Ggra9944.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9944.t1
Unique NameGgra9944.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length379
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:262994..264130 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9944Ggra9944Gracilaria gracilis GNS1m malegenetig00000887_pilon 262994..264130 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9944.t1.start1Ggra9944.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000887_pilon 262994..262996 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9944.t1.CDS1Ggra9944.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000887_pilon 262994..264130 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9944.t1.exon1Ggra9944.t1.exon1Gracilaria gracilis GNS1m maleexontig00000887_pilon 262994..264130 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9944.t1.stop1Ggra9944.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000887_pilon 264128..264130 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9944.t1Ggra9944.t1Gracilaria gracilis GNS1m malepolypeptidetig00000887_pilon 262994..264130 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9944.t1 ID=Ggra9944.t1|Name=Ggra9944.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=379bp
MVGRRTSRYTPLKCLWFGTKPALYTIAGLLTICLFLSEAFMTEIIDSGRG
PSPPPFRPGNLHLSDLSEDGMKKMSKSSLRMTAHLIPQDPNIKNKGVNGE
EKPYKVARNSRKTTRKVKRKDLQVHGAAFSIEEFKKKAQEKVIEDSIRKR
ERALAVKYQKSGRDVKEVTPMVHRPHVDFHGVQRNSENTHLFKADNITHL
SYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPD
DDYLITGILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRA
WKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPYRFDEPLR
VVNDMSGDPSLRKQLLLYDLKGMRSGVL*
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spliced messenger RNA

>Ggra9944.t1 ID=Ggra9944.t1|Name=Ggra9944.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1137bp|location=Sequence derived from alignment at tig00000887_pilon:262994..264130+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGGGAGAAGGACTTCTAGGTATACACCTTTGAAATGCCTGTGGTT
CGGCACAAAACCTGCCTTGTACACCATCGCTGGCTTGCTCACGATATGTC
TTTTTCTTTCGGAGGCCTTCATGACCGAAATCATTGATTCAGGAAGGGGT
CCCTCTCCGCCGCCCTTCCGTCCTGGAAACCTTCACCTTTCCGATTTAAG
TGAAGATGGAATGAAAAAGATGTCCAAATCTTCACTTAGAATGACCGCCC
ACCTCATCCCTCAGGACCCAAACATAAAGAACAAAGGGGTGAACGGGGAA
GAGAAGCCATATAAGGTCGCCCGAAACTCTAGGAAAACGACAAGAAAGGT
TAAGCGCAAGGACCTACAAGTTCATGGTGCTGCGTTCAGTATCGAGGAGT
TTAAGAAGAAGGCCCAGGAAAAAGTCATTGAAGATTCAATAAGGAAAAGA
GAACGAGCATTAGCTGTTAAATACCAGAAGTCTGGCCGTGACGTGAAAGA
GGTCACCCCAATGGTTCATAGACCGCATGTAGACTTTCACGGTGTTCAAA
GAAACTCTGAGAATACTCATTTATTCAAAGCCGATAACATAACTCATCTA
TCGTATATGGTGTACAGACTAATCAAGACGCATAAGATATCCAGTGTGAT
TGATGTTCCGTGTACGGGAAGTACAATTTGGATGCCTGAGCTTCTGAAGA
TCCTTGAATTTGAAGTCCCTGGTTTCCATTATCGATGTGTTGTTCCTGAT
GACGACTATCTTATAACTGGAATCCTTCAATACAAGGACTATAGCTCAGC
TACTGTTGTGAAGGATCCCCATGCCTGGGCGTCGAAGCATCCAATGGCTG
ACCTAGCTTTTGTTTGGTACGGATTTGGGTATTTGTCTCCACAACGGGCG
TGGAAGTTGATGAAGTCCTTACGAAAGTCGAAAACGAAGTATGCCATTGT
ACCGAACTTTCCCAATGTGGCACACAATCCAGGATCGGCGAGCAAAAGCG
GGCATGTGAATGTTCGCCGTGCCCCATATCGCTTCGATGAACCACTACGA
GTTGTCAATGACATGAGCGGAGATCCATCCCTTCGCAAGCAACTCTTGCT
ATATGATTTGAAGGGTATGAGATCAGGTGTCTTGTAA
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protein sequence of Ggra9944.t1

