Ggra9903.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9903.t1 ID=Ggra9903.t1|Name=Ggra9903.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=644bp
MMRFAFRARQRKDAVPPAPPDRHAEPPRKKTFAPRLAALNSFSKLGASAN
HSFVSIKPKPSATTPNTNVNNASAQNVIPNARQSSSPLSVLVNYDLHPTR
NHSGHALEYANYTPSRFFVAPTTRTHRRPRHATNASFFSSALALDYDTMA
RRAAPFQPDFLPLHKRIQARIVRLRQLLMEGDRIGDLQMLKDLAEILQAN
IARHQTQAESKRSQIKHAQIVAGFVDRRNHVIHIKKVSGKPSTFRSRTTS
ALKLRAASMRSSSRHPRNGAENKQRIRPEMNQRRCDDLGAQKGKSDFSRL
TRKSSAHLRRLHSAGAVLMRKLSKSPAPTHHAACSPDSAPSSTPVLDPET
IKKLKTDPAPIINDFQMELQAIEQEGLLDRAKLDEVESQLDQRRRIHEEA
MDILDQFYGALPGWENDPISQKMILETVELTEAGVDAERDLTESRDVFLR
AEAALADHQRAHRALQAIRSDLTSFVQILSDLIASADVIVETRGRANTPT
RQRRYSLDVQTEAGEGVLDTFSHLERLLDRCIGQSRLAVECCCEAPRVQN
LQDDMEQISAGFALEADAVKKNGTIYHDDLEPTLQVSVTALGDCKLAEGF
VSERQDLISEDLKPLRNQLERSEEYVMLERLAILDLRHPRDDR*
back to top

spliced messenger RNA

>Ggra9903.t1 ID=Ggra9903.t1|Name=Ggra9903.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1932bp|location=Sequence derived from alignment at tig00000887_pilon:50518..52449- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGCGATTCGCGTTTCGCGCTCGCCAGCGCAAGGACGCTGTGCCGCC
CGCACCGCCCGACCGCCACGCAGAGCCACCCAGGAAGAAGACCTTTGCCC
CACGTCTCGCCGCCCTCAACTCCTTTTCCAAGCTGGGCGCTTCCGCCAAT
CATTCCTTCGTCTCCATCAAGCCCAAGCCCTCAGCCACCACCCCCAACAC
CAACGTCAACAACGCCTCGGCTCAAAATGTCATCCCCAACGCTCGCCAGT
CCTCGTCCCCGCTGTCTGTCCTCGTCAACTACGACCTGCATCCCACTCGA
AACCACTCTGGTCACGCTCTAGAGTACGCCAACTACACTCCGTCCCGGTT
CTTTGTTGCTCCAACCACCCGCACTCATCGCCGACCCCGTCATGCTACCA
ACGCCTCGTTTTTCTCCTCTGCACTGGCGCTGGACTACGACACCATGGCG
CGCAGAGCTGCCCCTTTTCAGCCTGATTTTCTTCCGCTACACAAGCGCAT
TCAGGCCAGAATCGTGCGCTTGCGCCAGCTGCTCATGGAGGGCGATCGTA
TCGGAGACTTGCAGATGCTCAAGGATCTCGCCGAAATTCTGCAAGCCAAT
ATTGCCAGGCACCAAACGCAGGCCGAGTCCAAGCGCTCGCAGATAAAGCA
TGCGCAGATTGTTGCCGGCTTTGTCGACAGGAGAAACCATGTCATTCACA
TCAAGAAGGTGTCTGGCAAGCCCAGTACCTTTCGAAGCAGAACCACCAGT
GCTCTCAAGCTGCGCGCTGCCTCGATGCGCTCATCCTCTCGACATCCCCG
CAATGGCGCTGAGAACAAGCAACGCATCAGGCCTGAAATGAACCAAAGGC
GCTGTGATGACCTTGGCGCTCAGAAGGGCAAGTCTGACTTTAGTCGCCTC
ACGCGCAAAAGTTCGGCGCATTTGCGACGCTTGCATAGCGCTGGTGCCGT
GCTGATGAGGAAGCTCAGCAAGTCTCCTGCGCCCACCCATCATGCCGCTT
GCTCTCCGGACAGTGCGCCGTCGAGTACACCAGTGTTGGATCCCGAGACT
ATCAAAAAGCTCAAGACCGATCCTGCTCCAATTATAAATGACTTTCAAAT
GGAGTTGCAGGCGATTGAACAGGAAGGGCTATTGGACCGCGCCAAGCTGG
ACGAGGTCGAGTCTCAACTTGACCAACGTCGGCGAATACACGAGGAAGCC
ATGGATATTCTTGATCAATTTTACGGCGCTTTACCAGGCTGGGAGAACGA
CCCCATCTCACAAAAGATGATTTTGGAAACAGTGGAACTGACTGAAGCTG
GCGTGGATGCAGAACGTGATCTGACCGAGTCACGCGACGTGTTCCTTCGT
GCCGAAGCTGCGCTTGCTGATCATCAGCGTGCTCACCGAGCGTTGCAGGC
CATTCGCTCCGACCTTACCAGCTTCGTGCAGATTCTGAGTGACCTCATTG
CTTCCGCCGATGTGATTGTCGAGACGCGCGGTAGGGCGAACACCCCTACC
AGACAGCGACGATACTCGCTTGATGTGCAAACCGAAGCAGGTGAGGGTGT
TTTGGACACTTTTTCTCATCTTGAACGACTTCTTGATCGTTGTATTGGAC
AGTCTCGACTAGCTGTCGAGTGCTGCTGTGAGGCACCGCGTGTACAGAAT
CTACAGGACGATATGGAACAGATTTCTGCTGGATTTGCTCTTGAGGCGGA
CGCCGTTAAGAAGAATGGTACGATTTATCATGATGACCTTGAACCTACGC
TTCAGGTCTCGGTGACTGCGTTGGGGGATTGCAAATTGGCGGAAGGATTC
GTGTCCGAAAGACAAGACCTGATTTCTGAAGATCTAAAGCCGCTAAGGAA
TCAGCTGGAGCGAAGTGAGGAGTACGTGATGTTGGAACGCCTGGCAATTC
TGGATTTGCGGCACCCCCGAGATGATCGATGA
back to top

