Ggra9351.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9351.t1
Unique NameGgra9351.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length265
Homology
The following BLAST results are available for this feature:
BLAST of Ggra9351.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 215..240
e-value: 1.3
score: 18.0
coord: 155..178
e-value: 0.021
score: 24.0
coord: 126..149
e-value: 7.8
score: 14.3
coord: 184..209
e-value: 0.0024
score: 27.1
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 155..178
e-value: 0.0069
score: 16.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 157..178
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 217..240
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 186..209
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 128..149
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 215..245
score: 9.930481
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 184..214
score: 10.969637
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 155..183
score: 10.844938
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 126..154
score: 11.1359
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 180..212
e-value: 5.1E-6
score: 28.1
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 213..241
e-value: 7.2E-7
score: 31.2
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 124..153
e-value: 2.6E-5
score: 26.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 154..179
e-value: 3.0E-7
score: 32.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..66
NoneNo IPR availablePANTHERPTHR24393ZINC FINGER PROTEINcoord: 101..240
NoneNo IPR availablePANTHERPTHR24393:SF103ZINC FINGER PROTEIN 410coord: 101..240
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 213..240
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 125..175
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 163..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:57893..58833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9351.t1Ggra9351.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 57893..58833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9351.t1 ID=Ggra9351.t1|Name=Ggra9351.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=265bp
MQPLGSMDISSILNNAKLVNTGENSVLGGPHYDSLRKTPLSPFSSVSGWN
RNNSSSNSTSPSLADFTASEVREEGTQPMQPWVPTFSAPKSCSQTRVRVG
VCRPKRRSLEVSSNNVQRLEGFSKRRKCESCMKTFYSSTHLDIHEETVHK
GIKRHKCSHCSSSFGQSGTLTRHILTVHEKRRDHECKLPNCRKRFSSAWS
LKVHVQNVHFKLRPYGCSVPSCSRAFGNLWNRRKHERNVHGIQRDSPSAT
INNVSANRQGGINS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf