Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra1019.t1.stop1 | Ggra1019.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000027_pilon 592504..592506 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra1019.t1.intron1 | Ggra1019.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000027_pilon 593505..593572 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra1019.t1.start1 | Ggra1019.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000027_pilon 593751..593753 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1019.t1 ID=Ggra1019.t1|Name=Ggra1019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=394bp
MRTPLPNIQSTKTAGIQISSDYENDNATQNVPLPLPNIQIPSSLQTPAIT
KPSPGNTNFLSRNDTEASTAKSAGRKQIKTQVQKNMIRREKAFTEEEALS
LAKAWVMQSMKEPNQTESTLWNDIATICEKRFMMQRSSESLRCKWTQLAR
KSQHFLAARRKVKAQKISGVTAEDVEALAIELYRKKASRKDAQGVHQYAT
PFKFISAAEYLSTQQKFEADLVKQDPVDNIANTLSTEAHNITVAERGAET
SRADAKDGNGSIEIDIVGKPSLSTRSNRSRPTGVKRLKQDESLEKVGANL
THTLEELSKKVEAGNQVLMAMKQQGEDLGEADNDCRLLQLLDRDSDEYKD
ILADVLARRKNRMRKRSACSALEDEREGKKRKPVEESLEVLDE* back to topspliced messenger RNA >Ggra1019.t1 ID=Ggra1019.t1|Name=Ggra1019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1182bp|location=Sequence derived from alignment at tig00000027_pilon:592504..593753- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGACGCCATTGCCAAACATTCAAAGCACAAAAACAGCTGGTATACA
AATATCATCCGATTACGAGAATGACAACGCTACACAAAACGTCCCGCTGC
CACTTCCCAACATCCAAATTCCTAGCAGTTTGCAAACACCGGCTATTACC
AAGCCTTCACCGGGAAACACAAATTTTCTGAGTAGAAATGATACAGAAGC
TTCAACCGCGAAGTCTGCAGGTAGAAAACAGATCAAAACACAAGTGCAAA
AGAACATGATTAGAAGAGAGAAAGCGTTTACTGAGGAGGAAGCTTTGAGC
CTTGCAAAAGCTTGGGTAATGCAGTCCATGAAAGAGCCAAACCAAACTGA
GTCAACTTTGTGGAACGACATCGCCACAATTTGCGAAAAACGCTTTATGA
TGCAGAGGTCCAGCGAGTCTCTGCGCTGCAAATGGACGCAACTCGCGCGT
AAATCGCAGCATTTTCTTGCTGCACGTAGAAAGGTCAAGGCACAAAAGAT
CTCCGGAGTGACAGCCGAAGACGTAGAGGCTCTAGCTATAGAGCTTTACA
GAAAGAAGGCAAGTAGAAAGGATGCACAAGGTGTGCATCAATACGCAACA
CCATTCAAATTCATCAGTGCTGCTGAATACTTGTCCACACAACAAAAATT
TGAGGCGGACCTCGTGAAGCAAGATCCTGTAGATAACATTGCCAATACTT
TGAGCACCGAAGCACACAATATTACTGTAGCAGAGAGAGGAGCAGAGACA
TCACGGGCGGATGCTAAAGACGGCAATGGCAGTATCGAGATCGACATAGT
TGGCAAGCCATCTCTGTCTACACGCAGCAACCGTTCTCGCCCTACAGGAG
TGAAACGACTCAAACAAGATGAATCTCTAGAAAAAGTGGGAGCCAACCTG
ACTCACACCTTGGAAGAACTTTCGAAAAAGGTGGAAGCCGGCAATCAAGT
TTTAATGGCGATGAAGCAGCAGGGTGAGGATCTGGGGGAGGCTGATAATG
ACTGCAGGCTGTTGCAGCTCCTGGATAGAGATTCAGACGAATACAAAGAT
ATACTGGCAGACGTTCTGGCGAGGAGGAAGAACAGAATGCGCAAACGTAG
CGCCTGTAGCGCACTAGAGGACGAAAGAGAGGGAAAGAAACGTAAACCCG
TTGAAGAGAGTTTAGAGGTATTGGATGAATAG back to topprotein sequence of Ggra1019.t1 >Ggra1019.t1 ID=Ggra1019.t1|Name=Ggra1019.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MRTPLPNIQSTKTAGIQISSDYENDNATQNVPLPLPNIQIPSSLQTPAIT
KPSPGNTNFLSRNDTEASTAKSAGRKQIKTQVQKNMIRREKAFTEEEALS
LAKAWVMQSMKEPNQTESTLWNDIATICEKRFMMQRSSESLRCKWTQLAR
KSQHFLAARRKVKAQKISGVTAEDVEALAIELYRKKASRKDAQGVHQYAT
PFKFISAAEYLSTQQKFEADLVKQDPVDNIANTLSTEAHNITVAERGAET
SRADAKDGNGSIEIDIVGKPSLSTRSNRSRPTGVKRLKQDESLEKVGANL
THTLEELSKKVEAGNQVLMAMKQQGEDLGEADNDCRLLQLLDRDSDEYKD