>Ggra9944.t1 ID=Ggra9944.t1|Name=Ggra9944.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=379bp
MVGRRTSRYTPLKCLWFGTKPALYTIAGLLTICLFLSEAFMTEIIDSGRG
PSPPPFRPGNLHLSDLSEDGMKKMSKSSLRMTAHLIPQDPNIKNKGVNGE
EKPYKVARNSRKTTRKVKRKDLQVHGAAFSIEEFKKKAQEKVIEDSIRKR
ERALAVKYQKSGRDVKEVTPMVHRPHVDFHGVQRNSENTHLFKADNITHL
SYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPD
DDYLITGILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRA
WKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPYRFDEPLR
VVNDMSGDPSLRKQLLLYDLKGMRSGVL*
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mRNA from alignment at tig00000887_pilon:262994..264130+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9944.t1 ID=Ggra9944.t1|Name=Ggra9944.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1137bp|location=Sequence derived from alignment at tig00000887_pilon:262994..264130+ (Gracilaria gracilis GNS1m male)
ATGGTAGGGAGAAGGACTTCTAGGTATACACCTTTGAAATGCCTGTGGTT
CGGCACAAAACCTGCCTTGTACACCATCGCTGGCTTGCTCACGATATGTC
TTTTTCTTTCGGAGGCCTTCATGACCGAAATCATTGATTCAGGAAGGGGT
CCCTCTCCGCCGCCCTTCCGTCCTGGAAACCTTCACCTTTCCGATTTAAG
TGAAGATGGAATGAAAAAGATGTCCAAATCTTCACTTAGAATGACCGCCC
ACCTCATCCCTCAGGACCCAAACATAAAGAACAAAGGGGTGAACGGGGAA
GAGAAGCCATATAAGGTCGCCCGAAACTCTAGGAAAACGACAAGAAAGGT
TAAGCGCAAGGACCTACAAGTTCATGGTGCTGCGTTCAGTATCGAGGAGT
TTAAGAAGAAGGCCCAGGAAAAAGTCATTGAAGATTCAATAAGGAAAAGA
GAACGAGCATTAGCTGTTAAATACCAGAAGTCTGGCCGTGACGTGAAAGA
GGTCACCCCAATGGTTCATAGACCGCATGTAGACTTTCACGGTGTTCAAA
GAAACTCTGAGAATACTCATTTATTCAAAGCCGATAACATAACTCATCTA
TCGTATATGGTGTACAGACTAATCAAGACGCATAAGATATCCAGTGTGAT
TGATGTTCCGTGTACGGGAAGTACAATTTGGATGCCTGAGCTTCTGAAGA
TCCTTGAATTTGAAGTCCCTGGTTTCCATTATCGATGTGTTGTTCCTGAT
GACGACTATCTTATAACTGGAATCCTTCAATACAAGGACTATAGCTCAGC
TACTGTTGTGAAGGATCCCCATGCCTGGGCGTCGAAGCATCCAATGGCTG
ACCTAGCTTTTGTTTGGTACGGATTTGGGTATTTGTCTCCACAACGGGCG
TGGAAGTTGATGAAGTCCTTACGAAAGTCGAAAACGAAGTATGCCATTGT
ACCGAACTTTCCCAATGTGGCACACAATCCAGGATCGGCGAGCAAAAGCG
GGCATGTGAATGTTCGCCGTGCCCCATATCGCTTCGATGAACCACTACGA
GTTGTCAATGACATGAGCGGAGATCCATCCCTTCGCAAGCAACTCTTGCT
ATATGATTTGAAGGGTATGAGATCAGGTGTCTTGTAA
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Coding sequence (CDS) from alignment at tig00000887_pilon:262994..264130+

>Ggra9944.t1 ID=Ggra9944.t1|Name=Ggra9944.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1137bp|location=Sequence derived from alignment at tig00000887_pilon:262994..264130+ (Gracilaria gracilis GNS1m male)
ATGGTAGGGAGAAGGACTTCTAGGTATACACCTTTGAAATGCCTGTGGTT
CGGCACAAAACCTGCCTTGTACACCATCGCTGGCTTGCTCACGATATGTC
TTTTTCTTTCGGAGGCCTTCATGACCGAAATCATTGATTCAGGAAGGGGT
CCCTCTCCGCCGCCCTTCCGTCCTGGAAACCTTCACCTTTCCGATTTAAG
TGAAGATGGAATGAAAAAGATGTCCAAATCTTCACTTAGAATGACCGCCC
ACCTCATCCCTCAGGACCCAAACATAAAGAACAAAGGGGTGAACGGGGAA
GAGAAGCCATATAAGGTCGCCCGAAACTCTAGGAAAACGACAAGAAAGGT
TAAGCGCAAGGACCTACAAGTTCATGGTGCTGCGTTCAGTATCGAGGAGT
TTAAGAAGAAGGCCCAGGAAAAAGTCATTGAAGATTCAATAAGGAAAAGA
GAACGAGCATTAGCTGTTAAATACCAGAAGTCTGGCCGTGACGTGAAAGA
GGTCACCCCAATGGTTCATAGACCGCATGTAGACTTTCACGGTGTTCAAA
GAAACTCTGAGAATACTCATTTATTCAAAGCCGATAACATAACTCATCTA
TCGTATATGGTGTACAGACTAATCAAGACGCATAAGATATCCAGTGTGAT
TGATGTTCCGTGTACGGGAAGTACAATTTGGATGCCTGAGCTTCTGAAGA
TCCTTGAATTTGAAGTCCCTGGTTTCCATTATCGATGTGTTGTTCCTGAT
GACGACTATCTTATAACTGGAATCCTTCAATACAAGGACTATAGCTCAGC
TACTGTTGTGAAGGATCCCCATGCCTGGGCGTCGAAGCATCCAATGGCTG
ACCTAGCTTTTGTTTGGTACGGATTTGGGTATTTGTCTCCACAACGGGCG
TGGAAGTTGATGAAGTCCTTACGAAAGTCGAAAACGAAGTATGCCATTGT
ACCGAACTTTCCCAATGTGGCACACAATCCAGGATCGGCGAGCAAAAGCG
GGCATGTGAATGTTCGCCGTGCCCCATATCGCTTCGATGAACCACTACGA
GTTGTCAATGACATGAGCGGAGATCCATCCCTTCGCAAGCAACTCTTGCT
ATATGATTTGAAGGGTATGAGATCAGGTGTCTTGTAA
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