Ggra9407.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9407.t1
Unique NameGgra9407.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length517
Homology
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A2V3ISR5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR5_9FLOR)

HSP 1 Score: 392 bits (1006), Expect = 4.480e-130
Identity = 225/377 (59.68%), Postives = 269/377 (71.35%), Query Frame = 0
Query:  156 MGELRLRFRFPDGRQITLNDVARSDTYGALLSRVQATASLHAPPERVLIAGPPPTPVRARADAVVDTLFDSGQTLIVEPPKRATRARRRAAPQK----------ARAGGVAGVRDLV--AQSVDSGDEWTPDAHAREGDDDDDVVPVRTV----GRKRSRAAASGAAPARAGAADIATLSRNKRRNTGKKDAGEVMETLMGEDARGMIGAELAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEIIDNGGYTFKVRYRALDARAWTEETGMFKLPRELLAEAFRDVLKNQEQREGLRVLSMATVSPRSFWNMVRLFGEKVEEGLMELVPESDWSFIKTRRRRMSAKARRNLEQPADVIKLD 516
            M  LRLRFRFPDG+Q+TL+DV+  +TYGAL+SRV   A L   PERVLIAG PP  V A AD  V T+  SG +LIVEPPKR  R R+R A             AR G V+ V DL   A+ +DSGDEW PDA   E   DD+V+ V       G++R  A  +G A    G   +ATL   KR+ + +KDAGEV+ETL+GEDARG+IGA LA++V     +LD CG+SFR  L+SALE+RQ EAEGERRY+AWLAKRYEIID GG TFKVRYRAL ARAWTEE  MFK+P ELL EAFR VLKN+E+RE LRV +MA VSPRSFWNMVRLFGE+VEE L  LVP+ DWSF+ +RRR++SAKA RNL+Q ADV+ +D
Sbjct:    1 MSPLRLRFRFPDGKQVTLSDVSPDETYGALISRVLKDAKLRVEPERVLIAGHPPRVVEASADVEVSTILKSGDSLIVEPPKRTKRTRKRTATXXXXXXXXXXXDAR-GNVSVVTDLTRNAEEIDSGDEWKPDASNAE---DDEVIEVELTKPGTGKRRRVAKPNGTAVTGGG---VATLDGVKRKRSERKDAGEVLETLVGEDARGLIGAALAQSVEKRVEELDVCGKSFREGLRSALEKRQWEAEGERRYEAWLAKRYEIIDKGGVTFKVRYRALGARAWTEEASMFKVPPELLTEAFRGVLKNREEREKLRVNTMAIVSPRSFWNMVRLFGERVEEELERLVPDGDWSFMGSRRRKLSAKASRNLQQSADVVHID 370          
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A7S0G255 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G255_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 3.460e-20
Identity = 63/199 (31.66%), Postives = 109/199 (54.77%), Query Frame = 0
Query:  314 DIATLSRNKRRNTGKKDAGEVMETLMG--EDARGMIGAELAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEIIDN--GGYTFKVRYRALDARAWTEETGMFKLPRELLAEAFRDVLKNQEQREGLRVLSMATVSPRSFWNMVRLFGEKVEEGLMELVPESDWSFIKTRRRRMSAKARRNLEQ 508
            D+  + + K+   G +     +ET +   + AR  +  +LA A T   + LD    SFR S +  +++R+ E  G  RY + LA  + +++N     +F V ++A + ++W EE+   + P ++L +    +  ++E RE LR  +M+ VSPR FWN+   +  +VE  L ++ P  DWSF+ TR+R +S KA+R  EQ
Sbjct:   75 DVGRVEQTKKTTKGTRKRKPDLETSVDIIDGARSDVAEKLASAATNPLTALDEISSSFRTSFKEEMKKREAERLGHLRYSSVLAGTFHLLENKSNSSSFTVIFKA-EGKSWMEESYP-RYPPDVLQQLIPLIHSDEESRENLRSFNMSVVSPRVFWNVAVQYEGQVEAALKKICPALDWSFLSTRKRTLSEKAKRAKEQ 271          
BLAST of Ggra9407.t1 vs. uniprot
Match: W4G3I2 (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3I2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.130e-13
Identity = 102/361 (28.25%), Postives = 147/361 (40.72%), Query Frame = 0
Query:  160 RLRFRFPDGRQITLNDVARSDTYGALLSRVQATASLHAPPERVLIAGP-PPTPVRARADAVVDTLFDSGQTLIVEPPKRATRARRRAAPQKARAGGVAGVRDLVAQSVDSGDE-WTPDAHAREGDDDDDVVPVRTVGRKRSRAAAS--------------GAAPARAGAADIATLSRNKRRNTGKKDAGEVMETLMGEDARGMIGAELAKAVTGDGSQLDACGQSFRNSLQSAL-EQRQKEAEGERRYQAWLAK-RYEIIDNGGYTFKVRYRALDARAWTEETGMFKLPRELLAEAFRDVLKNQEQREGLRVLSMATVSPRSFWNMVRLFGEKVEEGLMELVPESDWSFIKTRRRRMSAKA 502
            R+R R   G  +   ++  S T+     +  A ASL  PP      G  PP  + A  D  V ++F S  T+++EP   +T    R   Q       AGV   +  +  SGD   TP          D V      G   SR+ A               GA  +   AA    +      +T K+       T +  D++  + ++L  AV+G         +  R + + A+  Q        R   AW  K   +++ +G    KVR+ A   RAW EE      P EL        L     +E L+  +MA VSPR FW++ RL+   V  GL  L+PE DWSF+ TR R +SAKA
Sbjct:    3 RIRVRSKGGASVL--EIDPSCTFLEFQQKALAAASLPGPPSAFAYRGGFPPKEIDASPDEPVRSVFQSSDTVVLEPVVTSTATTTRVPRQLKGTKKFAGVGVKLGAAGSSGDAPTTPQPSV------DVVAAAAAPGEPSSRSNAKKAIIKVVPNRKRFHGAGISLNQAAQAPLIHPPPPASTTKRPR----TTAIHLDSKADVESKLVMAVSGGSGSQSTTDKFLRKATRRAVAHQYDMTLANARLKAAWSTKFTVQVLAHG--RMKVRFLA-GVRAWREEEVDCLQPTELRTALKYVALAGGGNKEMLKPFNMAQVSPRVFWSLARLYDGDVGRGLQTLLPEEDWSFLDTRTRMLSAKA 348          
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A7S2ZE35 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZE35_9RHOD)

HSP 1 Score: 76.6 bits (187), Expect = 1.170e-11
Identity = 65/235 (27.66%), Postives = 105/235 (44.68%), Query Frame = 0
Query:  317 TLSRNKRRNTGKKDAGEVMETLMGEDARGMIGAELAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEIIDNGGYT--FKVRYRALDARAWTEETGMFKLPRELLAEAFRDVLKNQEQREGLRVLSMATVSPRSFWNMV------------------------------------------RLFGEKVEEGLMELVPESDWSFIKTRRRRMSAKARRNLE 507
            T    KR    K D    ++ + G  AR  +  +LA A     + LD   +SFR S Q  +++R+ E  G  RY + LA  + +++N   +  F V ++A + +AW EE+   + P ++L +    +  + E RE LR  +M+ VSPR FWN+                                           R +  +VE  L ++ P+ DWSF+ TR+R +S KA+R  E
Sbjct:   82 TKKTPKRTRKRKPDLETTIDLVDG--ARSDVAEKLAFAAGNPLTALDEISKSFRASFQEEMKKREAERLGHWRYSSALAGTFRLLENKSTSSSFTVSFKA-EGKAWLEESYP-RYPPDVLQQLIPLIHSDVESRENLRSFNMSIVSPRVFWNVAVQYEGQVGDALPRSQCFMNSVGFVRSQPLVVSGGQHTVTEKSRRYFRQVEAALKKICPDLDWSFLSTRKRTLSEKAKRAKE 312          
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A1X6NW26 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW26_PORUM)

HSP 1 Score: 70.5 bits (171), Expect = 2.520e-9
Identity = 59/185 (31.89%), Postives = 85/185 (45.95%), Query Frame = 0
Query:  366 GQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEIIDNGG-------YTFKVRYRALDARAWTEET--------------------GMFKLPRE-LLAEAFRDVLKN-QEQREGLRVLSMATVSPRSFWNMVRLF-------------------GEKVEEGLMELVPESDWSFIKTRRRRMSAKA 502
            G++ R +L  AL  R + A GE R+ A +A RYE++   G        +F+VR++ L  R WTEE                     G F+   E +LA     VL +  +    L+   +A VSPR FWN+VR+                    GE++E  L  LVP +DW+ +  RRR +SAKA
Sbjct:  188 GKALRGALAKALAARARAAAGEARHAAVMAGRYELLPGAGRSTASADVSFRVRWKELGRRKWTEEPAAPXXXXXXXXXXXXXAEVGGEFQAYGEDVLAGVLESVLASGPDAARQLQPADLARVSPRLFWNLVRVGDAAXXXXXXXXXXXXXXXGGERLEATLRRLVPGADWAALWGRRRVLSAKA 372          
