Ggra9944.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9944.t1
Unique NameGgra9944.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length379
Homology
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A2V3J1P9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1P9_9FLOR)

HSP 1 Score: 459 bits (1181), Expect = 1.410e-158
Identity = 233/382 (60.99%), Postives = 289/382 (75.65%), Query Frame = 0
Query:    1 MVGRRTSRYTPLKCLWFGTKPALYTIAGLLTICLFLSEAFMTEIIDSGRGPSPPPFRPGNL-HLSDLSEDGMKKMSKSSLRMTAHLIPQDPNIKNKGVNG-EEKPYKVARNSRKTTRKVKRKDLQVHGAAFSIEEFKKKAQEKVIEDSIRKRERALAVKYQKSG--RDVKEVTPMVHRPHVDFHGVQRNSENTHLFKADNITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPDDDYLITGILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPYRFDEPLRVVNDMSGDPSLRKQLLLYDLKGMRSGVL 378
            M+ RRT RY   KCLW  T+  LY I  LLT  +F SEAF+ + IDS         R GNL  L  L ED ++++ +SS+RMT H  P  P ++   +    ++   V+R+S+       + D+++ G   S+EEFKKKAQ K +EDS+RKRER LA+K ++S   RD  +     HRPH  F GVQRN EN HLFK DN+THLS+M+YRLIKTH+I+SV+DVPC+ ST+WMPELLKILEFEVPGFHYRC+VPDD YL+ G+L+YKD+SSAT+VKD +AWASK P AD+A VWYG GY+SPQRAWKL+K+LRKSKTKY +VPNFP+V+HNPGSASK GHVNVRRAPYRFDEPLRVVN+MSGDPS+RKQLLLY+L G+RSGVL
Sbjct:    1 MIARRTPRYLRHKCLWISTQSTLYAITALLTCGIFFSEAFIPDTIDSNGHLFSLASRSGNLTQLIQLKEDELQEIPRSSVRMTVH--PAIPEMRKPPMGRMTDRARNVSRSSKSKRNLTGQTDMRLRGTMVSVEEFKKKAQAKALEDSVRKRERLLAMKNRRSNNSRDEAKGGLNFHRPHSGFRGVQRNEENAHLFKDDNVTHLSFMLYRLIKTHQIASVLDVPCSASTLWMPELLKILEFEVPGFHYRCIVPDDQYLVEGVLRYKDFSSATIVKDENAWASKLPRADVALVWYGLGYMSPQRAWKLIKALRKSKTKYVVVPNFPDVSHNPGSASKYGHVNVRRAPYRFDEPLRVVNNMSGDPSIRKQLLLYELGGIRSGVL 380          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A1X6PF04 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PF04_PORUM)

HSP 1 Score: 103 bits (257), Expect = 1.810e-20
Identity = 65/201 (32.34%), Postives = 104/201 (51.74%), Query Frame = 0
Query:  178 DFHGVQRNSENTHLFKADNITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPDDDYLITGILQYKDYSSAT-VVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFP--NVAHNPGSASKSGHV---NVRRAPYRFDE-PLRVVNDMSGDPSLR-KQLLLYDL 370
            +FHGV          K D++T LS+M++R+IKT+ I S++DVPC     WMP+LL  L++++P FHY CV      +        D      +V+D   WA + P ADL F W G      +   +L+ ++  S  KY ++ +    N  H  G+A     V   N R+AP+R  + P+RV+ +++   +   + LLLY +
Sbjct:  358 NFHGVPAQPHQ----KTDDVTRLSFMLWRVIKTYHIKSMVDVPCRAHGSWMPQLLARLDYDLPDFHYTCVDASPRVVKGARAAVGDLVDGHFLVRD--WWARRLPPADLVFAWRGLDTAPAEHVHRLLSAVPASGAKYLLLGSADTHNDGHGAGAAGGKKWVPPINFRKAPFRLPQHPMRVIKEVTLPSAAHSRSLLLYQV 552          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A1X6NIE4 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIE4_PORUM)

HSP 1 Score: 99.4 bits (246), Expect = 3.500e-20
Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 0
Query:  196 NITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEV-PGFHYRCVVPDDDYLITGILQ--YKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPYRFDEPLRVVNDMSGDPSLRKQLLLYD 369
            N+THLSYMVY+LIK + + S++D+PC  +  WMP +++ L+FE+  GF Y CV  D D    G  Q  Y        +        K P ADL F + G      + +W   K++R+S  +  +  N P V +   +A     +NVR+ P+ F    RV++ ++       QLLLYD
Sbjct:  104 NVTHLSYMVYKLIKANHVQSMVDMPCRTTVSWMPAVVQRLQFELHTGFKYICV--DADQRSHGDFQAAYAHVDGVEFLHFSPTEEGKMPTADLVFSYKGLQRWGVKNSWAFFKTVRESAPRLVLFTNSPGVDNLSQTADV---LNVRKPPFHFGLSQRVISSLTTASDHPMQLLLYD 275          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A7S1ER73 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER73_9RHOD)

