Ggra10720.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10720.t1
Unique NameGgra10720.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length152
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000888_piloncontigtig00000888_pilon:728910..729365 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10720Ggra10720Gracilaria gracilis GNS1m malegenetig00000888_pilon 728910..729365 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10720.t1.stop1Ggra10720.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000888_pilon 728910..728912 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10720.t1.CDS1Ggra10720.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000888_pilon 728910..729365 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10720.t1.exon1Ggra10720.t1.exon1Gracilaria gracilis GNS1m maleexontig00000888_pilon 728910..729365 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10720.t1.start1Ggra10720.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000888_pilon 729363..729365 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10720.t1Ggra10720.t1Gracilaria gracilis GNS1m malepolypeptidetig00000888_pilon 728910..729365 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10720.t1 ID=Ggra10720.t1|Name=Ggra10720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=152bp
MVRVDMLVLVVVATVWSGSDGRFCTDDTPLPLLLVEEDFEAFNECDVKRL
LRIRTDDFRLFTPRGGVIDGKQAVEQLITDVCKPFPQGFRGLRFSINESI
IAGSSIIVRWVATAPFIEDYYGSDAYFTRGYKLSAGVSTFDALELNITAS
V*
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spliced messenger RNA

>Ggra10720.t1 ID=Ggra10720.t1|Name=Ggra10720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=456bp|location=Sequence derived from alignment at tig00000888_pilon:728910..729365- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGCGCGTTGATATGCTGGTGCTTGTCGTGGTGGCAACTGTGTGGAG
TGGATCTGACGGAAGGTTCTGCACGGATGACACTCCGTTGCCGTTGTTGC
TGGTGGAAGAGGACTTCGAAGCATTCAATGAATGTGACGTCAAACGCCTT
TTACGCATTCGCACCGATGACTTTCGGTTGTTTACACCGCGCGGTGGGGT
GATCGATGGAAAGCAGGCTGTTGAACAATTGATTACTGACGTTTGTAAAC
CTTTCCCGCAGGGGTTTCGGGGACTGAGGTTCAGCATTAATGAAAGCATC
ATTGCTGGTAGTTCGATAATTGTTCGCTGGGTGGCAACGGCACCGTTCAT
TGAAGACTATTACGGTTCCGACGCGTACTTCACTCGTGGATACAAACTGT
CTGCAGGCGTGTCTACTTTTGATGCACTGGAATTGAACATTACGGCTTCA
GTTTGA
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protein sequence of Ggra10720.t1

>Ggra10720.t1 ID=Ggra10720.t1|Name=Ggra10720.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=152bp
MVRVDMLVLVVVATVWSGSDGRFCTDDTPLPLLLVEEDFEAFNECDVKRL
LRIRTDDFRLFTPRGGVIDGKQAVEQLITDVCKPFPQGFRGLRFSINESI
IAGSSIIVRWVATAPFIEDYYGSDAYFTRGYKLSAGVSTFDALELNITAS
V*
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mRNA from alignment at tig00000888_pilon:728910..729365-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10720.t1 ID=Ggra10720.t1|Name=Ggra10720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=456bp|location=Sequence derived from alignment at tig00000888_pilon:728910..729365- (Gracilaria gracilis GNS1m male)
ATGGTGCGCGTTGATATGCTGGTGCTTGTCGTGGTGGCAACTGTGTGGAG
TGGATCTGACGGAAGGTTCTGCACGGATGACACTCCGTTGCCGTTGTTGC
TGGTGGAAGAGGACTTCGAAGCATTCAATGAATGTGACGTCAAACGCCTT
TTACGCATTCGCACCGATGACTTTCGGTTGTTTACACCGCGCGGTGGGGT
GATCGATGGAAAGCAGGCTGTTGAACAATTGATTACTGACGTTTGTAAAC
CTTTCCCGCAGGGGTTTCGGGGACTGAGGTTCAGCATTAATGAAAGCATC
ATTGCTGGTAGTTCGATAATTGTTCGCTGGGTGGCAACGGCACCGTTCAT
TGAAGACTATTACGGTTCCGACGCGTACTTCACTCGTGGATACAAACTGT
CTGCAGGCGTGTCTACTTTTGATGCACTGGAATTGAACATTACGGCTTCA
GTTTGA
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Coding sequence (CDS) from alignment at tig00000888_pilon:728910..729365-

>Ggra10720.t1 ID=Ggra10720.t1|Name=Ggra10720.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=456bp|location=Sequence derived from alignment at tig00000888_pilon:728910..729365- (Gracilaria gracilis GNS1m male)
ATGGTGCGCGTTGATATGCTGGTGCTTGTCGTGGTGGCAACTGTGTGGAG
TGGATCTGACGGAAGGTTCTGCACGGATGACACTCCGTTGCCGTTGTTGC
TGGTGGAAGAGGACTTCGAAGCATTCAATGAATGTGACGTCAAACGCCTT
TTACGCATTCGCACCGATGACTTTCGGTTGTTTACACCGCGCGGTGGGGT
GATCGATGGAAAGCAGGCTGTTGAACAATTGATTACTGACGTTTGTAAAC
CTTTCCCGCAGGGGTTTCGGGGACTGAGGTTCAGCATTAATGAAAGCATC
ATTGCTGGTAGTTCGATAATTGTTCGCTGGGTGGCAACGGCACCGTTCAT
TGAAGACTATTACGGTTCCGACGCGTACTTCACTCGTGGATACAAACTGT
CTGCAGGCGTGTCTACTTTTGATGCACTGGAATTGAACATTACGGCTTCA
GTTTGA
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