Ggra10722.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10722.t1
Unique NameGgra10722.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length375
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:768692..769816 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10722Ggra10722Gracilaria gracilis GNS1m malegenetig00000888_pilon 768692..769816 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10722.t1.start1Ggra10722.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000888_pilon 768692..768694 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10722.t1.CDS1Ggra10722.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000888_pilon 768692..769816 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10722.t1.exon1Ggra10722.t1.exon1Gracilaria gracilis GNS1m maleexontig00000888_pilon 768692..769816 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10722.t1.stop1Ggra10722.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000888_pilon 769814..769816 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10722.t1Ggra10722.t1Gracilaria gracilis GNS1m malepolypeptidetig00000888_pilon 768692..769816 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10722.t1 ID=Ggra10722.t1|Name=Ggra10722.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=375bp
MVFIPFTALQTSLVVTIFVILAELMAASVFYAFLRVFETRLLRKGASVSL
HRHRRRFKIIAIALMLSFVGLEFFYSLSSSTQFRKQFGSQPCVSLIPQSE
NVEQAEVEDRDTEADVITFSCLTLNGTTGSQAVGNFSLVSSHVSCSAEPL
YSFKISERVTRVRPNDMKQCRQTPLARPPFMPPLDTNAAQEFETVCVFYD
LEDDMLFLRTSTDAEDDEGEAEFLPTRLSFNASSSFLSEVAERLLDTYLS
GASVDDFLFRRTMITKIVRRSCRTEIGQKEGTDVPVYVIAAFATIGVAVL
FNFVWALWVSWKWELVDLSDPFLWTENYEGRFQSNRVRVEMSQEDGKLFA
SDISMAPLTTWTPPVENMIQPDLL*
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spliced messenger RNA

>Ggra10722.t1 ID=Ggra10722.t1|Name=Ggra10722.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1125bp|location=Sequence derived from alignment at tig00000888_pilon:768692..769816+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTATTTATTCCATTCACAGCTCTGCAGACAAGTTTAGTTGTCACCAT
TTTCGTCATTCTGGCAGAATTGATGGCCGCTTCCGTTTTCTACGCCTTCC
TTCGTGTTTTCGAAACGCGCTTACTTCGAAAAGGTGCTTCAGTTTCTCTT
CATCGCCACCGGCGACGATTCAAAATCATCGCAATCGCATTGATGTTATC
TTTTGTGGGTTTGGAATTTTTCTATTCACTGTCTTCCAGTACACAGTTCA
GAAAGCAGTTTGGGTCCCAACCTTGCGTATCTTTGATACCACAATCGGAA
AACGTTGAACAAGCCGAAGTCGAGGATCGTGATACTGAGGCGGACGTGAT
TACGTTCAGTTGTCTCACATTGAATGGAACAACAGGCAGTCAGGCTGTTG
GAAATTTCAGTTTGGTTTCATCACACGTATCTTGTTCGGCTGAGCCTTTG
TACAGTTTTAAAATTTCCGAACGAGTGACAAGAGTCAGACCAAATGATAT
GAAGCAATGTCGACAAACCCCTCTTGCAAGACCCCCATTTATGCCGCCAT
TGGATACGAACGCAGCACAAGAATTCGAAACCGTATGTGTCTTTTATGAT
TTGGAAGATGATATGTTGTTTCTACGAACGAGCACTGATGCCGAGGATGA
CGAAGGGGAGGCCGAGTTTTTGCCAACTAGGTTGTCTTTCAACGCATCTT
CATCTTTCTTATCCGAGGTTGCAGAACGTTTGTTGGACACGTATTTATCT
GGAGCAAGTGTAGATGACTTCCTCTTTAGAAGGACAATGATTACCAAGAT
CGTTCGCAGAAGCTGCAGAACTGAGATTGGACAGAAAGAAGGTACCGATG
TTCCTGTGTATGTGATTGCAGCTTTCGCAACAATCGGGGTTGCCGTACTC
TTTAATTTTGTGTGGGCTTTGTGGGTTAGTTGGAAATGGGAACTTGTCGA
TCTGAGTGATCCATTTTTGTGGACTGAGAATTACGAGGGCCGTTTTCAAT
CGAACAGAGTCAGAGTCGAAATGAGCCAAGAAGATGGCAAACTGTTTGCT
TCTGATATTTCAATGGCTCCACTGACAACATGGACACCACCAGTGGAAAA
CATGATTCAGCCTGATCTTTTGTGA
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protein sequence of Ggra10722.t1

