Ggra9367.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9367.t1
Unique NameGgra9367.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length343
Homology
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A2V3IV97 (Chromoplast-specific carotenoid-associated protein C1, chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV97_9FLOR)

HSP 1 Score: 406 bits (1044), Expect = 6.080e-140
Identity = 205/267 (76.78%), Postives = 237/267 (88.76%), Query Frame = 0
Query:   77 STLVRLPTNPSLSSFTSRTAPTRHAVPRRARPLNLRMEV-GDEAEDEAPSDVSVPAGDAVKSMIPGMDDAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTRLD 342
            S+ +RL       SFT         V RRARPLN+RME+ G+EAEDEAPSDV+VP GDAVK+MIPGMD+AKRTALV+KLLQYAAITDRG SA++ Q +AVDDIVM+LEE+NPNPQPVE +LIDGEWNLVYT AKLFQTNPFLMAA TPLLQVGQ+RQ+I+VD+GKL+TE EV AFPVTSWTVKT+ RITPVGAERLE+TVE+T++TGGKIADRIDLGGISF+VPVEQI+SRIRNA+PE+Y+DTYYLDE LRISRSK+GKL+IYTRLD
Sbjct:   10 SSFLRLTPGTQQCSFTCTKRAATPNVARRARPLNIRMELEGEEAEDEAPSDVAVPVGDAVKTMIPGMDEAKRTALVAKLLQYAAITDRGQSATDAQVSAVDDIVMSLEEVNPNPQPVEIDLIDGEWNLVYTAAKLFQTNPFLMAAATPLLQVGQVRQRISVDEGKLSTEVEVIAFPVTSWTVKTTGRITPVGAERLEVTVETTNITGGKIADRIDLGGISFDVPVEQIYSRIRNASPETYVDTYYLDETLRISRSKEGKLYIYTRLD 276          
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A7S2ZS90 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZS90_9RHOD)

HSP 1 Score: 223 bits (568), Expect = 5.220e-68
Identity = 105/233 (45.06%), Postives = 160/233 (68.67%), Query Frame = 0
Query:  109 LNLRMEVGDEAEDEAPSDVSVPAGDAVKSMIPGMDDAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTRL 341
            LN+ M   DEAEDEAPSD +VP    + + + G+  + R+ L ++LL+ +A+T+RG +AS  Q++ ++DIV +LE  NPNP PVET+ IDG WNL+Y++   ++ NP L    +P L+VGQ+RQ I+++  +L  E E+TAFP+ +  V  + RITPVGAERLE  +E   + GG   +R DLG +  ++PVE+I+ R+R   PE+++DTYYLD+ +RISR K   LF++ ++
Sbjct:   37 LNMSM---DEAEDEAPSDTAVPTSADIDNSV-GVSQS-RSDLTTQLLEISAVTNRGQTASAEQKSLIEDIVASLEADNPNPAPVETDAIDGRWNLIYSSTPFYKVNPLLATTASPFLEVGQVRQTISMETSELINEIEITAFPMLTGAVVANGRITPVGAERLEFALEKVSIKGGSAFERFDLGALKLDIPVEEIYQRVRGTLPETFVDTYYLDDKIRISRGKGSTLFLFAKM 264          
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A7S0G8T1 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G8T1_9RHOD)

HSP 1 Score: 221 bits (564), Expect = 5.870e-68
Identity = 102/225 (45.33%), Postives = 157/225 (69.78%), Query Frame = 0
Query:  117 DEAEDEAPSDVSVPAGDAVKSMIPGMDDAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTRL 341
            DEAEDEAPSD +VP    V + + G+  + R+ L ++LL+  A+T+RG +AS  Q++ ++DIV  LE  NPNP PVET+ IDG WNL+Y +   ++ NP L    +P ++VGQ+RQ I+++ G+L  E ++TAFP+ + T+ T+ R+TPVGAERLE+ +E   + GG   +R DLG +  ++PVE+I+ R+R   PE++IDTYYLD+ +RISR +   LF++ ++
Sbjct:    2 DEAEDEAPSDTAVPTSADVDNSV-GVKQS-RSDLTTQLLEICAVTNRGQTASAEQKSLIEDIVALLEADNPNPAPVETDAIDGRWNLIYLSTPFYKANPLLATTASPFIEVGQVRQTISMETGELINEIDITAFPMLAGTLVTNLRLTPVGAERLEVALEKATIKGGSAFERFDLGALKLDIPVEEIYQRVRGTVPETFIDTYYLDDRIRISRGRGSNLFLFAKM 224          
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A1X6P059 (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM)

