Ggra9342.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9342.t1
Unique NameGgra9342.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length117
Homology
[Close]
BLAST of Ggra9342.t1 vs. uniprot
Match: A0A2V3IV47 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV47_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 5.310e-27
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0 
Query:   18 LTAVSHKRGETETIFNDPSNENKAASADAVTRAVYTTVALCVVSGVLLLAWWYHGNKRVDRDRLF 82
            +  V  KRGETETIFNDP NENKAAS DAVTRA+YT+V LC+VS  LL+AWWY+G KR+DRDRLF
Sbjct:   26 INPVIRKRGETETIFNDPRNENKAASEDAVTRAIYTSVVLCIVSFALLVAWWYYGTKRIDRDRLF 90
The following BLAST results are available for this feature:
BLAST of Ggra9342.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IV475.310e-2773.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availableTMHMMTMhelixcoord: 50..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:36871..37221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9342.t1Ggra9342.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 36871..37221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9342.t1 ID=Ggra9342.t1|Name=Ggra9342.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=117bp
MIDRVLPPLLRLFQPPSLTAVSHKRGETETIFNDPSNENKAASADAVTRA
VYTTVALCVVSGVLLLAWWYHGNKRVDRDRLFRHDAWTAADEQAARSAAG
AAQIEATDGDDVTRSA*
back to top