>Ggra10722.t1 ID=Ggra10722.t1|Name=Ggra10722.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=375bp
MVFIPFTALQTSLVVTIFVILAELMAASVFYAFLRVFETRLLRKGASVSL
HRHRRRFKIIAIALMLSFVGLEFFYSLSSSTQFRKQFGSQPCVSLIPQSE
NVEQAEVEDRDTEADVITFSCLTLNGTTGSQAVGNFSLVSSHVSCSAEPL
YSFKISERVTRVRPNDMKQCRQTPLARPPFMPPLDTNAAQEFETVCVFYD
LEDDMLFLRTSTDAEDDEGEAEFLPTRLSFNASSSFLSEVAERLLDTYLS
GASVDDFLFRRTMITKIVRRSCRTEIGQKEGTDVPVYVIAAFATIGVAVL
FNFVWALWVSWKWELVDLSDPFLWTENYEGRFQSNRVRVEMSQEDGKLFA
SDISMAPLTTWTPPVENMIQPDLL*
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mRNA from alignment at tig00000888_pilon:768692..769816+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10722.t1 ID=Ggra10722.t1|Name=Ggra10722.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1125bp|location=Sequence derived from alignment at tig00000888_pilon:768692..769816+ (Gracilaria gracilis GNS1m male)
ATGGTATTTATTCCATTCACAGCTCTGCAGACAAGTTTAGTTGTCACCAT
TTTCGTCATTCTGGCAGAATTGATGGCCGCTTCCGTTTTCTACGCCTTCC
TTCGTGTTTTCGAAACGCGCTTACTTCGAAAAGGTGCTTCAGTTTCTCTT
CATCGCCACCGGCGACGATTCAAAATCATCGCAATCGCATTGATGTTATC
TTTTGTGGGTTTGGAATTTTTCTATTCACTGTCTTCCAGTACACAGTTCA
GAAAGCAGTTTGGGTCCCAACCTTGCGTATCTTTGATACCACAATCGGAA
AACGTTGAACAAGCCGAAGTCGAGGATCGTGATACTGAGGCGGACGTGAT
TACGTTCAGTTGTCTCACATTGAATGGAACAACAGGCAGTCAGGCTGTTG
GAAATTTCAGTTTGGTTTCATCACACGTATCTTGTTCGGCTGAGCCTTTG
TACAGTTTTAAAATTTCCGAACGAGTGACAAGAGTCAGACCAAATGATAT
GAAGCAATGTCGACAAACCCCTCTTGCAAGACCCCCATTTATGCCGCCAT
TGGATACGAACGCAGCACAAGAATTCGAAACCGTATGTGTCTTTTATGAT
TTGGAAGATGATATGTTGTTTCTACGAACGAGCACTGATGCCGAGGATGA
CGAAGGGGAGGCCGAGTTTTTGCCAACTAGGTTGTCTTTCAACGCATCTT
CATCTTTCTTATCCGAGGTTGCAGAACGTTTGTTGGACACGTATTTATCT
GGAGCAAGTGTAGATGACTTCCTCTTTAGAAGGACAATGATTACCAAGAT
CGTTCGCAGAAGCTGCAGAACTGAGATTGGACAGAAAGAAGGTACCGATG
TTCCTGTGTATGTGATTGCAGCTTTCGCAACAATCGGGGTTGCCGTACTC
TTTAATTTTGTGTGGGCTTTGTGGGTTAGTTGGAAATGGGAACTTGTCGA
TCTGAGTGATCCATTTTTGTGGACTGAGAATTACGAGGGCCGTTTTCAAT
CGAACAGAGTCAGAGTCGAAATGAGCCAAGAAGATGGCAAACTGTTTGCT
TCTGATATTTCAATGGCTCCACTGACAACATGGACACCACCAGTGGAAAA
CATGATTCAGCCTGATCTTTTGTGA
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Coding sequence (CDS) from alignment at tig00000888_pilon:768692..769816+

>Ggra10722.t1 ID=Ggra10722.t1|Name=Ggra10722.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1125bp|location=Sequence derived from alignment at tig00000888_pilon:768692..769816+ (Gracilaria gracilis GNS1m male)
ATGGTATTTATTCCATTCACAGCTCTGCAGACAAGTTTAGTTGTCACCAT
TTTCGTCATTCTGGCAGAATTGATGGCCGCTTCCGTTTTCTACGCCTTCC
TTCGTGTTTTCGAAACGCGCTTACTTCGAAAAGGTGCTTCAGTTTCTCTT
CATCGCCACCGGCGACGATTCAAAATCATCGCAATCGCATTGATGTTATC
TTTTGTGGGTTTGGAATTTTTCTATTCACTGTCTTCCAGTACACAGTTCA
GAAAGCAGTTTGGGTCCCAACCTTGCGTATCTTTGATACCACAATCGGAA
AACGTTGAACAAGCCGAAGTCGAGGATCGTGATACTGAGGCGGACGTGAT
TACGTTCAGTTGTCTCACATTGAATGGAACAACAGGCAGTCAGGCTGTTG
GAAATTTCAGTTTGGTTTCATCACACGTATCTTGTTCGGCTGAGCCTTTG
TACAGTTTTAAAATTTCCGAACGAGTGACAAGAGTCAGACCAAATGATAT
GAAGCAATGTCGACAAACCCCTCTTGCAAGACCCCCATTTATGCCGCCAT
TGGATACGAACGCAGCACAAGAATTCGAAACCGTATGTGTCTTTTATGAT
TTGGAAGATGATATGTTGTTTCTACGAACGAGCACTGATGCCGAGGATGA
CGAAGGGGAGGCCGAGTTTTTGCCAACTAGGTTGTCTTTCAACGCATCTT
CATCTTTCTTATCCGAGGTTGCAGAACGTTTGTTGGACACGTATTTATCT
GGAGCAAGTGTAGATGACTTCCTCTTTAGAAGGACAATGATTACCAAGAT
CGTTCGCAGAAGCTGCAGAACTGAGATTGGACAGAAAGAAGGTACCGATG
TTCCTGTGTATGTGATTGCAGCTTTCGCAACAATCGGGGTTGCCGTACTC
TTTAATTTTGTGTGGGCTTTGTGGGTTAGTTGGAAATGGGAACTTGTCGA
TCTGAGTGATCCATTTTTGTGGACTGAGAATTACGAGGGCCGTTTTCAAT
CGAACAGAGTCAGAGTCGAAATGAGCCAAGAAGATGGCAAACTGTTTGCT
TCTGATATTTCAATGGCTCCACTGACAACATGGACACCACCAGTGGAAAA
CATGATTCAGCCTGATCTTTTGTGA
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