ILADVLARRKNRMRKRSACSALEDEREGKKRKPVEESLEVLDE* back to topmRNA from alignment at tig00000027_pilon:592504..593753- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1019.t1 ID=Ggra1019.t1|Name=Ggra1019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1250bp|location=Sequence derived from alignment at tig00000027_pilon:592504..593753- (Gracilaria gracilis GNS1m male)
ATGAGGACGCCATTGCCAAACATTCAAAGCACAAAAACAGCTGGTATACA
AATATCATCCGATTACGAGAATGACAACGCTACACAAAACGTCCCGCTGC
CACTTCCCAACATCCAAATTCCTAGCAGTTTGCAAACACCGGCTATTACC
AAGCCTTCACCGGGAAACACAAATTTTCTGAGTACGTAGTCAATGACAAA
AGAGTCTCTACAATGAACAAGCATGAACTAACTTTTCCTTTGTTTGCAGG
TAGAAATGATACAGAAGCTTCAACCGCGAAGTCTGCAGGTAGAAAACAGA
TCAAAACACAAGTGCAAAAGAACATGATTAGAAGAGAGAAAGCGTTTACT
GAGGAGGAAGCTTTGAGCCTTGCAAAAGCTTGGGTAATGCAGTCCATGAA
AGAGCCAAACCAAACTGAGTCAACTTTGTGGAACGACATCGCCACAATTT
GCGAAAAACGCTTTATGATGCAGAGGTCCAGCGAGTCTCTGCGCTGCAAA
TGGACGCAACTCGCGCGTAAATCGCAGCATTTTCTTGCTGCACGTAGAAA
GGTCAAGGCACAAAAGATCTCCGGAGTGACAGCCGAAGACGTAGAGGCTC
TAGCTATAGAGCTTTACAGAAAGAAGGCAAGTAGAAAGGATGCACAAGGT
GTGCATCAATACGCAACACCATTCAAATTCATCAGTGCTGCTGAATACTT
GTCCACACAACAAAAATTTGAGGCGGACCTCGTGAAGCAAGATCCTGTAG
ATAACATTGCCAATACTTTGAGCACCGAAGCACACAATATTACTGTAGCA
GAGAGAGGAGCAGAGACATCACGGGCGGATGCTAAAGACGGCAATGGCAG
TATCGAGATCGACATAGTTGGCAAGCCATCTCTGTCTACACGCAGCAACC
GTTCTCGCCCTACAGGAGTGAAACGACTCAAACAAGATGAATCTCTAGAA
AAAGTGGGAGCCAACCTGACTCACACCTTGGAAGAACTTTCGAAAAAGGT
GGAAGCCGGCAATCAAGTTTTAATGGCGATGAAGCAGCAGGGTGAGGATC
TGGGGGAGGCTGATAATGACTGCAGGCTGTTGCAGCTCCTGGATAGAGAT
TCAGACGAATACAAAGATATACTGGCAGACGTTCTGGCGAGGAGGAAGAA
CAGAATGCGCAAACGTAGCGCCTGTAGCGCACTAGAGGACGAAAGAGAGG
GAAAGAAACGTAAACCCGTTGAAGAGAGTTTAGAGGTATTGGATGAATAG
back to topCoding sequence (CDS) from alignment at tig00000027_pilon:592504..593753- >Ggra1019.t1 ID=Ggra1019.t1|Name=Ggra1019.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1182bp|location=Sequence derived from alignment at tig00000027_pilon:592504..593753- (Gracilaria gracilis GNS1m male)
ATGAGGACGCCATTGCCAAACATTCAAAGCACAAAAACAGCTGGTATACA
AATATCATCCGATTACGAGAATGACAACGCTACACAAAACGTCCCGCTGC
CACTTCCCAACATCCAAATTCCTAGCAGTTTGCAAACACCGGCTATTACC
AAGCCTTCACCGGGAAACACAAATTTTCTGAGTAGAAATGATACAGAAGC
TTCAACCGCGAAGTCTGCAGGTAGAAAACAGATCAAAACACAAGTGCAAA
AGAACATGATTAGAAGAGAGAAAGCGTTTACTGAGGAGGAAGCTTTGAGC
CTTGCAAAAGCTTGGGTAATGCAGTCCATGAAAGAGCCAAACCAAACTGA
GTCAACTTTGTGGAACGACATCGCCACAATTTGCGAAAAACGCTTTATGA
TGCAGAGGTCCAGCGAGTCTCTGCGCTGCAAATGGACGCAACTCGCGCGT
AAATCGCAGCATTTTCTTGCTGCACGTAGAAAGGTCAAGGCACAAAAGAT
CTCCGGAGTGACAGCCGAAGACGTAGAGGCTCTAGCTATAGAGCTTTACA
GAAAGAAGGCAAGTAGAAAGGATGCACAAGGTGTGCATCAATACGCAACA
CCATTCAAATTCATCAGTGCTGCTGAATACTTGTCCACACAACAAAAATT
TGAGGCGGACCTCGTGAAGCAAGATCCTGTAGATAACATTGCCAATACTT
TGAGCACCGAAGCACACAATATTACTGTAGCAGAGAGAGGAGCAGAGACA
TCACGGGCGGATGCTAAAGACGGCAATGGCAGTATCGAGATCGACATAGT
TGGCAAGCCATCTCTGTCTACACGCAGCAACCGTTCTCGCCCTACAGGAG
TGAAACGACTCAAACAAGATGAATCTCTAGAAAAAGTGGGAGCCAACCTG
ACTCACACCTTGGAAGAACTTTCGAAAAAGGTGGAAGCCGGCAATCAAGT
TTTAATGGCGATGAAGCAGCAGGGTGAGGATCTGGGGGAGGCTGATAATG
ACTGCAGGCTGTTGCAGCTCCTGGATAGAGATTCAGACGAATACAAAGAT
ATACTGGCAGACGTTCTGGCGAGGAGGAAGAACAGAATGCGCAAACGTAG
CGCCTGTAGCGCACTAGAGGACGAAAGAGAGGGAAAGAAACGTAAACCCG
TTGAAGAGAGTTTAGAGGTATTGGATGAATAG back to top
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