Ggra6294.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6294.t1
Unique NameGgra6294.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length480
Homology
BLAST of Ggra6294.t1 vs. uniprot
Match: A0A2V3IMI9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 607 bits (1565), Expect = 9.670e-211
Identity = 339/480 (70.62%), Postives = 388/480 (80.83%), Query Frame = 0
Query:    1 MTSRRNNGRSKAGSAPGPIAGPPESSGLAQSLPPLPTDVLNVPGDTAQAPASRGPRTNNGAPPAQGPANSAQA-AEAMSSRSDEYTLRELEAQVRVMQNSHVALIHDITKLRQRLYEADVRDVSQDVRVLRSDVNQIMEDRKESAVLHEKAADRLNRLAARLETVEHTIIHEAVAPGVPVSEGSRKSHRSKDRHAGKKRKVKLEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRATRSRATEATQGVARSRSKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSAEMTPRGTGRVKDQIKRLELTLKPNKFSGQDPILVLDFLARYVGEADVLRMSEAQAYIALPYFLKGMAEDQYNSVRGSSRASEGGVTCWPEAVQYLLRSYATGNAIQEAILALRDTKQGPEETETVYSTRLNKAFHRCGNVYSAAERCTMFVDGLVPSIRTLVARYRENKRKISYLELVQFAQAEGDAARAQ 479
            M    N GRS+ GS PG  +GPP S+GL QSLPPLP D L +PG+    PASRGPR+ N  P AQGPA+ A A A+AMSSRSDE+TLRELEAQVR++Q+S V LI DITKLR R  +ADVRDVS DVRVLR+DVN +ME RK    L ++ A+RLNRLA RLETVE TIIH+AV PG PVSEGSRK HR+ D H  +++KVK+E                   XXXXXX     RSRA+RS+ TEAT G  R+R KGRKHLGLKELKPTNLLYR+LLSYRYYRLEDSS E TPRGTGR+KD IKRLELTL+ ++F+G+DPIL+LDFLAR+V EAD+L MSEAQAYIALPYFL+GMAEDQ+NSVRGSSRA+EGGVTCWPEAVQYLLRSYATGNAIQ AILALRDT+Q  EE+ET YSTRL KAFHRCGNVYSA ERCTMFVDGL P+IRTLVAR+RE++R+I+YLELVQFAQAEGDA RA+
Sbjct:    1 MPRPSNTGRSRTGSMPG-SSGPPGSTGLPQSLPPLPRDALTMPGNDDPVPASRGPRSVNEVPEAQGPADPALAVAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVLGTLLQEVAERLNRLADRLETVEQTIIHDAVPPGAPVSEGSRKWHRAMDCH--RRKKVKMEEDLSSSSSSESDVRSHGFSXXXXXXEPNH-RSRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAEDQFNSVRGSSRATEGGVTCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRAR 476          
BLAST of Ggra6294.t1 vs. uniprot
Match: A0A2V3ICD1 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD1_9FLOR)

HSP 1 Score: 322 bits (825), Expect = 2.310e-104
Identity = 200/301 (66.45%), Postives = 227/301 (75.42%), Query Frame = 0
Query:    1 MTSRRNNGRSKAGSAPGPIAGPPESSGLAQSLPPLPTDVLNVPGDTAQAPASRGPRTNNGAPPAQGPANSAQAA-EAMSSRSDEYTLRELEAQVRVMQNSHVALIHDITKLRQRLYEADVRDVSQDVRVLRSDVNQIMEDRKESAVLHEKAADRLNRLAARLETVEHTIIHEAVAPGVPVSEGSRKSHRSKDRHAGKKRKVKLEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRATRSRATEATQGVARSRSKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSAEMTPRGTGRVKD 300
            M    N GRS+ GS PG  +GPP S+GL QSLPPLP D L +PG+    PASRGPR+ N  P AQGPA+ A AA +AMSSRSDE+TLRELEAQVR++Q+S V LI DITKLR R  +ADVRDVS DVRVLR+DVN +ME RK S  L ++ A+RLNRLAARLETVE TIIH+AV PG PVSEGSRKSHR+ DRH  +++KVK+E                  XXXXXXXXX   RSRA+RS+ TEAT G  R+R KGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSS E T RGTGRVKD
Sbjct:    1 MPRPSNTGRSRTGSVPG-SSGPPGSTGLPQSLPPLPRDALTMPGNDDPVPASRGPRSVNEVPEAQGPADPAMAAAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVSGTLLQEVAERLNRLAARLETVEQTIIHDAVPPGAPVSEGSRKSHRATDRH--RRKKVKMEEGLSSSSSSESDVRSHGSXXXXXXXXXNH-RSRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSMERTSRGTGRVKD 297          
BLAST of Ggra6294.t1 vs. uniprot
Match: A0A2V3IQB6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQB6_9FLOR)

