Ggra10722.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10722.t1
Unique NameGgra10722.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length375
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10722.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 286..309
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 310..374
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..77
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 286..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:768692..769816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10722.t1Ggra10722.t1Gracilaria gracilis GNS1m malemRNAtig00000888_pilon 768692..769816 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10722.t1 ID=Ggra10722.t1|Name=Ggra10722.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=375bp
MVFIPFTALQTSLVVTIFVILAELMAASVFYAFLRVFETRLLRKGASVSL
HRHRRRFKIIAIALMLSFVGLEFFYSLSSSTQFRKQFGSQPCVSLIPQSE
NVEQAEVEDRDTEADVITFSCLTLNGTTGSQAVGNFSLVSSHVSCSAEPL
YSFKISERVTRVRPNDMKQCRQTPLARPPFMPPLDTNAAQEFETVCVFYD
LEDDMLFLRTSTDAEDDEGEAEFLPTRLSFNASSSFLSEVAERLLDTYLS
GASVDDFLFRRTMITKIVRRSCRTEIGQKEGTDVPVYVIAAFATIGVAVL
FNFVWALWVSWKWELVDLSDPFLWTENYEGRFQSNRVRVEMSQEDGKLFA
SDISMAPLTTWTPPVENMIQPDLL*
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