HSP 1 Score: 97.4 bits (241), Expect = 4.350e-20
Identity = 63/208 (30.29%), Postives = 110/208 (52.88%), Query Frame = 0
Query:  179 FHGVQRNSENTHLFKAD-NITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPD--DDYLIT---GILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIV---PNFPNVAHNPG-SASKSGHVNVRRAPYRFDEPLRVVNDMSGDPSLR--KQLLLYDLKGMR 374
            FHG+    E    F  D NI+ +S+M++R++KT+K+ +++D PCT +  WMP+L+ +L+ E+ GF Y CV+ +  DD  +    G     +     ++  P     + P  DL F WY   + +  + W L+   RK  +KY +V   P + N+  N   + +  G VN+R  P+  D P + + +++   S    +QLLL+D+  M+
Sbjct:    2 FHGLDIGDEG---FVGDFNISRVSFMLFRIMKTNKLKALVDFPCTSTLSWMPQLVSVLDKEISGFFYTCVILEESDDSRVRKAFGAEYELEVLHFPLLTRPQG-NVRFPPCDLMFSWYTIQFWNIHKTWNLITLARKV-SKYFLVTSSPGYNNLKINSKMNNTAQGSVNLRSQPFLIDVPEKTIGNITRKNSSTPMQQLLLWDISTMK 204          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A7S1ERB7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERB7_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 7.190e-19
Identity = 63/208 (30.29%), Postives = 111/208 (53.37%), Query Frame = 0
Query:  179 FHGVQRNSENTHLFKAD-NITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPD--DDYLIT---GILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIV---PNFPNVAHNPG-SASKSGHVNVRRAPYRFDEPLRVVNDMSGDPSLR--KQLLLYDLKGMR 374
            FHG++   E    F  D NI+ +S+M++R++KT+K+ +++D PCT +  WMP+L+ +L+ E+ GF Y CV+ +  DD  +    G     +     ++  P     + P  DL F WY   + +  + W L+   RK  +KY +V   P + N+  N   + +  G VN+R  P+  D P + + +++   S    +QLLL+D+  M+
Sbjct:  245 FHGLEIGDEG---FVGDFNISRVSFMLFRIMKTNKLKALVDFPCTSTLSWMPQLVSVLDKEISGFFYTCVILEESDDSRVRKAFGAEYELEVLHFPLLTRPQG-NVRFPPCDLMFSWYTIQFWNIHKTWNLITLARKV-SKYFLVTSSPGYNNLKINSKMNNTAQGSVNLRSQPFLIDVPEKTIGNITRKNSSTPMQQLLLWDISTMK 447          
BLAST of Ggra9944.t1 vs. uniprot
Match: R7QRJ5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRJ5_CHOCR)

HSP 1 Score: 95.5 bits (236), Expect = 6.900e-18
Identity = 55/166 (33.13%), Postives = 85/166 (51.20%), Query Frame = 0
Query:  181 GVQRNSENTHLFKAD--NITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPDDDYLITGI-LQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPY 343
            G+Q+     +L   D  NITHLSYMV+++IK + I SV+D+PC  +  W P+LL+ ++FEV GF Y CV   D Y    I  ++ D  S   +      A   P  DL F W G      + +W    +L + +  Y ++ N P  ++   S    G +N+R+ P+
Sbjct:  288 GIQKEFSGVNLEARDGTNITHLSYMVFKIIKNYDIKSVVDIPCRNTLSWFPKLLERIDFEVAGFKYYCV-DTDSYSKDDIQTKFSDAGSPETLHISPEEAHFLPKTDLVFSWDGPQQWGVRTSWTFFTALMEIRPTYLLITNNPTASNTDDS---KGVMNLRKQPF 449          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A1X6NJ60 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJ60_PORUM)

HSP 1 Score: 88.2 bits (217), Expect = 4.260e-17
Identity = 50/176 (28.41%), Postives = 82/176 (46.59%), Query Frame = 0
Query:  203 MVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPG-FHYRCVVPDDDYLITGILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPYRFDEPLRVVNDMSGDPSLRKQLLLYDLKGMRSGV 377
            MVY+LI++ ++ SVI +PC  + +WMP ++  LEFE PG     CV    +     ++   + + A +V          P A +   WYGF     + +W  + ++++    +    N     +      +   +NVR+APY    P RVV  +S  P     L+LYD   MR G+
Sbjct:    1 MVYKLIQSVEVRSVIVMPCRTTALWMPAVVTHLEFETPGGLKVTCVDTTPEVSQARLISAFNDTGAVIVNGTLETIPALPKAQMVVSWYGFQEWGVRGSWDFLGAIKQHGVDWVAFNNHGTATNGETPGGRKA-INVRKAPYHLGAPARVVKGVSLAPDSDLSLVLYDTSNMREGM 175          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A5J4Z881 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z881_PORPP)

