Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A815TM401.560e-1944.76Hypothetical protein n=4 Tax=Adineta steineri TaxI... [more]
A0A820Z6K82.840e-1944.12Cellulase n=4 Tax=Rotaria sp. Silwood2 TaxID=27625... [more]
A0A818ZIH64.930e-1952.44Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 ... [more]
A0A7R9AEU01.360e-1853.52Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
A0A815D5851.990e-1840.63Hypothetical protein n=4 Tax=Rotaria sordida TaxID... [more]
A0A820BHQ72.780e-1850.62Hypothetical protein n=8 Tax=Rotaria sp. Silwood2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.4.10Hepatocyte Growth Factorcoord: 35..110
e-value: 3.4E-8
score: 35.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..347
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:869504..870547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10724.t1Ggra10724.t1Gracilaria gracilis GNS1m malemRNAtig00000888_pilon 869504..870547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10724.t1 ID=Ggra10724.t1|Name=Ggra10724.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=348bp
MIRISRIITFSLLTFSLASTAQLANGLEWQTSSDAVWAMNCDFRGNDIGS
AQMRGEDCSRACDLKRDCSHFAWTRYNGGTCWFKTGRSVSQSSAISNSDP
GAVCGILRSLLLANGRDSFGMTPHDPLADARPYLPIFRFDDDADGWCFPD
DKEASPSRDGICNGRFDRRAPVFVHSKKCGRYTVYQFNLWYGWQKGCVNQ
LFGGGRHGNDNEYVQIWTLGASGPVARVRYNQHNGYYFREPGRGAEMHGS
RAVVYIGKIAHGAYHRGCTGGKFWQTLIPNSGTDFCVGGCGYWDDFRNSE
DSNFVLDTGSLRKDRSPREIDCDVPNCTPGHNSWRSLASAACFGLDN*
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