Ggra9399.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9399.t1
Unique NameGgra9399.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length669
Homology
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BLAST of Ggra9399.t1 vs. uniprot
Match: A0A2V3ISN1 (BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN1_9FLOR)

HSP 1 Score: 370 bits (949), Expect = 1.960e-113
Identity = 188/319 (58.93%), Postives = 236/319 (73.98%), Query Frame = 0 
Query:  132 DLSEKPQHSFVSDASRVTSKLFDALVNNRVGVCDAHIHTKENLCVPISRSVLTALNSYLADYACPNTSSGANCSTATHVKSVPISSQQLRHILEFIYTNDCSFIRNLRSSVLWRKDNDVPPTAVV-DVIQLAYAAHICHTPDLSTWCEKTALAIVRHRPTFLCSALNTVMNFPTTNADSLIDLWMSRVFEQPAHFLGSMQKESSPFEAHA-STEELRCSVLELDANAFAMILKTCHGNDEYFFRAVYCWATRGYTEFSKAGPRWRNAIKLARRIDFTNVSTKFLLGFVDTSGLVDQESMFSIYRSHLAAKSNLPPSYGL 448
            ++ ++ Q  FVSD SRVTS L DAL+N+RVGVCDAH+HT +N  VP+SRSVLT LNSYLA Y C   S         + + +P+SSQ LRH+LEFIYTNDCSF+R LRS  LWRK++++P    + +VI LA+AAHICHTPDLS W E TA  +VR  P  +C+AL TV+   T N++ LI  W++R+FEQPA FLG M+  + P E    S      SVL+LDAN+FA IL   H + EY+FRA+YCWATRGYT+ S+AGPRWRNA +LA+RIDFT VS+KFLLGFVD+SGLVD+++M SIYR  LA+KSNLP SYGL
Sbjct:  217 EIYKQRQTFFVSDPSRVTSLLCDALLNSRVGVCDAHLHTTDNSIVPVSRSVLTVLNSYLASYTCAVPSKPKE-EHPPNFQCLPLSSQHLRHVLEFIYTNDCSFLRKLRSKHLWRKESELPSADTISNVILLAHAAHICHTPDLSAWSEGTARELVRRNPPLVCAALRTVLKNTTANSEQLISSWLARIFEQPAAFLGRMRTGNVPIEHQQNSAAPGGLSVLDLDANSFAKILAPDHHHHEYYFRAIYCWATRGYTDHSRAGPRWRNAKRLAQRIDFTKVSSKFLLGFVDSSGLVDEQTMASIYRMQLASKSNLPKSYGL 534
The following BLAST results are available for this feature:
BLAST of Ggra9399.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISN11.960e-11358.93BTB domain-containing protein n=1 Tax=Gracilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 141..283
e-value: 3.6E-7
score: 32.1
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 150..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 558..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..510
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 164..236
score: 9.165172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:353956..355962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9399.t1Ggra9399.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 353956..355962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9399.t1 ID=Ggra9399.t1|Name=Ggra9399.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=669bp
MTASREPSSSRTRPTSRRSGRRSGAPPVDSASPNQRTNPSNNTRARSSPR
GVGTDNGYQSSARYPRPSPYRKGRRTSRAKANGHPPHESPPGSAPHPSSD
RTGRRNSEAKANAYPLPALPLKPDCVPHLPFDLSEKPQHSFVSDASRVTS
KLFDALVNNRVGVCDAHIHTKENLCVPISRSVLTALNSYLADYACPNTSS
GANCSTATHVKSVPISSQQLRHILEFIYTNDCSFIRNLRSSVLWRKDNDV
PPTAVVDVIQLAYAAHICHTPDLSTWCEKTALAIVRHRPTFLCSALNTVM
NFPTTNADSLIDLWMSRVFEQPAHFLGSMQKESSPFEAHASTEELRCSVL
ELDANAFAMILKTCHGNDEYFFRAVYCWATRGYTEFSKAGPRWRNAIKLA
RRIDFTNVSTKFLLGFVDTSGLVDQESMFSIYRSHLAAKSNLPPSYGLQR
VNENTRKRKSDTKDHIVNHETNTPQKKQRVDSGQATASNKLTHDASLGTT
SVQTHQSRPPYPAPAQDEMLEDDADGNSLALPVSLTPVHQNQTSVTAIEA
PHTREYSAPASFPQNSSLVHGEGGVDQNVVHGSEGQITHSETPQTSTHSN
GASLLEQTPLASMPQLAKNDVVRDVSGADSQYEQMTACPASRVKPVSTKV
KEEDVQRKVKEEYEIIGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011333SKP1/BTB/POZ_sf
IPR000210BTB/POZ_dom