Ggra9344.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9344.t1
Unique NameGgra9344.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length480
Homology
BLAST of Ggra9344.t1 vs. uniprot
Match: A0A2V3IVA2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA2_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 1.350e-51
Identity = 110/219 (50.23%), Postives = 146/219 (66.67%), Query Frame = 0
Query:    2 VEIIDLLS-DTE--LTPRVRRSRPRPVLNDPELAIVSEHIRPLHRSPTQRTSPHPSTPPANALDQPSSSTAPGSSRRAVDDDSSPPEVVALRKGVNPLQDYAHPRFSCTREPFSAESAAKYCPKCFCFVCDIKADKCTAWSEHCGAIDDDAWRRKRRDVRKASRRYDRGVDRLAKDARRREKRARHEQERRLVLEALG-EDRDYAAVMAEQAEIVSQYH 216
            +E+IDL S DTE    PRVRR  P P+ +DPEL +VSE ++           P    PP N        + P  S+R     +  P+VV L+KG+ PL+DY H RF+CT++P+SA++A KYCPKCFCFVCD+ A  C  W  HC A+D++ W+ +RR+ RKASRRY+RGVD LAK+ARRREKR+R E+ERR VLEALG E   +  +MAEQ E VS+++
Sbjct:    1 MEVIDLTSSDTEPLRLPRVRR--PCPIPDDPELVLVSEKLK-------HAPKPREPAPPRNP-------STPTPSKRPRLKTTEAPQVVGLKKGIKPLEDYPHARFACTQQPYSAQNARKYCPKCFCFVCDVLASTCQEWERHCNAVDNEEWKMERREKRKASRRYERGVDLLAKEARRREKRSRKEKERREVLEALGGEILTFEQLMAEQMEAVSEFY 203          
BLAST of Ggra9344.t1 vs. uniprot
Match: A0A1E7EMK9 (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EMK9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.480e-7
Identity = 35/81 (43.21%), Postives = 44/81 (54.32%), Query Frame = 0
Query:   92 GVNPLQDYAHPRFSCTREPFSAESAAKYCPKCFCFVCDIKADKCTAWSEHCGAIDDDA-WRRKRRDVRKASRRYDRGVDRL 171
            G N L D+AH R  C   PFS +    YCPKC+C+VCDIKA  CT W  H  A   +  W + R  VR   +  +R + RL
Sbjct:  724 GSNALADFAHCREDCITNPFSKDPKV-YCPKCYCYVCDIKASDCTKWDSHFQAKRSEIKWTKHRSKVRNKRKAPEREMQRL 803          
BLAST of Ggra9344.t1 vs. uniprot
Match: A0A448ZBD0 (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBD0_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.130e-7
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   79 DDSSPPEVVALRKGVNPLQDYAHPRFSCTREPFSAESAAKYCPKCFCFVCDIKADKCTAWSE----HCGAIDDD 148
            DD    E++  R+G NPL D+ H R  C +  F AE+  ++CPKCFC++CD+ A  C  W+     HC A   D
Sbjct:   89 DDDDILEILETRRGNNPLLDFPHRREDCLKFAF-AENPCRFCPKCFCYICDVPASACPEWTRGKEPHCSARHGD 161          
The following BLAST results are available for this feature:
BLAST of Ggra9344.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IVA21.350e-5150.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1E7EMK92.480e-743.21Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448ZBD04.130e-740.54Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..242
NoneNo IPR availablePANTHERPTHR33443:SF9SUBFAMILY NOT NAMEDcoord: 74..236
NoneNo IPR availablePANTHERPTHR33443ZGC:112980coord: 74..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:38395..39834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9344.t1Ggra9344.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 38395..39834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9344.t1 ID=Ggra9344.t1|Name=Ggra9344.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=480bp
MVEIIDLLSDTELTPRVRRSRPRPVLNDPELAIVSEHIRPLHRSPTQRTS
PHPSTPPANALDQPSSSTAPGSSRRAVDDDSSPPEVVALRKGVNPLQDYA
HPRFSCTREPFSAESAAKYCPKCFCFVCDIKADKCTAWSEHCGAIDDDAW
RRKRRDVRKASRRYDRGVDRLAKDARRREKRARHEQERRLVLEALGEDRD
YAAVMAEQAEIVSQYHTAVGTHASPNPLSTANHSSASPPFALAAAQQRLQ
ALRQTAPAHRGLRSILPFRPPIGVSERCAPLPTSLMRTPSNRLHASHAAN
PAAGAAPSISAHPSVALLGSPARTDTDENSEDSDVVREPPNPLDTNHLPK
NPILSPLQLEQVLAMQSSLFRGQFGGTEPTSREKTEITPDEEAPTARNIS
RRRNVLDNSDAGKASRPSFGIRYGDRRPPFVEETVNDRSRSKKRRRGRTE
DRGSRRDRSSSGPPSRLRKVARSRRSGPH*
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