protein sequence of Ggra9903.t1

>Ggra9903.t1 ID=Ggra9903.t1|Name=Ggra9903.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=644bp
MMRFAFRARQRKDAVPPAPPDRHAEPPRKKTFAPRLAALNSFSKLGASAN
HSFVSIKPKPSATTPNTNVNNASAQNVIPNARQSSSPLSVLVNYDLHPTR
NHSGHALEYANYTPSRFFVAPTTRTHRRPRHATNASFFSSALALDYDTMA
RRAAPFQPDFLPLHKRIQARIVRLRQLLMEGDRIGDLQMLKDLAEILQAN
IARHQTQAESKRSQIKHAQIVAGFVDRRNHVIHIKKVSGKPSTFRSRTTS
ALKLRAASMRSSSRHPRNGAENKQRIRPEMNQRRCDDLGAQKGKSDFSRL
TRKSSAHLRRLHSAGAVLMRKLSKSPAPTHHAACSPDSAPSSTPVLDPET
IKKLKTDPAPIINDFQMELQAIEQEGLLDRAKLDEVESQLDQRRRIHEEA
MDILDQFYGALPGWENDPISQKMILETVELTEAGVDAERDLTESRDVFLR
AEAALADHQRAHRALQAIRSDLTSFVQILSDLIASADVIVETRGRANTPT
RQRRYSLDVQTEAGEGVLDTFSHLERLLDRCIGQSRLAVECCCEAPRVQN
LQDDMEQISAGFALEADAVKKNGTIYHDDLEPTLQVSVTALGDCKLAEGF
VSERQDLISEDLKPLRNQLERSEEYVMLERLAILDLRHPRDDR*
back to top