HSP 1 Score: 89.4 bits (220), Expect = 7.340e-16
Identity = 54/186 (29.03%), Postives = 95/186 (51.08%), Query Frame = 0
Query:  196 NITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHY-----------RCVVPDDDYLITGILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPYRFDEPLRVVNDMSGDPSLRKQLLLYDL 370
            N+T +SYM++R+++ +K++S+ID PC+ +  +M  L + L+FE+  F Y            C +  ++  +TG+    D  +   + D       +P ADL F + GF    P+ A   +K+LR+S+  Y +  N P    N     + G +NVRRAP+ FD P + + ++  +   R   +  DL
Sbjct:  245 NVTRVSYMIFRVMRMYKLTSLIDFPCSTTRHYMAYLAERLDFELQDFKYYALDVGYEEMRSCKLAFEEASVTGLSSQFDLIT---ISD----RMMYPKADLLFSFDGFQKWGPKAAMIALKALRRSQVPYVMFTNNPGAVGN----LEPGLINVRRAPFHFDGPTKAIRNIMREEDERDAKVAEDL 419          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A7S0T5M6 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T5M6_9RHOD)

HSP 1 Score: 85.9 bits (211), Expect = 4.810e-15
Identity = 59/206 (28.64%), Postives = 103/206 (50.00%), Query Frame = 0
Query:  196 NITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPDDDYLITGILQYKDYS--SATVVKDPHAW---------ASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFPNVAH--NPGSASKSGHVNVRRAPYRFDEPLRVV------NDMS--GDPSL--RKQLLLYDLKGMRSGVL 378
            NIT +S+++ R+++ +KISS+ID PCT +  WMP L++ L++E+  F Y          +     Y+D+    + + K    W          ++ P +DL F + GF  +  +  W L+ +L +S T +A+  N P   +  + G+A +   +NVRR P+    P + +      +D+S   DP+    K L  Y+   MR GV+
Sbjct:  146 NITRVSFLLLRIMRQYKISSIIDFPCTHTMHWMPALVERLDYEISNFRY----------VGMETAYEDFRRCKSELEKVSGNWRVEMLAISRTTRLPPSDLLFSFDGFQKIGVRSTWNLLHALTRSNTPFAMFTNNPGRGNQGSGGAAKEELVLNVRRPPFHLHPPQKAIRFITREDDVSRANDPTFVPSKVLYFYERARMRPGVI 341          
BLAST of Ggra9944.t1 vs. uniprot
Match: A0A7S0ZDW6 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDW6_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 9.830e-14
Identity = 42/130 (32.31%), Postives = 74/130 (56.92%), Query Frame = 0
Query:  196 NITHLSYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPDDDYLITGILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRAWKLMKSLRKSKTKYAIVPNFPNVAH 325
            N+T LS+ ++RL+K+ ++ S+ID PC+ +  WMP+L+  LEFE+PGF+Y C+ P+   +     +++ Y    VV  P       P +D+ F W G  Y   + ++ L++  R S +K  ++   P V +
Sbjct:  363 NVTKLSFSLFRLMKSKRLFSLIDFPCSSNLDWMPQLVVRLEFEMPGFYYTCMEPEGSRIEEIKRRFQPYVDPDVVVWPLNQQRPMPRSDVVFSWNGVQYWDMRESFNLVRMARLS-SKMLMMSTNPKVTN 491          
The following BLAST results are available for this feature:
BLAST of Ggra9944.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3J1P91.410e-15860.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PF041.810e-2032.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NIE43.500e-2033.90Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A7S1ER734.350e-2030.29Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1ERB77.190e-1930.29Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
R7QRJ56.900e-1833.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NJ604.260e-1728.41Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z8817.340e-1629.03Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0T5M64.810e-1528.64Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0ZDW69.830e-1432.31Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..378
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:262994..264130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9944.t1Ggra9944.t1Gracilaria gracilis GNS1m malemRNAtig00000887_pilon 262994..264130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9944.t1 ID=Ggra9944.t1|Name=Ggra9944.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=379bp
MVGRRTSRYTPLKCLWFGTKPALYTIAGLLTICLFLSEAFMTEIIDSGRG
PSPPPFRPGNLHLSDLSEDGMKKMSKSSLRMTAHLIPQDPNIKNKGVNGE
EKPYKVARNSRKTTRKVKRKDLQVHGAAFSIEEFKKKAQEKVIEDSIRKR
ERALAVKYQKSGRDVKEVTPMVHRPHVDFHGVQRNSENTHLFKADNITHL
SYMVYRLIKTHKISSVIDVPCTGSTIWMPELLKILEFEVPGFHYRCVVPD
DDYLITGILQYKDYSSATVVKDPHAWASKHPMADLAFVWYGFGYLSPQRA
WKLMKSLRKSKTKYAIVPNFPNVAHNPGSASKSGHVNVRRAPYRFDEPLR
VVNDMSGDPSLRKQLLLYDLKGMRSGVL*
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