Ggra994.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra994.t1
Unique NameGgra994.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1124
Homology
BLAST of Ggra994.t1 vs. uniprot
Match: A0A519DYJ8 (Ankyrin repeat domain-containing protein n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519DYJ8_9BURK)

HSP 1 Score: 63.5 bits (153), Expect = 3.550e-7
Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 0
Query:  674 APASATIMSHSQGEKLLQAARDGQPGTVRQLLSSGVNPDHRDADGSTALHIASENFKCPAIIDVLLLCKPRVDAKDNNNQTALMLAARRGKYFAVRKLVEHKAALDAQDVWQCNALDYAINERHTRIEQYLRSRGA 809
            APAS+     +   +L  AAR+    TV +LL +GV+P+ RDA G+TALH+A       A   +L      V A +   +T LMLAA +G+   V++LV+  A ++ +  W  +AL YA      ++ ++L + GA
Sbjct:   45 APASSAASETAAPPELHVAARNDHASTVMKLLLAGVDPNIRDAQGNTALHVAIREESGKAFDTLLKSPGTDVSAINQAGETPLMLAALKGQLDWVKELVKRGAFVN-EPGW--SALHYAAAGPSEQVVRWLVAEGA 177          
BLAST of Ggra994.t1 vs. uniprot
Match: A0A2G9CBK4 (Uncharacterized protein n=1 Tax=Mitsuaria sp. HWN-4 TaxID=2049333 RepID=A0A2G9CBK4_9BURK)

HSP 1 Score: 62.4 bits (150), Expect = 1.400e-6
Identity = 55/175 (31.43%), Postives = 86/175 (49.14%), Query Frame = 0
Query:  673 PAPASATIMSHSQGEKLLQAARDGQPGTVRQLLSSGVNPDHRDADGSTALHIASENFKCPAIIDVLLLCKPRVDAKDNNNQTALMLAARRGKYFAVRKLVEHKAALDAQDVWQCNALDYAINERHTRIEQYLRSRGAR-----PTGNTALPPVVEHRNLPEDMYLRMLDGTDVTI 842
            P  A+A+  +     +L  AAR+    TV +LL +G +P+ RDA  +TALH+A       A+  +L      V+A +   +T LMLAA +G     R+LV+ + AL  +  W  +AL YA    +  + ++L  +GA+     P G T L     +  L     L +  G DVT+
Sbjct:   88 PVAAAASAEAAVAPPELHVAARNDHAATVMKLLLAGTDPNVRDAQRNTALHVAIREDSGKAVEALLKSPGTDVNAINQAGETPLMLAAIKGNLDMARELVK-RGALVNEPGW--SALHYAAAGPNEHLVRWLIGQGAQIDARSPNGTTPLMMAAGYGGLSGAEVL-LAAGADVTL 258          
BLAST of Ggra994.t1 vs. uniprot
Match: A0A0C3CFX2 (Uncharacterized protein n=1 Tax=Piloderma croceum (strain F 1598) TaxID=765440 RepID=A0A0C3CFX2_PILCF)

HSP 1 Score: 63.9 bits (154), Expect = 1.450e-6
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  691 QAARDGQPGTVRQLLS-SGVNPDHRDADGSTALHIASENFKCPAIIDVLLLCKPRVDAKDNNNQTALMLAARRGKYFAVRKLVEH 774
            +A+  G P  +  LLS  GV  DHR+A G TALH+A++  +  A +DV L  K  V+ +D N  TAL  AA +G+Y  VR+LVEH
Sbjct:  437 KASAQGHPIILDYLLSREGVEVDHRNAAGVTALHMAAQWGEL-ACLDVCLDYKANVEVEDRNGWTALFCAAWKGRYACVRRLVEH 520          
BLAST of Ggra994.t1 vs. uniprot
Match: A0A5C7A9X1 (Ankyrin repeat domain-containing protein (Fragment) n=2 Tax=Mitsuaria sp. TWR114 TaxID=2601731 RepID=A0A5C7A9X1_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 2.720e-6
Identity = 57/194 (29.38%), Postives = 88/194 (45.36%), Query Frame = 0
Query:  692 AARDGQPGTVRQLLSSGVNPDHRDADGSTALHIASENFKCPAIIDVLLLCKPRVDAKDNNNQTALMLAARRGKYFAVRKLVEHKAALDAQDVWQCNALDYAINERHTRIEQYLRSRGA-----RPTGNTALPPVVEHRNLPEDMYLRMLDGTDVTITSTQLRYVTGNINNLRQYMCANYVVHMLKRSAHAAIEP 880
            AAR+    TV +LL +G +P+ RDA  +TALH+A       A+  +L      V+A +   +T LMLAA +G     R+LV+ + AL  +  W  +AL YA    +  + ++L  +GA      P G T L     +  L     L +  G DVT+ +              Q   A+ +  + +  A AA  P
Sbjct:    1 AARNDHAATVMKLLLAGTDPNVRDAQRNTALHVAIREESGKAVEALLKSPGTDVNAINQAGETPLMLAAIKGNLDIARELVK-RGALVNEPGW--SALHYAAAGPNEHLVRWLVGQGADIDARSPNGTTPLMMAAGYGGLSGAEIL-IAAGADVTLRNDHQLSAADFARRAGQDEMADKLDQLARARAKAAATP 190          
The following BLAST results are available for this feature:
BLAST of Ggra994.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A519DYJ83.550e-734.56Ankyrin repeat domain-containing protein n=1 Tax=R... [more]
A0A2G9CBK41.400e-631.43Uncharacterized protein n=1 Tax=Mitsuaria sp. HWN-... [more]
A0A0C3CFX21.450e-645.88Uncharacterized protein n=1 Tax=Piloderma croceum ... [more]
A0A5C7A9X12.720e-629.38Ankyrin repeat domain-containing protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 784..813
e-value: 3800.0
score: 0.7
coord: 751..780
e-value: 0.14
score: 21.2
coord: 717..747
e-value: 8.8
score: 15.3
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 689..782
e-value: 2.0E-11
score: 44.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 717..750
score: 8.76305
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 751..783
score: 9.430799
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 677..827
e-value: 3.2E-30
score: 106.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 688..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..439
NoneNo IPR availablePANTHERPTHR24134ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 683..812
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1056..1123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1027
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1028..1055

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:92182..97380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra994.t1Ggra994.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 92182..97380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra994.t1 ID=Ggra994.t1|Name=Ggra994.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1124bp
MGLAHLPPPPPRSPSSGRHTSPCSQSAWCVQKPHLPLRPTQRWYLEQRCG
SEHMMHASPLPPPCGSHHALCASTRAQRCVCRWQRRSPLQSLCLLQRSHS
CDFCDGDALGEPLADGLAERLDDGDDDGRGVLLTDGLGVRLDDGDGRGVL
LADGLGVRLDEGDGRGVLLTDGLGVRLDEGDGRGVLLTDGLGVRLDDGDG
RGVLLTDGLGVRLDDGDGRGVLLTDGLGVRLDDGDGRGVLLTDGLGVRLD
DGDGRGVLLTDGLGVRLDDGDGRGVLLTDGLGVRLDEGDGRGVLLVDGLA
ERLDEGDGLGVRLADGLAERLDEGDGLGVRLADGLAERLDEGDGLGVRLA
DGLGVRLDEGDGLGVELADGLAERLDDGDGLGVRLADGLGARLDDGDALG
RQLWLALGDGPGGLGLGGGRRRKRRLHEPRWHTSGRRHTQHGSPQRPPTP
MGAAHTPRTQRSARAQRRPPRPPQRWHFCAAARTQRSRTQRSARAQRGAQ
LLLRLLAAARAQPRAPSCNTRAQRPRTQRSPRAQRTRREQRAQPRARART
QRWLRHTSGGAQCVHERPHAPCSREMATQRPRSQRSPARQRVRREQRPQR
PGGGVRGAAGGGARGAAGGARGGVRGEVGGLRGWNGGLAPHRRAFSPPPP
CHVALCSIVCNQTSPPLSATRRPAPASATIMSHSQGEKLLQAARDGQPGT
VRQLLSSGVNPDHRDADGSTALHIASENFKCPAIIDVLLLCKPRVDAKDN
NNQTALMLAARRGKYFAVRKLVEHKAALDAQDVWQCNALDYAINERHTRI
EQYLRSRGARPTGNTALPPVVEHRNLPEDMYLRMLDGTDVTITSTQLRYV
TGNINNLRQYMCANYVVHMLKRSAHAAIEPLCDFDSHNRDYFLDLYYSAN
KFHISRREMRVVESMIDSAEDCALIRAGAGTHVKQSVRTNYMVRELKHGL
DKLTKDVFEVYGQLSVRVARVESVSGRFATQLTRLAANDKHFEQLVTDLL
HRTNELQAVRDAADSSDKFDKVVRVVRFFAAFIPVVGGPTAELVAISMEL
VFSYISDQRRMARVENARAIGVDPTDIGRVRAVTQYGFLRRLHRKARKAI
RLVARESKFGSIEELVRCLAGPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf