Ggra6240.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6240.t1
Unique NameGgra6240.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length130
Homology
BLAST of Ggra6240.t1 vs. uniprot
Match: A0A2V3IUJ8 (Phosphoribulokinase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUJ8_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 1.210e-51
Identity = 88/104 (84.62%), Postives = 92/104 (88.46%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVSVSSS 129
            C RKLTCS PGIKFH GP TY D+PVSVFEVDGGFEKLEE+VYVE HIERSGTKFFGEIT SLL NP APGS NGTGLVQVLMAMMMRNVYEK+T + VSVSSS
Sbjct:  330 CGRKLTCSYPGIKFHYGPDTYYDKPVSVFEVDGGFEKLEEMVYVETHIERSGTKFFGEITQSLLRNPTAPGSKNGTGLVQVLMAMMMRNVYEKVTGKKVSVSSS 433          
BLAST of Ggra6240.t1 vs. uniprot
Match: Q24LS9 (Phosphoribulokinase n=2 Tax=Chondrus crispus TaxID=2769 RepID=Q24LS9_CHOCR)

HSP 1 Score: 164 bits (414), Expect = 7.990e-47
Identity = 78/104 (75.00%), Postives = 90/104 (86.54%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVSVSSS 129
            C RKLTCS PGIKFH GP TY D+ V+VFEVDGGFEKL+E+VYVE HIER+GTKFFGEIT SLL NP APGS NGTGL+QV+MAMMMR+VYEK+T + V+VS +
Sbjct:  274 CGRKLTCSYPGIKFHYGPDTYYDKEVAVFEVDGGFEKLDEMVYVETHIERAGTKFFGEITQSLLRNPTAPGSKNGTGLIQVIMAMMMRSVYEKVTGKPVAVSGN 377          
BLAST of Ggra6240.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: phosphoribulokinase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD466 (LOW QUALITY PROTEIN: phosphoribulokinase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD466)

HSP 1 Score: 152 bits (384), Expect = 2.170e-42
Identity = 71/101 (70.30%), Postives = 83/101 (82.18%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVSV 126
            C RKLTCS PGIKFH GP TY D+ VSV EVDG F+KLEE++YVE H+  +GTKF+GE+T  LL NPNAPGSTNGTGL QVLMAMMMR+VYE IT + V++
Sbjct:  274 CGRKLTCSYPGIKFHYGPDTYFDKEVSVLEVDGAFDKLEEMIYVESHLNNTGTKFYGEMTQQLLKNPNAPGSTNGTGLFQVLMAMMMRSVYESITGKKVAI 374          
BLAST of Ggra6240.t1 vs. uniprot
Match: A0A1X6PA11 (Phosphoribulokinase, chloroplastic n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PA11_PORUM)

HSP 1 Score: 137 bits (346), Expect = 2.630e-36
Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSV 124
            C +KLTC  PGIKFH GP  Y D  VSV EVDG F KLEE++YVE H+  + TKF+GE+T  LL NPNAPGS+NGTGL QVL+A+ MR +YEKIT R V
Sbjct:  331 CGKKLTCGYPGIKFHYGPDNYFDNEVSVLEVDGSFAKLEEMIYVETHLNNTSTKFYGEMTQQLLKNPNAPGSSNGTGLCQVLIALKMREMYEKITGRKV 429          
BLAST of Ggra6240.t1 vs. uniprot
Match: A0A7S2ZFT4 (Phosphoribulokinase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFT4_9RHOD)

HSP 1 Score: 130 bits (328), Expect = 1.020e-35
Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVS 125
            C +KL CS PGIKF  GP TY D+ V V + DGGFEKL+E++YVE H+  + TKF+GE+T  LL N +APGS NGTGL QV+MA+ MR  YE+IT RS++
Sbjct:  108 CGKKLACSYPGIKFRSGPDTYYDKSVDVVDCDGGFEKLDEMIYVESHMNNTSTKFYGEVTQQLLKNSSAPGSKNGTGLFQVIMALKMREAYERITGRSIT 207          
BLAST of Ggra6240.t1 vs. uniprot
Match: A0A7S1TAW6 (Phosphoribulokinase, chloroplastic n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAW6_9RHOD)

HSP 1 Score: 135 bits (341), Expect = 1.810e-35
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVS 125
            C RKLTC  PGIKFH GP TY  + VS+ EVDG F KL+E++YVE H+  +GTKF+GEIT SLL NP APGS NGTGL QVL+A+ MR VYE+++ + V+
Sbjct:  352 CGRKLTCPFPGIKFHYGPDTYAGKDVSMLEVDGNFAKLDELIYVESHLNNTGTKFYGEITQSLLRNPTAPGSNNGTGLFQVLLALKMREVYERVSGKIVA 451          
BLAST of Ggra6240.t1 vs. uniprot
Match: A3QQP4 (Chloroplast phosphoribulokinase (Fragment) n=1 Tax=Mesostigma viride TaxID=41882 RepID=A3QQP4_MESVI)

