Ggra9374.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9374.t1
Unique NameGgra9374.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length255
Homology
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A2V3IVC9 (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVC9_9FLOR)

HSP 1 Score: 435 bits (1119), Expect = 8.530e-153
Identity = 208/254 (81.89%), Postives = 234/254 (92.13%), Query Frame = 0
Query:    1 MSGLRLTAAVPPRARDESVRASATGAPITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSGARKTDVSTW 254
            MSGLRLTA VP + RD+SV ASA GAP+ HTSRPIVTGSSVIA++CKDGVV+ATDTLASYGSLARFRQISRL++ATD CVIGGGGDMSDF E+C+ VRKETT+EYC+DDGHMI+ASA+HQMLARIMYNRRNKMDP WNY++VAGWQ GKP+LGYVDLVGSHF S+VIATGYGEYLGLPLLRKA+R+DITVEEGKKVL  IL VLFYRDARTIDR+QIACVTEKG  + +P KLETEWS+KAF+SGAR +DVSTW
Sbjct:   26 MSGLRLTAGVPLKDRDDSVLASAAGAPVKHTSRPIVTGSSVIAMRCKDGVVMATDTLASYGSLARFRQISRLYKATDHCVIGGGGDMSDFFELCETVRKETTLEYCYDDGHMITASAIHQMLARIMYNRRNKMDPYWNYMLVAGWQHGKPVLGYVDLVGSHFVSEVIATGYGEYLGLPLLRKAYREDITVEEGKKVLQQILTVLFYRDARTIDRIQIACVTEKGVEISEPTKLETEWSYKAFISGARASDVSTW 279          
BLAST of Ggra9374.t1 vs. uniprot
Match: R7QJL5 (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJL5_CHOCR)

HSP 1 Score: 354 bits (909), Expect = 1.630e-120
Identity = 173/260 (66.54%), Postives = 212/260 (81.54%), Query Frame = 0
Query:    1 MSGLRLTAAVPPRARDESVRASATGAPITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDG------KPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSGARKTDVSTW 254
            MSG +LT+      RD +V++SA+G PI HT RP+VTGSSVIA++C DGVVI  DTLASYGS+ARFR+ISRL +ATD CV+G GGD+SDF ++  MV KET  +YC +DGH +S  A+HQ +AR+MYNRRNKMDPLWNY+V+AG Q+G      KP+LG VDLVG+HF+S+VIATG+GEYLGLPLLRKA+R+DITV EGKKV+  I+KVLFYRDARTIDRVQIA VT+ G  + +P KLETEWS+KAFV GAR  D+STW
Sbjct:   41 MSGFKLTSGSGRFERDANVQSSASGEPIRHTQRPMVTGSSVIAMRCVDGVVIGADTLASYGSMARFRKISRLHKATDMCVVGAGGDLSDFQQLTTMVDKETNRDYCFNDGHGLSPKAIHQYVARVMYNRRNKMDPLWNYVVIAGMQNGDDGEEAKPVLGLVDLVGTHFESEVIATGFGEYLGLPLLRKAYREDITVAEGKKVVEQIMKVLFYRDARTIDRVQIATVTKDGVDMGEPFKLETEWSYKAFVDGARAGDMSTW 300          
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A5J4YTH8 (Proteasome subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTH8_PORPP)

HSP 1 Score: 282 bits (721), Expect = 9.190e-93
Identity = 133/228 (58.33%), Postives = 174/228 (76.32%), Query Frame = 0
Query:   27 PITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSGARKTDVSTW 254
            P+  T  P V GSSV+ +KC DGVVI++DTLASYGS+A+FR+ISR+ + +D+CVIG GG+ SDF EI   +      ++C DDG++++ SA+HQ L R+MY RRNKMDPLWN +V+AG+ DGK  LG VD VGS+F+S+VIATGYG Y+GLPLLR A+R DITV E KK+L DI++VLFYRDART + +QIA VT+ G  + +   LET+W ++ FV GAR  DVSTW
Sbjct:   18 PVKVTQTPYVVGSSVLGVKCIDGVVISSDTLASYGSMAKFRKISRIHKVSDACVIGAGGEFSDFQEIKKTMDGVMIEQFCMDDGYVLTPSAIHQYLVRVMYGRRNKMDPLWNQVVMAGFHDGKATLGMVDQVGSNFESEVIATGYGLYMGLPLLRNAYRPDITVAEAKKLLEDIMRVLFYRDARTSNSIQIAAVTKDGVEISEFYDLETKWDYQRFVDGARSGDVSTW 245          
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A1X6NJT9 (Proteasome subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJT9_PORUM)

HSP 1 Score: 275 bits (702), Expect = 8.320e-90
Identity = 141/254 (55.51%), Postives = 180/254 (70.87%), Query Frame = 0
Query:    1 MSGLRLTAAVPPRARDESVRASATGAPITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSGARKTDVSTW 254
            MSGLRLT      +R  +   +  GAP+T T  P VTGSSV+ +KC DGVVIA DT+ASYG+LARF+ +SR+ Q + +C++G GGD SDF ++  MV  E T +Y  +DG  +S  A+H  LAR MY+RR K+DPLWN ++VAG+  G+ +L  VDL G+ F SDV+ATG+G +LGLPLLR AHR DITV E K VL DILKVLFYRDART D VQ+A VT  G  + +  KL+TEW +K+FV GAR  D S+W
Sbjct:    1 MSGLRLTEG----SRGLAASVAVEGAPLTRTQVPYVTGSSVLGMKCADGVVIACDTMASYGTLARFKSLSRMHQVSPNCILGVGGDYSDFQQLQTMVDAEMTAQYVANDGLTLSPKAIHSFLARHMYHRRCKVDPLWNTVIVAGFDKGEGVLSLVDLFGTAFSSDVLATGFGLHLGLPLLRNAHRPDITVAEAKGVLEDILKVLFYRDARTNDVVQLASVTAAGVEIGKMTKLKTEWGYKSFVEGARVGDDSSW 250          
BLAST of Ggra9374.t1 vs. uniprot
Match: M2W1N9 (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1N9_GALSU)

HSP 1 Score: 265 bits (678), Expect = 2.140e-86
Identity = 120/228 (52.63%), Postives = 168/228 (73.68%), Query Frame = 0
Query:   27 PITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSGARKTDVSTW 254
            P+ HT+ P+VTG SVI IKC DGVVIA DTLASYGSLARF+  SRL + TDSC++GGGG++SDF EI  ++   TT ++C +D H  S  ++HQ L R++Y +R++++P WN L+V G+   +  LG VDL G+ F+S+V+A+G+G  LGLPLLRKA+R D+TV+EG K++ ++ +VLFYRDAR+I+R+Q+A  T  G  + +P  LET+W FK FV+     D STW
Sbjct:    7 PVRHTTSPLVTGGSVIGIKCSDGVVIAADTLASYGSLARFQNFSRLLKVTDSCLLGGGGEISDFQEIQRLLENLTTQDFCFNDEHKKSPRSLHQYLGRVLYAQRSRLNPFWNSLIVGGYVQSQSFLGMVDLYGTTFESEVLASGFGVLLGLPLLRKAYRPDLTVQEGIKIVEEVYRVLFYRDARSINRIQVATATVDGVTISEPYSLETKWDFKGFVNPRSTYDESTW 234          
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A7S1T8K4 (Proteasome subunit beta n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T8K4_9RHOD)

HSP 1 Score: 261 bits (667), Expect = 9.050e-85
Identity = 119/225 (52.89%), Postives = 161/225 (71.56%), Query Frame = 0
Query:   30 HTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSGARKTDVSTW 254
             T  P+VTGSSVI ++C DGVV+A DTL SYGSLARF+ +SR  + +   VIG GG+ SDF  +  ++  + T E+CHDDG  +   +++ M A+ M+  R ++DP WNY+V+ G   GKP LG VDL G++F+S+VIATG+G Y+GLPLLRKA+R+DITV E  KVL D+++VLFYRDAR+ +R+QI  VT +G  +  P KL+T W FK FV G+R  D STW
Sbjct:    7 RTQMPMVTGSSVIGMRCVDGVVMAADTLLSYGSLARFKDVSRFCKLSKDTVIGVGGEYSDFQSLSQILAAQMTHEFCHDDGSTLGPRSIYHMTAKFMFRHRLEVDPYWNYIVLGGMDQGKPFLGMVDLYGTNFESEVIATGFGIYMGLPLLRKAYREDITVLEATKVLTDVMRVLFYRDARSSERIQITTVTAEGVTISPPTKLDTHWEFKRFVQGSRANDDSTW 231          
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A7S2RSS8 (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSS8_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.280e-74
Identity = 109/222 (49.10%), Postives = 159/222 (71.62%), Query Frame = 0
Query:   21 ASATGAPITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAF 242
            A A  AP+ HT+RPIVTG+SVI IK KDGV++A DTLASYG+LA F+ + R+ + +DSC+IG GG+ SDF +I  ++ + T+ +   DDGH  S S +   L  +MY RRNKM+PLWN+++VAG+++GK  LG VDL+G+ F+ D +ATG+G YL +P+LRK  R D+   E + +L + L+VLFYRD R ++++++A  T +G+V+  P  LET WS  +F
Sbjct:   36 APAGAAPVQHTTRPIVTGTSVIGIKYKDGVMLAADTLASYGTLAMFKDVERIHKVSDSCLIGAGGEYSDFQKIQQVLDRLTSEDRNMDDGHQTSPSEIFHYLRAVMYQRRNKMNPLWNHVLVAGFKEGKSFLGSVDLIGTAFEDDFLATGFGSYLAIPILRKKWRPDLDEGEARALLEECLRVLFYRDCRALNKIRLAKATAEGSVISDPYTLETSWSAASF 257          
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A0G4J475 (Proteasome subunit beta n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J475_PLABS)

HSP 1 Score: 233 bits (593), Expect = 1.950e-73
Identity = 111/230 (48.26%), Postives = 159/230 (69.13%), Query Frame = 0
Query:   14 ARDESVRASATGAPITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFV 243
            A +  V   A   P THT  PIVTGSSV+ I  KDGV+I  DTL SYGS+ARFR + R+ + TD+ +IG GG+ SDF EI  +++  T  ++ +DDG+++ +S V   L R+MY++R+ ++P WN L+VAG++ GK LLGYVDL G+ ++  V ATG+G YLG+PLLRKA R  ++ EE +K+L D  +VL YRD RT+++ QIA VT  G  + +P  L+T+W ++ FV
Sbjct:    3 ASEFGVAGGAAQMPRTHTQSPIVTGSSVLGIVYKDGVMIMADTLGSYGSMARFRGLQRIRKITDTTLIGAGGEYSDFQEIMHILKDLTIRDWANDDGNILGSSEVFNYLTRVMYSKRSNVNPFWNQLLVAGFEQGKSLLGYVDLYGTSYKDVVAATGFGTYLGIPLLRKAWRQGLSAEEARKILEDAHRVLLYRDGRTLNKFQIAKVTADGVNISEPYSLKTDWEYRRFV 232          
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A165BTV9 (Proteasome subunit beta n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165BTV9_9APHY)

HSP 1 Score: 233 bits (595), Expect = 2.230e-73
Identity = 112/221 (50.68%), Postives = 155/221 (70.14%), Query Frame = 0
Query:   28 ITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKA---HRDDITVEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSG 245
            + HT +PIVTG+SV+AI+ KDG+++A D LASYGSLARFR I RL     S V+G  GDMSDF  I   + +    E+ + DGH +  + VH+ L+R+MY RR+KMDPLWN L+V G QDGKP L +VDL+G+ + +  IATGYG ++ +PLLR +   + D IT ++G+K+L D ++VL+YRDAR+ID+ Q+A VT  G  + +P KL TEWSF   + G
Sbjct:   39 VQHTQQPIVTGTSVLAIRYKDGIMMAADNLASYGSLARFRNIQRLHPVGSSTVVGASGDMSDFQYIQHTLDELMVEEFTYGDGHELGPAEVHEYLSRVMYGRRSKMDPLWNALLVGGIQDGKPYLAFVDLLGTTYSAPSIATGYGAHIAIPLLRTSVDPNPDAITEDQGRKILDDCMRVLYYRDARSIDKYQVATVTSAGVSISEPQKLTTEWSFAEQIRG 259          
BLAST of Ggra9374.t1 vs. uniprot
Match: A0A7S1KSF0 (Proteasome subunit beta n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KSF0_9EUKA)

HSP 1 Score: 233 bits (593), Expect = 3.160e-73
Identity = 109/222 (49.10%), Postives = 155/222 (69.82%), Query Frame = 0
Query:   27 PITHTSRPIVTGSSVIAIKCKDGVVIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKETTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDG--KPLLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKA--HRDDIT--VEEGKKVLLDILKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAF 242
            P THT +P +TG+SV+AIKC DG+V+ATDTL S+GSLARFR I R+ +  +  + GG GD +DF +IC  + + +  E+  DD  + +   +HQ L R+MY RRNK DPLWN L+V GW+     P LGYVDL+G++++SD IATGYG Y+  P+LRK    R  +T  V+E ++VL+D ++VL YRDART D++QI+ V   G  +E+P+ +ET+W +K F
Sbjct:   27 PTTHTQQPTLTGTSVLAIKCIDGIVMATDTLTSWGSLARFRSIQRVTKVNNDTICGGSGDYADFQQICQTLDELSEHEHSRDDDKLRTPKEIHQYLTRVMYERRNKFDPLWNALIVGGWRSKYEAPFLGYVDLIGTNYESDSIATGYGAYIAQPILRKFIDERGGVTYTVKEAREVLIDAMRVLVYRDARTSDKIQISTVDRDGVTIEEPMIIETKWLYKGF 248          
The following BLAST results are available for this feature:
BLAST of Ggra9374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVC98.530e-15381.89Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
R7QJL51.630e-12066.54Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
A0A5J4YTH89.190e-9358.33Proteasome subunit beta n=1 Tax=Porphyridium purpu... [more]
A0A1X6NJT98.320e-9055.51Proteasome subunit beta n=1 Tax=Porphyra umbilical... [more]
M2W1N92.140e-8652.63Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]
A0A7S1T8K49.050e-8552.89Proteasome subunit beta n=1 Tax=Compsopogon caerul... [more]
A0A7S2RSS82.280e-7449.10Proteasome subunit beta n=1 Tax=Rhizochromulina ma... [more]
A0A0G4J4751.950e-7348.26Proteasome subunit beta n=1 Tax=Plasmodiophora bra... [more]
A0A165BTV92.230e-7350.68Proteasome subunit beta n=1 Tax=Laetiporus sulphur... [more]
A0A7S1KSF03.160e-7349.10Proteasome subunit beta n=1 Tax=Percolomonas cosmo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 35..250
e-value: 1.2E-62
score: 213.2
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 33..240
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 36..219
e-value: 1.3E-31
score: 109.6
IPR016295Proteasome subunit beta 4PIRSFPIRSF001213MCPcoord: 10..251
e-value: 8.2E-81
score: 268.8
IPR016295Proteasome subunit beta 4PANTHERPTHR11599:SF5PROTEASOME SUBUNIT BETA TYPE-4coord: 23..231
IPR016295Proteasome subunit beta 4CDDcd03760proteasome_beta_type_4coord: 37..230
e-value: 1.15849E-96
score: 279.455
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 23..231
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 42..89
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 38..220
score: 31.18494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:119527..120291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9374.t1Ggra9374.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 119527..120291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9374.t1 ID=Ggra9374.t1|Name=Ggra9374.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=255bp
MSGLRLTAAVPPRARDESVRASATGAPITHTSRPIVTGSSVIAIKCKDGV
VIATDTLASYGSLARFRQISRLFQATDSCVIGGGGDMSDFHEICDMVRKE
TTMEYCHDDGHMISASAVHQMLARIMYNRRNKMDPLWNYLVVAGWQDGKP
LLGYVDLVGSHFQSDVIATGYGEYLGLPLLRKAHRDDITVEEGKKVLLDI
LKVLFYRDARTIDRVQIACVTEKGAVVEQPVKLETEWSFKAFVSGARKTD
VSTW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR016295Proteasome_beta4
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type