mRNA from alignment at tig00000887_pilon:50518..52449-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9903.t1 ID=Ggra9903.t1|Name=Ggra9903.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1932bp|location=Sequence derived from alignment at tig00000887_pilon:50518..52449- (Gracilaria gracilis GNS1m male)
ATGATGCGATTCGCGTTTCGCGCTCGCCAGCGCAAGGACGCTGTGCCGCC
CGCACCGCCCGACCGCCACGCAGAGCCACCCAGGAAGAAGACCTTTGCCC
CACGTCTCGCCGCCCTCAACTCCTTTTCCAAGCTGGGCGCTTCCGCCAAT
CATTCCTTCGTCTCCATCAAGCCCAAGCCCTCAGCCACCACCCCCAACAC
CAACGTCAACAACGCCTCGGCTCAAAATGTCATCCCCAACGCTCGCCAGT
CCTCGTCCCCGCTGTCTGTCCTCGTCAACTACGACCTGCATCCCACTCGA
AACCACTCTGGTCACGCTCTAGAGTACGCCAACTACACTCCGTCCCGGTT
CTTTGTTGCTCCAACCACCCGCACTCATCGCCGACCCCGTCATGCTACCA
ACGCCTCGTTTTTCTCCTCTGCACTGGCGCTGGACTACGACACCATGGCG
CGCAGAGCTGCCCCTTTTCAGCCTGATTTTCTTCCGCTACACAAGCGCAT
TCAGGCCAGAATCGTGCGCTTGCGCCAGCTGCTCATGGAGGGCGATCGTA
TCGGAGACTTGCAGATGCTCAAGGATCTCGCCGAAATTCTGCAAGCCAAT
ATTGCCAGGCACCAAACGCAGGCCGAGTCCAAGCGCTCGCAGATAAAGCA
TGCGCAGATTGTTGCCGGCTTTGTCGACAGGAGAAACCATGTCATTCACA
TCAAGAAGGTGTCTGGCAAGCCCAGTACCTTTCGAAGCAGAACCACCAGT
GCTCTCAAGCTGCGCGCTGCCTCGATGCGCTCATCCTCTCGACATCCCCG
CAATGGCGCTGAGAACAAGCAACGCATCAGGCCTGAAATGAACCAAAGGC
GCTGTGATGACCTTGGCGCTCAGAAGGGCAAGTCTGACTTTAGTCGCCTC
ACGCGCAAAAGTTCGGCGCATTTGCGACGCTTGCATAGCGCTGGTGCCGT
GCTGATGAGGAAGCTCAGCAAGTCTCCTGCGCCCACCCATCATGCCGCTT
GCTCTCCGGACAGTGCGCCGTCGAGTACACCAGTGTTGGATCCCGAGACT
ATCAAAAAGCTCAAGACCGATCCTGCTCCAATTATAAATGACTTTCAAAT
GGAGTTGCAGGCGATTGAACAGGAAGGGCTATTGGACCGCGCCAAGCTGG
ACGAGGTCGAGTCTCAACTTGACCAACGTCGGCGAATACACGAGGAAGCC
ATGGATATTCTTGATCAATTTTACGGCGCTTTACCAGGCTGGGAGAACGA
CCCCATCTCACAAAAGATGATTTTGGAAACAGTGGAACTGACTGAAGCTG
GCGTGGATGCAGAACGTGATCTGACCGAGTCACGCGACGTGTTCCTTCGT
GCCGAAGCTGCGCTTGCTGATCATCAGCGTGCTCACCGAGCGTTGCAGGC
CATTCGCTCCGACCTTACCAGCTTCGTGCAGATTCTGAGTGACCTCATTG
CTTCCGCCGATGTGATTGTCGAGACGCGCGGTAGGGCGAACACCCCTACC
AGACAGCGACGATACTCGCTTGATGTGCAAACCGAAGCAGGTGAGGGTGT
TTTGGACACTTTTTCTCATCTTGAACGACTTCTTGATCGTTGTATTGGAC
AGTCTCGACTAGCTGTCGAGTGCTGCTGTGAGGCACCGCGTGTACAGAAT
CTACAGGACGATATGGAACAGATTTCTGCTGGATTTGCTCTTGAGGCGGA
CGCCGTTAAGAAGAATGGTACGATTTATCATGATGACCTTGAACCTACGC
TTCAGGTCTCGGTGACTGCGTTGGGGGATTGCAAATTGGCGGAAGGATTC
GTGTCCGAAAGACAAGACCTGATTTCTGAAGATCTAAAGCCGCTAAGGAA
TCAGCTGGAGCGAAGTGAGGAGTACGTGATGTTGGAACGCCTGGCAATTC
TGGATTTGCGGCACCCCCGAGATGATCGATGA
back to top

