Ggra6300.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6300.t1
Unique Name	Ggra6300.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	353

Homology

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BLAST of Ggra6300.t1 vs. uniprot
Match: A0A2V3IMG3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG3_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 1.220e-32
Identity = 119/334 (35.63%), Postives = 169/334 (50.60%), Query Frame = 0

Query:   35 QQDNHHY-KKLYATSDTSHVADHSDTRDVSHTS-PNGF---------KRYKSMHDRRDMGADDLRRAARQSRREQDTSREQPSNANGWLTSFTKLFGIGVNEEDTENGAAIDNTDDKYETHSSQERPTHQVEPVSFKR-NFDLDPH-HPADFGSEEEIHT---SLVEPETDTEKESKVAILDDDELISKTDLQDLVRLFRRMFTTLEKELNQTKIAAQNQHQSSTSNDLNSALAQAQALNRRKELDRKRVLVQASGDDEAPEREEEDADHEQPSEFPLGSPAYESRKRIMRGLNGVVEKDRTVRRRAVRHHGRTRDDDREHFYQAISAGLLPYL 352
            + D+H+Y +K ++ SD S   D S +R   H   P+ +         KR +++ +R DM ADDL RAAR+SR   + S EQ +N  GW  SF K+ GIG+ +   E     D   D         RP    E   F+  +  ++ H HPAD G +++  T   S V    DT  +S    L  ++L S  DL+DLV LFRRMFT L+ +LN T+ A   +       D++ A+A+A   N      R++   Q    D   +  ++D D+E   E P GSPAYESRKR+MR L+ V +   T  RR         D DR+H   A+SAG LPY+
Sbjct:    5 ETDHHYYNRKPHSPSDVSRATDESRSRTNQHDMHPSEYDHPSAALTPKRVRTVSERHDMHADDLHRAARRSRNRHN-SHEQQNNNPGWFNSFAKMLGIGITDVAEEKQPIADERGDF--------RPPSHDEYTQFRHASRAVERHDHPADLGIDDDSATASGSEVATSRDTLIKSAAERLSSEDL-SGADLKDLVHLFRRMFTALDNQLNATQSAQVGRR---GLPDVSVAIAEAXXXNXXXXXXRRKAFDQ----DMESDANDDDVDNE---EMPPGSPAYESRKRLMRALSAVKDGGDTKTRRI--------DKDRDHLIDAMSAGFLPYV 310

The following BLAST results are available for this feature:

BLAST of Ggra6300.t1 vs. uniprot

BLAST of Ggra6300.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMG3	1.220e-32	35.63	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..149
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..352
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000879_pilon	contig	tig00000879_pilon:495264..496322 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6300.t1	Ggra6300.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000879_pilon 495264..496322 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6300.t1 ID=Ggra6300.t1|Name=Ggra6300.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=353bp
MKPSRTTCLTFLLTVQLIATTVASPVNEFPEIRHQQDNHHYKKLYATSDT
SHVADHSDTRDVSHTSPNGFKRYKSMHDRRDMGADDLRRAARQSRREQDT
SREQPSNANGWLTSFTKLFGIGVNEEDTENGAAIDNTDDKYETHSSQERP
THQVEPVSFKRNFDLDPHHPADFGSEEEIHTSLVEPETDTEKESKVAILD
DDELISKTDLQDLVRLFRRMFTTLEKELNQTKIAAQNQHQSSTSNDLNSA
LAQAQALNRRKELDRKRVLVQASGDDEAPEREEEDADHEQPSEFPLGSPA
YESRKRIMRGLNGVVEKDRTVRRRAVRHHGRTRDDDREHFYQAISAGLLP
YL*