HSP 1 Score: 125 bits (315), Expect = 6.930e-35
Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVSVSS 128
            C RKLTCS PGIKF  GP TY    VSV E+DG F+KLEE++YVE H+ ++ TKF+GE+T  +L + + PGS NGTGL Q L+AM +R VYE+++ + VSVS+
Sbjct:   18 CGRKLTCSYPGIKFFYGPDTYYGNEVSVLEMDGQFDKLEELIYVESHLSQTSTKFYGEVTQQMLKHSDFPGSNNGTGLFQTLVAMKVREVYERLSSKPVSVSA 120          
BLAST of Ggra6240.t1 vs. uniprot
Match: M2X324 (Phosphoribulokinase, chloroplastic n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X324_GALSU)

HSP 1 Score: 131 bits (330), Expect = 7.580e-34
Identity = 60/100 (60.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVS 125
            C RKLTCS PGIKFH GP  + +  VSV EVDG FEKLEE++Y+E H+  + TKF+GEIT  LL N +APGS NGTGL QVL A+ MR +YE++T +S++
Sbjct:  354 CGRKLTCSYPGIKFHYGPDNWYNHDVSVLEVDGNFEKLEELIYIESHLNNTSTKFYGEITQQLLRNSSAPGSNNGTGLFQVLTALKMRQLYEELTGKSIA 453          
BLAST of Ggra6240.t1 vs. uniprot
Match: A0A5J4YZ47 (Phosphoribulokinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ47_PORPP)

HSP 1 Score: 128 bits (321), Expect = 1.040e-32
Identity = 60/102 (58.82%), Postives = 77/102 (75.49%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVSVS 127
            C RKL+CS PGIKFH GP +Y  + V+V E+DG  EKL+E++YVE H+  + TKF+GE+T  LL NP APG+ NGTGL QVL+A+ MR VYEK T R +SV+
Sbjct:  328 CGRKLSCSYPGIKFHYGPDSYFGEDVTVLEMDGVVEKLDEMIYVESHLNNTETKFYGEMTQQLLKNPTAPGTFNGTGLFQVLIALKMREVYEKCTGRKLSVN 429          
BLAST of Ggra6240.t1 vs. uniprot
Match: A0A087SM57 (Phosphoribulokinase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SM57_AUXPR)

HSP 1 Score: 124 bits (312), Expect = 6.200e-32
Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:   26 CVRKLTCSSPGIKFHCGPGTYCDQPVSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNGTGLVQVLMAMMMRNVYEKITDRSVS 125
            C RKLTCS PGIK   GP TY  + VSV E+DG FEKLEE++YVE H+  + TKF+GEIT  +L N N PGS NGTGL QV+  + +R VYE++T R V+
Sbjct:  251 CGRKLTCSFPGIKLFYGPDTYYGEDVSVLEMDGQFEKLEELIYVESHLSNTSTKFYGEITQQMLKNSNFPGSKNGTGLFQVITGLKVREVYEQLTQREVA 350          
The following BLAST results are available for this feature:
BLAST of Ggra6240.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUJ81.210e-5184.62Phosphoribulokinase, chloroplastic n=1 Tax=Gracila... [more]
Q24LS97.990e-4775.00Phosphoribulokinase n=2 Tax=Chondrus crispus TaxID... [more]
LOW QUALITY PROTEIN: phosphoribulokinase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD4662.170e-4270.30LOW QUALITY PROTEIN: phosphoribulokinase-like n=1 ... [more]
A0A1X6PA112.630e-3664.65Phosphoribulokinase, chloroplastic n=2 Tax=Porphyr... [more]
A0A7S2ZFT41.020e-3559.00Phosphoribulokinase n=1 Tax=Rhodosorus marinus Tax... [more]
A0A7S1TAW61.810e-3562.00Phosphoribulokinase, chloroplastic n=1 Tax=Compsop... [more]
A3QQP46.930e-3556.31Chloroplast phosphoribulokinase (Fragment) n=1 Tax... [more]
M2X3247.580e-3460.00Phosphoribulokinase, chloroplastic n=2 Tax=Galdier... [more]
A0A5J4YZ471.040e-3258.82Phosphoribulokinase n=1 Tax=Porphyridium purpureum... [more]
A0A087SM576.200e-3258.00Phosphoribulokinase n=2 Tax=Auxenochlorella protot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10285:SF150PHOSPHORIBULOKINASEcoord: 24..122
NoneNo IPR availablePANTHERPTHR10285URIDINE KINASEcoord: 24..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:123412..125891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6240.t1Ggra6240.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 123412..125891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6240.t1 ID=Ggra6240.t1|Name=Ggra6240.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=130bp
MKDPVEVFKAFTCANMRLGIQAFSFCVRKLTCSSPGIKFHCGPGTYCDQP
VSVFEVDGGFEKLEEIVYVEMHIERSGTKFFGEITPSLLPNPNAPGSTNG
TGLVQVLMAMMMRNVYEKITDRSVSVSSS*
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