HSP 1 Score: 145 bits (366), Expect = 4.890e-38
Identity = 89/153 (58.17%), Postives = 109/153 (71.24%), Query Frame = 0
Query:    1 MTSRRNNGRSKAGSAPGPIAGPPESSGLAQSLPPLPTDVLNVPGDTAQAPASRGPRTNNGAPPAQGPANSAQ-AAEAMSSRSDEYTLRELEAQVRVMQNSHVALIHDITKLRQRLYEADVRDVSQDVRVLRSDVNQIMEDRKESAVLHEKAAD 152
            M    N GR + GS PG  +GPP S+GL QSLPPLP D L + G+    PASRGPR+ N  P AQ  A+ A  AA+AMSSRSDE+ LRELEAQVR++Q+S V LI DITKL+ R  + DV+DVS DVRVLR+DVN++ME RK S  L ++ AD
Sbjct:    1 MPRPSNTGRCRTGSVPG-SSGPPGSTGLPQSLPPLPRDALTMLGNDDPVPASRGPRSVNEVPEAQRAADPALVAAQAMSSRSDEFNLRELEAQVRILQSSQVNLIQDITKLQTRFDDVDVQDVSNDVRVLRADVNRVMEGRKVSGTLLQEVAD 152          
BLAST of Ggra6294.t1 vs. uniprot
Match: A0A2V3IMT1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMT1_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 2.100e-28
Identity = 71/111 (63.96%), Postives = 83/111 (74.77%), Query Frame = 0
Query:    1 MTSRRNNGRSKAGSAPGPIAGPPESSGLAQSLPPLPTDVLNVPGDTAQAPASRGPRTNNGAPPAQGPANSA-QAAEAMSSRSDEYTLRELEAQVRVMQNSHVALIHDITKL 110
            M    N GRS+ GS PG  +GPP S+GL QSLPPLP D L +PG+    PASRGPR+ N  P AQGPA+ A  AA+AMSSRSDE+TLRELEAQVR++Q+S V LI DITKL
Sbjct:    1 MPRPSNTGRSRTGSVPG-SSGPPGSTGLPQSLPPLPRDALTMPGNDDPVPASRGPRSVNEVPEAQGPADLALAAAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKL 110          
BLAST of Ggra6294.t1 vs. uniprot
Match: A0A2V3IGT9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT9_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 3.830e-26
Identity = 71/138 (51.45%), Postives = 95/138 (68.84%), Query Frame = 0
Query:    3 SRRNNGRSKAGSAPGPIAGPPESSGLAQSLPPLPTDVLNVPGDTAQAPASRGPRTNNGAPPAQGPANSA-QAAEAMSSRSDEYTLRELEAQVRVMQNSHVALIHDITKLRQRLYEADVRDVSQDVRVLRSDVNQIMED 139
            SR    RS++ S PG       S GL Q+LPPLP DVL VPG   Q PAS G R++NGAPPA+G A+ A  AA A S  S++Y+L ELEAQ+R++++S VAL+ D+T LR R    DVRDV+ D R LRS+VN+++++
Sbjct:    2 SRPRKARSRSASVPG-------SYGLPQTLPPLPRDVLEVPGGDYQGPASLGARSDNGAPPARGLADPAPNAAAAPSLTSNQYSLWELEAQLRILKSSQVALLPDLTALRVRFDTFDVRDVTNDFRALRSEVNKLLDN 132          
BLAST of Ggra6294.t1 vs. uniprot
Match: A0A2V3IV52 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV52_9FLOR)

HSP 1 Score: 112 bits (280), Expect = 1.140e-25
Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 0
Query:    1 MTSRRNNGRSKAGSAPGPIAGPPESSGLAQSLPPLPTDVLNVPGDTAQAPASRGPRTNNGAPPAQGPANSAQAA--------------EAMSSRSDEYTLRELEAQVRVMQNSHVALIHDITKLRQRLYEADVRDVSQDVRVLRSDVNQIMEDRKESA 144
            M+SR   G SKA S PG       SSGL + LPPLP D+L++PG   + PA RG R++   P     + SA+                EAMSSRSDEYTLR++EA +R++QNSHV L+ ++TK+RQR  +  +  + +DVRVLRSDVNQIME R+ SA
Sbjct:    1 MSSRGRGGPSKAASVPG-------SSGLPRGLPPLPRDILDIPGRGDRNPAPRGARSD-ARPTRSSTSLSARCCGYFRFGANPAVTEGEAMSSRSDEYTLRDVEAHMRILQNSHVGLLQEMTKIRQRWLKPKLGMLQKDVRVLRSDVNQIMEHRQVSA 150          
The following BLAST results are available for this feature:
BLAST of Ggra6294.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IMI99.670e-21170.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICD12.310e-10466.45Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IQB64.890e-3858.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMT12.100e-2863.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGT93.830e-2651.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV521.140e-2547.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:452606..454161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6294.t1Ggra6294.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 452606..454161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6294.t1 ID=Ggra6294.t1|Name=Ggra6294.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=480bp
MTSRRNNGRSKAGSAPGPIAGPPESSGLAQSLPPLPTDVLNVPGDTAQAP
ASRGPRTNNGAPPAQGPANSAQAAEAMSSRSDEYTLRELEAQVRVMQNSH
VALIHDITKLRQRLYEADVRDVSQDVRVLRSDVNQIMEDRKESAVLHEKA
ADRLNRLAARLETVEHTIIHEAVAPGVPVSEGSRKSHRSKDRHAGKKRKV
KLEPDSSSSSSSESNVQVRDSSTDSSESEDEPPRSRATRSRATEATQGVA
RSRSKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSAEMTPRGTGRVKD
QIKRLELTLKPNKFSGQDPILVLDFLARYVGEADVLRMSEAQAYIALPYF
LKGMAEDQYNSVRGSSRASEGGVTCWPEAVQYLLRSYATGNAIQEAILAL
RDTKQGPEETETVYSTRLNKAFHRCGNVYSAAERCTMFVDGLVPSIRTLV
ARYRENKRKISYLELVQFAQAEGDAARAQ*
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