Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra1014.t1.stop1 | Ggra1014.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000027_pilon 533907..533909 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra1014.t1.start1 | Ggra1014.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000027_pilon 535542..535544 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1014.t1 ID=Ggra1014.t1|Name=Ggra1014.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=546bp
MCLHEISLVPCHVPAAPQSRAFTSTVASLELQTPDRFQSQNQESDVPTKH
CDSEMDDIILNIDPSVWNVLKFVILTIITTPVLELMFQRLINTKATYDVL
LGKKLLLCDSQLGLFSLHATHWGSRKNRYLLLLIGIPILTAELLFEFSFS
VDTVDVPAEQRVWLPPSHKAHYTVSESQKLGSSLIEPTQFPIEATDSCIQ
GPSEMIRSGSATQTVDEYLSGFEYHMEGEYVIRKPYLALDNSSILCSKAK
TAGPVNFVVPHVVMVKGSTKAEGLYAQRNTTDSESLRRAFTNGSFEYVGR
LDTAYFSGAVRENGQAVCIRPRDHGFHCALYFENSFILTNSSLFWTKAAF
ENFTMSVVLKATGAPIEGLKNRERRIRLLATLLGSELLRPRLGGRTPSQL
LIGKDKLERIALLTLVVANEEGVGGFREQVGIRSLLKEEKQTATMKRIAF
IPIGVLLFFMFVFIIGDGVLSLLIIYTSSYKVAKVSSWNKFPHRVRTSIQ
WLRGRICDDLLHDGTFEDITSEDISLKATPEIFQMLPKMPYSHQQ* back to topspliced messenger RNA >Ggra1014.t1 ID=Ggra1014.t1|Name=Ggra1014.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1638bp|location=Sequence derived from alignment at tig00000027_pilon:533907..535544- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTGCTTGCATGAAATATCGCTAGTCCCGTGCCATGTTCCCGCAGCTCC
ACAGTCCAGAGCATTCACTTCAACAGTTGCTTCTCTGGAGCTGCAGACAC
CGGATCGATTTCAATCCCAAAACCAGGAGTCCGACGTACCCACGAAGCAC
TGTGATTCCGAAATGGACGACATCATCCTCAACATAGACCCATCCGTTTG
GAATGTCCTCAAATTCGTCATTCTTACCATAATAACCACCCCAGTTCTTG
AATTAATGTTTCAGCGCCTCATCAATACCAAAGCAACCTACGATGTGTTA
CTTGGAAAGAAGCTCCTTCTCTGCGACTCACAATTGGGTCTTTTCTCTCT
TCACGCTACGCACTGGGGCTCGCGCAAGAACAGGTATCTGCTGCTTCTCA
TAGGCATTCCAATTCTGACAGCGGAGCTTCTGTTTGAGTTTTCGTTCTCT
GTTGACACTGTCGATGTTCCAGCTGAACAACGCGTTTGGCTTCCACCGTC
ACACAAGGCACACTACACTGTTTCAGAAAGTCAGAAATTGGGCAGCTCCC
TGATCGAGCCTACTCAGTTCCCAATAGAAGCAACGGATTCATGCATCCAA
GGACCATCTGAAATGATAAGAAGTGGGAGTGCCACCCAAACCGTCGATGA
ATACTTATCAGGATTTGAATACCACATGGAAGGTGAATATGTGATTCGCA
AACCATATCTCGCTTTGGACAATAGCTCAATCCTATGCAGCAAGGCCAAA
ACTGCGGGGCCAGTGAACTTTGTTGTCCCGCACGTTGTCATGGTTAAGGG
TTCCACCAAGGCTGAAGGTTTATATGCGCAAAGAAACACTACTGACTCGG
AAAGCTTACGCAGAGCGTTTACAAATGGCTCATTTGAATATGTTGGCAGG
TTAGATACCGCCTATTTTTCGGGCGCCGTCAGGGAGAATGGCCAAGCGGT
TTGCATTAGACCCAGGGACCATGGTTTTCACTGTGCATTATACTTCGAGA
ACTCGTTCATACTGACAAACTCGTCGCTTTTCTGGACCAAGGCAGCTTTT
GAAAACTTCACAATGTCAGTCGTTTTGAAGGCAACTGGAGCTCCGATCGA
AGGACTGAAGAACCGCGAGCGAAGAATACGACTCCTTGCGACTCTGCTTG
GAAGCGAACTTCTTCGCCCTCGCCTTGGAGGCAGAACCCCATCGCAGCTC
TTAATTGGCAAGGACAAGCTTGAGAGAATTGCCCTTCTGACATTGGTTGT
AGCCAACGAAGAGGGGGTGGGTGGCTTTCGAGAGCAAGTTGGAATTCGGT
CCCTTCTGAAGGAAGAGAAGCAGACGGCAACCATGAAACGCATTGCCTTC
ATTCCAATTGGTGTTTTATTGTTTTTCATGTTTGTATTTATTATTGGCGA
TGGTGTACTCTCGTTGCTGATAATATATACTTCATCTTATAAGGTCGCCA
AGGTATCGAGCTGGAATAAATTTCCACATCGAGTGAGAACTTCAATTCAG
TGGCTCCGGGGGAGAATTTGTGACGACTTACTGCACGATGGGACATTCGA
AGACATAACAAGCGAAGATATTTCTTTGAAGGCGACCCCTGAAATCTTTC
AGATGCTCCCGAAAATGCCGTATTCCCACCAGCAGTGA back to topprotein sequence of Ggra1014.t1 >Ggra1014.t1 ID=Ggra1014.t1|Name=Ggra1014.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=546bp
MCLHEISLVPCHVPAAPQSRAFTSTVASLELQTPDRFQSQNQESDVPTKH
CDSEMDDIILNIDPSVWNVLKFVILTIITTPVLELMFQRLINTKATYDVL
LGKKLLLCDSQLGLFSLHATHWGSRKNRYLLLLIGIPILTAELLFEFSFS
VDTVDVPAEQRVWLPPSHKAHYTVSESQKLGSSLIEPTQFPIEATDSCIQ
GPSEMIRSGSATQTVDEYLSGFEYHMEGEYVIRKPYLALDNSSILCSKAK
TAGPVNFVVPHVVMVKGSTKAEGLYAQRNTTDSESLRRAFTNGSFEYVGR
LDTAYFSGAVRENGQAVCIRPRDHGFHCALYFENSFILTNSSLFWTKAAF
ENFTMSVVLKATGAPIEGLKNRERRIRLLATLLGSELLRPRLGGRTPSQL
LIGKDKLERIALLTLVVANEEGVGGFREQVGIRSLLKEEKQTATMKRIAF
IPIGVLLFFMFVFIIGDGVLSLLIIYTSSYKVAKVSSWNKFPHRVRTSIQ
WLRGRICDDLLHDGTFEDITSEDISLKATPEIFQMLPKMPYSHQQ* back to topmRNA from alignment at tig00000027_pilon:533907..535544- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1014.t1 ID=Ggra1014.t1|Name=Ggra1014.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1638bp|location=Sequence derived from alignment at tig00000027_pilon:533907..535544- (Gracilaria gracilis GNS1m male)
ATGTGCTTGCATGAAATATCGCTAGTCCCGTGCCATGTTCCCGCAGCTCC
ACAGTCCAGAGCATTCACTTCAACAGTTGCTTCTCTGGAGCTGCAGACAC
CGGATCGATTTCAATCCCAAAACCAGGAGTCCGACGTACCCACGAAGCAC
TGTGATTCCGAAATGGACGACATCATCCTCAACATAGACCCATCCGTTTG
GAATGTCCTCAAATTCGTCATTCTTACCATAATAACCACCCCAGTTCTTG
AATTAATGTTTCAGCGCCTCATCAATACCAAAGCAACCTACGATGTGTTA
CTTGGAAAGAAGCTCCTTCTCTGCGACTCACAATTGGGTCTTTTCTCTCT
TCACGCTACGCACTGGGGCTCGCGCAAGAACAGGTATCTGCTGCTTCTCA
TAGGCATTCCAATTCTGACAGCGGAGCTTCTGTTTGAGTTTTCGTTCTCT
GTTGACACTGTCGATGTTCCAGCTGAACAACGCGTTTGGCTTCCACCGTC
ACACAAGGCACACTACACTGTTTCAGAAAGTCAGAAATTGGGCAGCTCCC
TGATCGAGCCTACTCAGTTCCCAATAGAAGCAACGGATTCATGCATCCAA
GGACCATCTGAAATGATAAGAAGTGGGAGTGCCACCCAAACCGTCGATGA
ATACTTATCAGGATTTGAATACCACATGGAAGGTGAATATGTGATTCGCA
AACCATATCTCGCTTTGGACAATAGCTCAATCCTATGCAGCAAGGCCAAA
ACTGCGGGGCCAGTGAACTTTGTTGTCCCGCACGTTGTCATGGTTAAGGG
TTCCACCAAGGCTGAAGGTTTATATGCGCAAAGAAACACTACTGACTCGG
AAAGCTTACGCAGAGCGTTTACAAATGGCTCATTTGAATATGTTGGCAGG
TTAGATACCGCCTATTTTTCGGGCGCCGTCAGGGAGAATGGCCAAGCGGT
TTGCATTAGACCCAGGGACCATGGTTTTCACTGTGCATTATACTTCGAGA
ACTCGTTCATACTGACAAACTCGTCGCTTTTCTGGACCAAGGCAGCTTTT
GAAAACTTCACAATGTCAGTCGTTTTGAAGGCAACTGGAGCTCCGATCGA
AGGACTGAAGAACCGCGAGCGAAGAATACGACTCCTTGCGACTCTGCTTG
GAAGCGAACTTCTTCGCCCTCGCCTTGGAGGCAGAACCCCATCGCAGCTC
TTAATTGGCAAGGACAAGCTTGAGAGAATTGCCCTTCTGACATTGGTTGT
AGCCAACGAAGAGGGGGTGGGTGGCTTTCGAGAGCAAGTTGGAATTCGGT
CCCTTCTGAAGGAAGAGAAGCAGACGGCAACCATGAAACGCATTGCCTTC
ATTCCAATTGGTGTTTTATTGTTTTTCATGTTTGTATTTATTATTGGCGA
TGGTGTACTCTCGTTGCTGATAATATATACTTCATCTTATAAGGTCGCCA
AGGTATCGAGCTGGAATAAATTTCCACATCGAGTGAGAACTTCAATTCAG
TGGCTCCGGGGGAGAATTTGTGACGACTTACTGCACGATGGGACATTCGA
AGACATAACAAGCGAAGATATTTCTTTGAAGGCGACCCCTGAAATCTTTC
AGATGCTCCCGAAAATGCCGTATTCCCACCAGCAGTGA back to topCoding sequence (CDS) from alignment at tig00000027_pilon:533907..535544- >Ggra1014.t1 ID=Ggra1014.t1|Name=Ggra1014.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1638bp|location=Sequence derived from alignment at tig00000027_pilon:533907..535544- (Gracilaria gracilis GNS1m male)
ATGTGCTTGCATGAAATATCGCTAGTCCCGTGCCATGTTCCCGCAGCTCC
ACAGTCCAGAGCATTCACTTCAACAGTTGCTTCTCTGGAGCTGCAGACAC
CGGATCGATTTCAATCCCAAAACCAGGAGTCCGACGTACCCACGAAGCAC
TGTGATTCCGAAATGGACGACATCATCCTCAACATAGACCCATCCGTTTG
GAATGTCCTCAAATTCGTCATTCTTACCATAATAACCACCCCAGTTCTTG
AATTAATGTTTCAGCGCCTCATCAATACCAAAGCAACCTACGATGTGTTA
CTTGGAAAGAAGCTCCTTCTCTGCGACTCACAATTGGGTCTTTTCTCTCT
TCACGCTACGCACTGGGGCTCGCGCAAGAACAGGTATCTGCTGCTTCTCA
TAGGCATTCCAATTCTGACAGCGGAGCTTCTGTTTGAGTTTTCGTTCTCT
GTTGACACTGTCGATGTTCCAGCTGAACAACGCGTTTGGCTTCCACCGTC
ACACAAGGCACACTACACTGTTTCAGAAAGTCAGAAATTGGGCAGCTCCC
TGATCGAGCCTACTCAGTTCCCAATAGAAGCAACGGATTCATGCATCCAA
GGACCATCTGAAATGATAAGAAGTGGGAGTGCCACCCAAACCGTCGATGA
ATACTTATCAGGATTTGAATACCACATGGAAGGTGAATATGTGATTCGCA
AACCATATCTCGCTTTGGACAATAGCTCAATCCTATGCAGCAAGGCCAAA
ACTGCGGGGCCAGTGAACTTTGTTGTCCCGCACGTTGTCATGGTTAAGGG
TTCCACCAAGGCTGAAGGTTTATATGCGCAAAGAAACACTACTGACTCGG
AAAGCTTACGCAGAGCGTTTACAAATGGCTCATTTGAATATGTTGGCAGG
TTAGATACCGCCTATTTTTCGGGCGCCGTCAGGGAGAATGGCCAAGCGGT
TTGCATTAGACCCAGGGACCATGGTTTTCACTGTGCATTATACTTCGAGA
ACTCGTTCATACTGACAAACTCGTCGCTTTTCTGGACCAAGGCAGCTTTT
GAAAACTTCACAATGTCAGTCGTTTTGAAGGCAACTGGAGCTCCGATCGA
AGGACTGAAGAACCGCGAGCGAAGAATACGACTCCTTGCGACTCTGCTTG
GAAGCGAACTTCTTCGCCCTCGCCTTGGAGGCAGAACCCCATCGCAGCTC
TTAATTGGCAAGGACAAGCTTGAGAGAATTGCCCTTCTGACATTGGTTGT
AGCCAACGAAGAGGGGGTGGGTGGCTTTCGAGAGCAAGTTGGAATTCGGT
CCCTTCTGAAGGAAGAGAAGCAGACGGCAACCATGAAACGCATTGCCTTC
ATTCCAATTGGTGTTTTATTGTTTTTCATGTTTGTATTTATTATTGGCGA
TGGTGTACTCTCGTTGCTGATAATATATACTTCATCTTATAAGGTCGCCA
AGGTATCGAGCTGGAATAAATTTCCACATCGAGTGAGAACTTCAATTCAG
TGGCTCCGGGGGAGAATTTGTGACGACTTACTGCACGATGGGACATTCGA
AGACATAACAAGCGAAGATATTTCTTTGAAGGCGACCCCTGAAATCTTTC
AGATGCTCCCGAAAATGCCGTATTCCCACCAGCAGTGA back to top
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