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A7S3YVT9 (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YVT9_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 9.640e-9
Identity = 54/183 (29.51%), Postives = 91/183 (49.73%), Query Frame = 0
Query:  341 EDARGMIGAELAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEIIDNGGYTFK--------VRYRALDARAWTEETGMFKLPRELLAEAFRDVLKNQEQREGLRVLSMATVSPRSFWNMVRLFGEKVEEGLMELVPESDWSFIKTRRRRMSAKARRN-LEQPADVIK 514
            + A G +G  LA+A  GD +        FRN+L   L   +  ++G  R  + ++  +   +   Y+          V +  +  + + EE  +  LP  LL     +V++N    + LR   MA  SPR FW++V+  G ++E  L  L+P+ +W+ IKTR+RR SAKA  N L++  + +K
Sbjct:  126 DKAVGELGVGLARAADGDPTM-----DFFRNALSEGLRGAEAISKGTARMFSIMSNNFSFEEKKVYSLSSGVPTKIVVTFMDISKKKYKEEIDL--LPAVLLKAVLLEVVQNGGT-DFLRPDEMARCSPRVFWSIVKAHGPEIEMALRALLPDVNWTKIKTRKRRKSAKALENELQEKMEAMK 300          
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A0P1AEK9 (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEK9_PLAHL)

HSP 1 Score: 66.6 bits (161), Expect = 6.040e-8
Identity = 57/164 (34.76%), Postives = 78/164 (47.56%), Query Frame = 0
Query:  347 IGAELAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYE------IIDNGGYTFKVRYRALDA-RAWTEETGMFKLPRELLAEAFRDVLKNQEQ-REGLRVLSMATVSPRSFWNMVRLFGEKVEEGLMELVPESDWSFIKTRRRRMSAKA 502
            +   L  AV+G     D   + FR   ++A+E + +      R  A LA  +E      I    G   K+R R  +  R W EET  F    EL A     +L   E  RE L+  +MA VS R FW++  ++   V EGL +LVP+ DWSFI  R R +S KA
Sbjct:  184 VEVNLVNAVSGQSR--DRAVKFFRAVTRNAVEHQYELTLATARLNAALAHNFETEELLTIRRGDGSAAKLRVRFKETPRKWKEETVDFLKKYELQAILKYVLLSGGETGREMLKPFNMAQVSTRVFWSIAHMYDGNVAEGLADLVPDEDWSFIDIRTRVLSEKA 345          
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A6A3U8F4 (CW-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U8F4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 6.500e-8
Identity = 99/387 (25.58%), Postives = 149/387 (38.50%), Query Frame = 0
Query:  161 LRFRFPDGRQITL--NDVARSDTYGALLSRVQATASLHAPPERVLIAGPPPTPVRARADAVVDTLFDSGQTLIVEP------------------PKRATRARRRAAPQKARAGGVAGVRDLVA---------------QSVDSGDEWTPDAHARE-GDDDDDVVPVRTVGRKRSRAAASGAAPARAGAADIATLSRNKRRNTGKKDAGEVMETLMGEDARGMIGAELAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEI--------IDNGGYTFKVRYRALDARAWTEETGMFKLPRELLAEAFRDVLKNQEQ-REGLRVLSMATVSPRSFWNMVRLFGEKVEEGLMELVPESDWSFIKTRRRRMSAKA 502
            +R R P G+Q+ L  +  A  +T+  L ++     +  +P  R    G PP  V     A+V ++F++  T++V+                   P R  RA  +    KA  GGV  +   ++                 + S  E  P   A   G  DDD  P R    +RSRA                        N   K+  E+                L  AV+G     D   + FR + ++A+E + +      R  A L++ +EI         D      ++R++    R W EE        EL A     +L   E  RE L+  +MA VS R FW++ RL+   V  GL  +VP+ DWSF+ TR R MS KA
Sbjct:    6 MRLRGPRGKQVVLKIDPNASFETFSELAAKELGLKATDSPTFR---RGFPPRVVETDGSALVKSVFEANDTVVVDTNSGAAAPVQAAAPSAKKTPARPKRATTKKPAAKAPRGGVHTLNPPISTKKKAPPKRKITGNGHQLGSSLESNPSEAAEAIGTCDDDQEPQRKY--RRSRAI-----------------------NLTSKEDVEI---------------SLVNAVSGQSK--DRAAKFFRAATKNAVEHQYEITLATARLNAALSRNFEIEELSTTRRADGSAAKLRIRFKETP-RKWKEEMVDLLKTDELQAILKYVLLSGGETGREMLKPFNMAQVSTRVFWSIARLYDGDVAAGLAVIVPDEDWSFLDTRTRVMSEKA 346          
BLAST of Ggra9407.t1 vs. uniprot
Match: A0A7S2W9T9 (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W9T9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.720e-6
Identity = 56/205 (27.32%), Postives = 94/205 (45.85%), Query Frame = 0
Query:  318 LSRNKRRNTGKKDAGEVMETLMGEDARGMIGAELAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEII-------DNGGYTFKVRYRALDARAWTEETGMFKLPRELLAEAFRDVL--KNQEQ----REGLRVLSMATVSPRSFWNMVRLFGE--KVEEGLMELVPESDWSFIKTRRRRMSAKARRNLE 507
            + R +  N  KK AGE             I   L KA    G   D      R + + A++ + ++  G  R++A    ++ I+       ++G    ++ Y A  +R       +  LP E+L      ++   N+ +    RE LR   MA +SP +FW++V + G    +E  L  L+PE DW+F+K+R+R +S KA + LE
Sbjct:   85 VRRRRGPNKKKKSAGETKRD---------ISESLIKAF--QGGPRDNVSVFLRGASRQAVKTQYEKRAGNDRFKAAREGKFRIVGESCTDDEHGARNVEIEY-ATGSRGAKSRDEVKLLPEEILKATITYLMTASNESELCQVRENLRPHVMAEISPSTFWSLVHVCGGGMDLETKLCSLLPELDWTFLKSRKRTISEKAAQALE 277          
The following BLAST results are available for this feature:
BLAST of Ggra9407.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3ISR54.480e-13059.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0G2553.460e-2031.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
W4G3I22.130e-1328.25Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S2ZE351.170e-1127.66Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NW262.520e-931.89Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3YVT99.640e-929.51Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A0P1AEK96.040e-834.76Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A6A3U8F46.500e-825.58CW-type domain-containing protein n=5 Tax=Phytopht... [more]
A0A7S2W9T95.720e-627.32Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..331
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:459479..464344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9407.t1Ggra9407.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 459479..464344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9407.t1 ID=Ggra9407.t1|Name=Ggra9407.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=517bp
MTKLRLKLLVSYIDSLFFDSQSVIATGLIRRPSFTNKSTYGVDMKYKERM
DEQEFLPLIGQSYVIMIVRPGLERRKATDKSEVESHRRRLEALWSTQGHC
EAEQSIDALRFTSPRRSRTQACAKHRTTPRPRQWPPSPNRVLPPAYPRSR
PLVRVMGELRLRFRFPDGRQITLNDVARSDTYGALLSRVQATASLHAPPE
RVLIAGPPPTPVRARADAVVDTLFDSGQTLIVEPPKRATRARRRAAPQKA
RAGGVAGVRDLVAQSVDSGDEWTPDAHAREGDDDDDVVPVRTVGRKRSRA
AASGAAPARAGAADIATLSRNKRRNTGKKDAGEVMETLMGEDARGMIGAE
LAKAVTGDGSQLDACGQSFRNSLQSALEQRQKEAEGERRYQAWLAKRYEI
IDNGGYTFKVRYRALDARAWTEETGMFKLPRELLAEAFRDVLKNQEQREG
LRVLSMATVSPRSFWNMVRLFGEKVEEGLMELVPESDWSFIKTRRRRMSA
KARRNLEQPADVIKLD*
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