HSP 1 Score: 215 bits (547), Expect = 1.060e-63
Identity = 103/204 (50.49%), Postives = 146/204 (71.57%), Query Frame = 0
Query:  140 PGMD-DAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAA-PESYIDTYYLDENLRISRSKQGKLFIYTRL 341
            P  D DA RT +  KLL+ AA TDRG  A+  Q+ AV+D+V  LE  NP   PV+T LIDG W LVY +  LF+T P L+AA TPLL VGQ++Q + VD G+L  + EVTAFP+ + TV T++R+TP+  ERLE+ VE T V G  +A ++DLGG+  ++PVEQ++ +++N A PE+++DT+YLDE +RISR K G +++YT++
Sbjct:  151 PSFDADASRTEMKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLEAANPTDSPVDTALIDGTWLLVYASKPLFKTTPLLLAAATPLLVVGQVKQMLRVDSGELVNDVEVTAFPMITGTVSTTARVTPITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTKM 354          
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A5J4Z5Z5 (Light-induced protein, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Z5_PORPP)

HSP 1 Score: 194 bits (492), Expect = 8.160e-55
Identity = 96/217 (44.24%), Postives = 141/217 (64.98%), Query Frame = 0
Query:  124 PSDVSVPAGDAVKSMIPGMDDAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTR 340
            P D  + AG+   S    +  A    L ++L+  AA ++RG SAS  QR  ++ +   LEELNPNP PV+  +IDG W+L+Y++ +L++T+PFL+ A TPL+QVG +RQ I VD G+   E  VT+FP  S  V T+ RI PV  +RLE  VE T++ GG IA R+D+G +  ++PV+Q+  R+    PE++ DT YLD+ +RISRSK G L+I+ +
Sbjct:  200 PKDPGMSAGEKA-SKKEELRSASADVLKTRLVTLAAASNRGQSASVTQRDLIEVLAKRLEELNPNPDPVDMPMIDGVWDLIYSSTQLYKTSPFLLGAATPLVQVGLVRQTIFVDSGEAINEVSVTSFPAISGRVITTMRIAPVSGKRLECKVEKTELKGGSIAGRLDIGMLDVDIPVQQVVERLNGTVPETFFDTVYLDDLMRISRSKNGALYIFVK 415          
BLAST of Ggra9367.t1 vs. uniprot
Match: M2X6M4 (PAP_fibrillin domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X6M4_GALSU)

HSP 1 Score: 189 bits (479), Expect = 5.880e-54
Identity = 94/236 (39.83%), Postives = 149/236 (63.14%), Query Frame = 0
Query:  110 NLRMEVGDEAEDEAPSDVSVPAGDAVKS----MIPGMDDAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAA-VTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTR 340
            N+      + E ++ SD S    D   S       G   ++   +  +LLQY + TDRG +AS  QR A++++  +LE LNP P PVE   +DG W L Y + K + TN  L AA +TPL+ VGQ+RQ+I++  G+LT E ++  FP  + T+ T +RI P+  ERL+++ E+T + G  I ++ DLG +  ++PV+++  R++  +PES++DTYYLDE+LRISR++ G+LF++TR
Sbjct:   83 NVPYSGDGKEEPQSSSDASYKGTDKESSNNGFSKAGSGKSETWKMKVRLLQYCSSTDRGQNASHKQRLAIEELASSLETLNPTPNPVEATQMDGWWYLSYVSEKFYATNALLAAASITPLVSVGQVRQQISIASGELTNEVDLILFPNITGTLVTKARINPLDGERLQVSNETTTIRGKSIGEQFDLGSLKLDIPVDELIRRLKGTSPESFLDTYYLDEDLRISRTQGGRLFVFTR 318          
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A7S1TNQ2 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNQ2_9RHOD)

HSP 1 Score: 185 bits (470), Expect = 3.240e-53
Identity = 95/237 (40.08%), Postives = 147/237 (62.03%), Query Frame = 0
Query:  105 RARPLNLRMEVGDEAEDEAPSDVSVPAGDAVKSMIPGMDDAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPF-LMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTR 340
            R R   +RM+  +  +D  PSD  V +  A +  +   D   R+ LV K+L+ AA T+RG  AS  Q +A++++V+ LE +NPN  P+ET+ I+G W LVY         PF     V  L++ G+I Q I +D   LT EA++ +FP  S TV T++R+TPVG ER+E+ +EST V G  + +++DL  I  ++P+  ++ R+R A PE+Y DTYYLD+ LR+SR K+G L+++ +
Sbjct:   38 RCRRAAVRMQAQNGGDDSMPSDTPVLSNAAEQMNVD--DKHSRSKLVQKVLRLAACTNRGRLASAAQGSAMEELVLQLESVNPNTHPMETDTINGTWKLVYFMKPAGAGGPFEAFLKVQKLVEFGEITQMIDLDRSVLTQEAQLFSFPGVSSTVTTTARVTPVGPERMEVVLESTAVKGNALLEKLDLSAIDLSLPIGDLYERVRGAVPETYFDTYYLDDELRVSRDKRGNLYVFIK 272          
BLAST of Ggra9367.t1 vs. uniprot
Match: M2Y490 (PAP_fibrillin domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y490_GALSU)

HSP 1 Score: 183 bits (464), Expect = 1.140e-51
Identity = 84/197 (42.64%), Postives = 132/197 (67.01%), Query Frame = 0
Query:  145 AKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTRL 341
            A+R     +L Q  A TDRG  +   QR+ V+D+   LE LNP P P++   +DG W L+Y++   ++TNP L+A+VTP L++GQ RQ I++  G+L  E ++ AFP    T+   +R+TPVG ERLEI ++ T + G  +A+R+DLGGI  ++P   I  R++ ++ E ++DTYYLD++LRISR++ G+L I++R+
Sbjct:  130 ARRYNRKIRLYQLCASTDRGQMSRPEQRSEVEDLAAELESLNPTPNPLDGTKLDGSWELIYSSVPFYKTNPLLLASVTPFLRIGQWRQNISLSYGELMNEVDLEAFPGLMGTILQQTRVTPVGGERLEIVIDKTSLKGRSVANRLDLGGIQLDIPFGDILRRVQGSSSELFLDTYYLDDDLRISRTRGGRLLIFSRV 326          
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A5J4Z0A7 (Light-induced protein, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0A7_PORPP)

HSP 1 Score: 170 bits (430), Expect = 2.550e-47
Identity = 101/240 (42.08%), Postives = 140/240 (58.33%), Query Frame = 0
Query:  104 RRARPLNLRMEVGDEAEDEAPSDVSVPAGDAVKSMIPGMDDAKRTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVY---TTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAFPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTR 340
            R AR   LRM+     +D  PSD +    DA +      D   R   + ++L+ AA T+RG  AS  Q A V+D+V+ LE +NPN  P+ET +I+G W LV+   T        P + A    L++ G I QKI +    L  +AE+ AFP  + T+ TS+RITPVG ER+EIT+  T V G  + +RIDL  I   +PV+ I+ R+R    E+YIDTYYLDE LRISR K+G L+I+ +
Sbjct:   36 RHARCAPLRMQ----DDDAMPSD-TFSFSDAAEQSNKS-DGRTRKDAMERILRVAASTNRGRLASATQIAEVEDLVLMLESVNPNLHPMETSIINGNWKLVFFAKTAGSKMALEPLIKAQ--NLIEFGDITQKIDLSSASLVQDAEIFAFPGITGTITTSARITPVGPERMEITLGDTKVKGNSLLNRIDLSSIDKMLPVDAIYQRLRGKPAETYIDTYYLDEALRISRDKRGNLYIFVK 267          
BLAST of Ggra9367.t1 vs. uniprot
Match: A0A6V1MSR7 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSR7_HETAK)

HSP 1 Score: 105 bits (261), Expect = 2.040e-22
Identity = 72/245 (29.39%), Postives = 121/245 (49.39%), Query Frame = 0
Query:  124 PSDVSVPAGDAVKSMIPGMDDAK-RTALVSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGEWNLVYTTAKLFQTNPFLMAA--------------------VTPLLQVGQIRQKITVDDGKLTTEAEVTA-------FPVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPVEQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTR 340
            PSD S    +  +S     +D   R  L S+++   A T+RG  ASE ++  V D+V  LE +NP+P+        G W LVY+  +LF+++PF MA                      T   ++G+++Q +      L +E ++         F +T  TV + + +T  G + L++TV  T V+   I   ++L  +   VPV+ +F R+R + P   ++TYYLD+ +RISR++    F+Y R
Sbjct:   53 PSDTSSMVEEEPESPPESEEDVTYREKLKSEIIALGATTNRGQIASEDEKDIVIDLVYQLESMNPSPK-TNIAASYGTWELVYSDVELFRSSPFFMAVRDLFGDDDEKASQAFSLHRLATSTSEIGKVKQIL--GPSTLVSEVDLKVGTIPSLPFAITG-TVVSDAEVTANGDQSLQVTVGKTKVSNSNILKFLNLEDMGAAVPVKDVFERLRGSVPTVPLNTYYLDDTMRISRTQDEHFFVYIR 293          
The following BLAST results are available for this feature:
BLAST of Ggra9367.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV976.080e-14076.78Chromoplast-specific carotenoid-associated protein... [more]
A0A7S2ZS905.220e-6845.06Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G8T15.870e-6845.33Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6P0591.060e-6350.49PAP_fibrillin domain-containing protein n=1 Tax=Po... [more]
A0A5J4Z5Z58.160e-5544.24Light-induced protein, chloroplastic n=1 Tax=Porph... [more]
M2X6M45.880e-5439.83PAP_fibrillin domain-containing protein n=1 Tax=Ga... [more]
A0A7S1TNQ23.240e-5340.08Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
M2Y4901.140e-5142.64PAP_fibrillin domain-containing protein n=1 Tax=Ga... [more]
A0A5J4Z0A72.550e-4742.08Light-induced protein, chloroplastic n=1 Tax=Porph... [more]
A0A6V1MSR72.040e-2229.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 151..337
e-value: 2.2E-32
score: 112.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..110
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 22..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:106820..107848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9367.t1Ggra9367.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 106820..107848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9367.t1 ID=Ggra9367.t1|Name=Ggra9367.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=343bp
MTDRQLRFGAQPAIGDAPPPRQLPNRQPAHRASRRQSAQSRDDHRDGVPY
PPRAVHLSRFSPCSSRPIMASLTFAKSTLVRLPTNPSLSSFTSRTAPTRH
AVPRRARPLNLRMEVGDEAEDEAPSDVSVPAGDAVKSMIPGMDDAKRTAL
VSKLLQYAAITDRGMSASEMQRAAVDDIVMTLEELNPNPQPVETELIDGE
WNLVYTTAKLFQTNPFLMAAVTPLLQVGQIRQKITVDDGKLTTEAEVTAF
PVTSWTVKTSSRITPVGAERLEITVESTDVTGGKIADRIDLGGISFNVPV
EQIFSRIRNAAPESYIDTYYLDENLRISRSKQGKLFIYTRLD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP