Ggra9380.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9380.t1
Unique NameGgra9380.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length256
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:210584..211351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9380Ggra9380Gracilaria gracilis GNS1m malegenetig00000883_pilon 210584..211351 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9380.t1.stop1Ggra9380.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000883_pilon 210584..210586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9380.t1.CDS1Ggra9380.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000883_pilon 210584..211351 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9380.t1.exon1Ggra9380.t1.exon1Gracilaria gracilis GNS1m maleexontig00000883_pilon 210584..211351 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9380.t1.start1Ggra9380.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000883_pilon 211349..211351 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9380.t1Ggra9380.t1Gracilaria gracilis GNS1m malepolypeptidetig00000883_pilon 210584..211351 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9380.t1 ID=Ggra9380.t1|Name=Ggra9380.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=256bp
MYNGAERSNPQPKRRRGRQPRPSSLSSAVKVAVAQFAHHVGQPRVIEPAG
FRDFRGWLSYVGSHSAVSAWAPLVDAVLNDTNGDASAIEALKDDLVREIV
KRVVIPRASESSKLVSTNCGRQCARPPNGVTLMTILDRVFQDPAEWRTFI
DTMSQHSSHRSHAPSASSVPHAPMLSSPSLSSSSHHHHAASSSFSLPTSS
SLPLPHAAPHHHASSSSSSSSSRQARAPSTPLPSFQELEDSLRHTSGSRG
KRSRR*
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spliced messenger RNA

>Ggra9380.t1 ID=Ggra9380.t1|Name=Ggra9380.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=768bp|location=Sequence derived from alignment at tig00000883_pilon:210584..211351- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACAACGGAGCCGAACGCAGCAACCCGCAGCCCAAGCGGCGCCGCGG
CCGGCAGCCGCGGCCGTCGTCGCTGTCGTCCGCCGTCAAGGTGGCCGTGG
CGCAGTTCGCGCATCACGTGGGACAGCCGCGCGTCATCGAGCCAGCCGGC
TTCCGCGACTTTCGCGGCTGGCTGTCGTACGTGGGCAGTCATTCGGCCGT
CAGCGCGTGGGCGCCCTTGGTGGACGCCGTGCTCAACGACACCAACGGCG
ACGCGTCCGCCATCGAGGCGCTCAAGGACGACCTGGTGCGCGAGATTGTC
AAACGCGTCGTCATCCCGCGCGCCAGCGAGAGCTCCAAGCTGGTCAGCAC
CAACTGCGGCCGTCAATGCGCGCGTCCGCCCAACGGCGTCACGCTCATGA
CTATCCTCGACCGCGTGTTCCAAGATCCGGCCGAGTGGCGCACTTTCATC
GACACCATGTCGCAGCACTCTTCTCACCGCTCTCACGCGCCGTCGGCGTC
GTCGGTGCCGCACGCGCCCATGCTGTCGTCGCCGTCGTTGTCATCGTCGT
CGCATCATCACCACGCCGCGTCGTCGTCGTTCTCGCTGCCCACATCGTCG
TCGCTGCCGCTGCCGCACGCCGCGCCGCACCACCACGCGTCGTCGTCGTC
GTCGTCGTCGTCGTCGCGTCAGGCTCGCGCGCCTTCTACGCCGCTGCCGT
CGTTCCAGGAGCTGGAGGACTCACTCCGCCACACGTCCGGCTCGCGTGGC
AAACGCTCGCGACGTTGA
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protein sequence of Ggra9380.t1

>Ggra9380.t1 ID=Ggra9380.t1|Name=Ggra9380.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=256bp
MYNGAERSNPQPKRRRGRQPRPSSLSSAVKVAVAQFAHHVGQPRVIEPAG
FRDFRGWLSYVGSHSAVSAWAPLVDAVLNDTNGDASAIEALKDDLVREIV
KRVVIPRASESSKLVSTNCGRQCARPPNGVTLMTILDRVFQDPAEWRTFI
DTMSQHSSHRSHAPSASSVPHAPMLSSPSLSSSSHHHHAASSSFSLPTSS
SLPLPHAAPHHHASSSSSSSSSRQARAPSTPLPSFQELEDSLRHTSGSRG
KRSRR*
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mRNA from alignment at tig00000883_pilon:210584..211351-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9380.t1 ID=Ggra9380.t1|Name=Ggra9380.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=768bp|location=Sequence derived from alignment at tig00000883_pilon:210584..211351- (Gracilaria gracilis GNS1m male)
ATGTACAACGGAGCCGAACGCAGCAACCCGCAGCCCAAGCGGCGCCGCGG
CCGGCAGCCGCGGCCGTCGTCGCTGTCGTCCGCCGTCAAGGTGGCCGTGG
CGCAGTTCGCGCATCACGTGGGACAGCCGCGCGTCATCGAGCCAGCCGGC
TTCCGCGACTTTCGCGGCTGGCTGTCGTACGTGGGCAGTCATTCGGCCGT
CAGCGCGTGGGCGCCCTTGGTGGACGCCGTGCTCAACGACACCAACGGCG
ACGCGTCCGCCATCGAGGCGCTCAAGGACGACCTGGTGCGCGAGATTGTC
AAACGCGTCGTCATCCCGCGCGCCAGCGAGAGCTCCAAGCTGGTCAGCAC
CAACTGCGGCCGTCAATGCGCGCGTCCGCCCAACGGCGTCACGCTCATGA
CTATCCTCGACCGCGTGTTCCAAGATCCGGCCGAGTGGCGCACTTTCATC
GACACCATGTCGCAGCACTCTTCTCACCGCTCTCACGCGCCGTCGGCGTC
GTCGGTGCCGCACGCGCCCATGCTGTCGTCGCCGTCGTTGTCATCGTCGT
CGCATCATCACCACGCCGCGTCGTCGTCGTTCTCGCTGCCCACATCGTCG
TCGCTGCCGCTGCCGCACGCCGCGCCGCACCACCACGCGTCGTCGTCGTC
GTCGTCGTCGTCGTCGCGTCAGGCTCGCGCGCCTTCTACGCCGCTGCCGT
CGTTCCAGGAGCTGGAGGACTCACTCCGCCACACGTCCGGCTCGCGTGGC
AAACGCTCGCGACGTTGA
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Coding sequence (CDS) from alignment at tig00000883_pilon:210584..211351-

>Ggra9380.t1 ID=Ggra9380.t1|Name=Ggra9380.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=768bp|location=Sequence derived from alignment at tig00000883_pilon:210584..211351- (Gracilaria gracilis GNS1m male)
ATGTACAACGGAGCCGAACGCAGCAACCCGCAGCCCAAGCGGCGCCGCGG
CCGGCAGCCGCGGCCGTCGTCGCTGTCGTCCGCCGTCAAGGTGGCCGTGG
CGCAGTTCGCGCATCACGTGGGACAGCCGCGCGTCATCGAGCCAGCCGGC
TTCCGCGACTTTCGCGGCTGGCTGTCGTACGTGGGCAGTCATTCGGCCGT
CAGCGCGTGGGCGCCCTTGGTGGACGCCGTGCTCAACGACACCAACGGCG
ACGCGTCCGCCATCGAGGCGCTCAAGGACGACCTGGTGCGCGAGATTGTC
AAACGCGTCGTCATCCCGCGCGCCAGCGAGAGCTCCAAGCTGGTCAGCAC
CAACTGCGGCCGTCAATGCGCGCGTCCGCCCAACGGCGTCACGCTCATGA
CTATCCTCGACCGCGTGTTCCAAGATCCGGCCGAGTGGCGCACTTTCATC
GACACCATGTCGCAGCACTCTTCTCACCGCTCTCACGCGCCGTCGGCGTC
GTCGGTGCCGCACGCGCCCATGCTGTCGTCGCCGTCGTTGTCATCGTCGT
CGCATCATCACCACGCCGCGTCGTCGTCGTTCTCGCTGCCCACATCGTCG
TCGCTGCCGCTGCCGCACGCCGCGCCGCACCACCACGCGTCGTCGTCGTC
GTCGTCGTCGTCGTCGCGTCAGGCTCGCGCGCCTTCTACGCCGCTGCCGT
CGTTCCAGGAGCTGGAGGACTCACTCCGCCACACGTCCGGCTCGCGTGGC
AAACGCTCGCGACGTTGA
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