Coding sequence (CDS) from alignment at tig00000887_pilon:50518..52449-

>Ggra9903.t1 ID=Ggra9903.t1|Name=Ggra9903.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1932bp|location=Sequence derived from alignment at tig00000887_pilon:50518..52449- (Gracilaria gracilis GNS1m male)
ATGATGCGATTCGCGTTTCGCGCTCGCCAGCGCAAGGACGCTGTGCCGCC
CGCACCGCCCGACCGCCACGCAGAGCCACCCAGGAAGAAGACCTTTGCCC
CACGTCTCGCCGCCCTCAACTCCTTTTCCAAGCTGGGCGCTTCCGCCAAT
CATTCCTTCGTCTCCATCAAGCCCAAGCCCTCAGCCACCACCCCCAACAC
CAACGTCAACAACGCCTCGGCTCAAAATGTCATCCCCAACGCTCGCCAGT
CCTCGTCCCCGCTGTCTGTCCTCGTCAACTACGACCTGCATCCCACTCGA
AACCACTCTGGTCACGCTCTAGAGTACGCCAACTACACTCCGTCCCGGTT
CTTTGTTGCTCCAACCACCCGCACTCATCGCCGACCCCGTCATGCTACCA
ACGCCTCGTTTTTCTCCTCTGCACTGGCGCTGGACTACGACACCATGGCG
CGCAGAGCTGCCCCTTTTCAGCCTGATTTTCTTCCGCTACACAAGCGCAT
TCAGGCCAGAATCGTGCGCTTGCGCCAGCTGCTCATGGAGGGCGATCGTA
TCGGAGACTTGCAGATGCTCAAGGATCTCGCCGAAATTCTGCAAGCCAAT
ATTGCCAGGCACCAAACGCAGGCCGAGTCCAAGCGCTCGCAGATAAAGCA
TGCGCAGATTGTTGCCGGCTTTGTCGACAGGAGAAACCATGTCATTCACA
TCAAGAAGGTGTCTGGCAAGCCCAGTACCTTTCGAAGCAGAACCACCAGT
GCTCTCAAGCTGCGCGCTGCCTCGATGCGCTCATCCTCTCGACATCCCCG
CAATGGCGCTGAGAACAAGCAACGCATCAGGCCTGAAATGAACCAAAGGC
GCTGTGATGACCTTGGCGCTCAGAAGGGCAAGTCTGACTTTAGTCGCCTC
ACGCGCAAAAGTTCGGCGCATTTGCGACGCTTGCATAGCGCTGGTGCCGT
GCTGATGAGGAAGCTCAGCAAGTCTCCTGCGCCCACCCATCATGCCGCTT
GCTCTCCGGACAGTGCGCCGTCGAGTACACCAGTGTTGGATCCCGAGACT
ATCAAAAAGCTCAAGACCGATCCTGCTCCAATTATAAATGACTTTCAAAT
GGAGTTGCAGGCGATTGAACAGGAAGGGCTATTGGACCGCGCCAAGCTGG
ACGAGGTCGAGTCTCAACTTGACCAACGTCGGCGAATACACGAGGAAGCC
ATGGATATTCTTGATCAATTTTACGGCGCTTTACCAGGCTGGGAGAACGA
CCCCATCTCACAAAAGATGATTTTGGAAACAGTGGAACTGACTGAAGCTG
GCGTGGATGCAGAACGTGATCTGACCGAGTCACGCGACGTGTTCCTTCGT
GCCGAAGCTGCGCTTGCTGATCATCAGCGTGCTCACCGAGCGTTGCAGGC
CATTCGCTCCGACCTTACCAGCTTCGTGCAGATTCTGAGTGACCTCATTG
CTTCCGCCGATGTGATTGTCGAGACGCGCGGTAGGGCGAACACCCCTACC
AGACAGCGACGATACTCGCTTGATGTGCAAACCGAAGCAGGTGAGGGTGT
TTTGGACACTTTTTCTCATCTTGAACGACTTCTTGATCGTTGTATTGGAC
AGTCTCGACTAGCTGTCGAGTGCTGCTGTGAGGCACCGCGTGTACAGAAT
CTACAGGACGATATGGAACAGATTTCTGCTGGATTTGCTCTTGAGGCGGA
CGCCGTTAAGAAGAATGGTACGATTTATCATGATGACCTTGAACCTACGC
TTCAGGTCTCGGTGACTGCGTTGGGGGATTGCAAATTGGCGGAAGGATTC
GTGTCCGAAAGACAAGACCTGATTTCTGAAGATCTAAAGCCGCTAAGGAA
TCAGCTGGAGCGAAGTGAGGAGTACGTGATGTTGGAACGCCTGGCAATTC
TGGATTTGCGGCACCCCCGAGATGATCGATGA
back to top