Ggra9527.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9527.t1
Unique NameGgra9527.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1162
Homology
BLAST of Ggra9527.t1 vs. uniprot
Match: A0A2V3IHN8 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN8_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 1.610e-25
Identity = 107/415 (25.78%), Postives = 174/415 (41.93%), Query Frame = 0
Query:  559 LKSAKQAILKDLYAKFGNDPLTEHKLQRASRWLLEQSINKEKENYKQKGAYRAVSIRSIPRDANLIGSHHFFNVKHDGEKNVMKLKCRLVPHGNRDREKDTLRSDSSTAQFSTIH------------------------------EV---------------WKLLAPAYGLVESGRLWQLCVEEWLLDIGFVHVPGIPQLFLMWKSGELVMALAKVVDDMIFSGKPEHMRRFREDISAKFDVGR--FNRGQDIVFNRLFIKQHADFSVSLSMEEFLTTIKPIDLPHHRKKENDSACTSEELRRFQALPVKLNFLGHGILPQASIVVSKLQQNVSQLKISHIRQLSQALFYLKSLSLTLLYKSPAKPMSPSSFAAKVIGFSDAASGNTSCGQTGFLCGLSF-QSKELQVFHVLDW 925
            L   ++  + + +   G+     H+ Q    ++ E + +KE+  +K+    R V +  IP DAN I SH F+ +K   + + + LK R+ PHGN D+ K  L++DS+T     IH                              EV               W LL  AYG V +   WQ   +  L  +GF+ +  +PQLF   +   L     KVV+D++F+     +      I   F +G   F  G    F  L + Q+ ++SV++  E+   + +P  +   R+++ D      +LR F +L   + +L     P  +I  S LQQ    + + H+      L  LK       Y  P      +S+   ++ F+DA S     GQ GF+ GL F +  E  VFH + W
Sbjct:  425 LVRTEEQTVAEFFDILGSKEFMLHQAQGMPPFVTENAYSKEEIAFKK--TVREVPVSQIPDDANFIRSHVFYKIKRCDDDSFV-LKSRIAPHGNEDKGKHALKTDSATCPPVGIHILFSIASIRQWVLAKIDFKSAFLQTGFATREVCMVQPRECTSRYRFYWLLLTAAYGFVNASAKWQQLSDNLLRSLGFLQLVWVPQLFYRLQEEALTCVTVKVVEDVLFAAPRHVVEDIISLIQQDFQLGTIVFAPGT-FQFYGLTVTQYDEYSVTVHGEDKFQSFEPFPIDRTRRRKVDEPLNQLKLRAFWSLNSSIGWLSIAASPFCAIASSLLQQKGPYVAVKHLVSQFNVLCNLKKRGTCARYHRPPA----NSYPVSLLAFADA-SRTLDHGQLGFVTGLLFGEFTEGSVFHPISW 830          
BLAST of Ggra9527.t1 vs. uniprot
Match: A0A2V3IK54 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK54_9FLOR)

HSP 1 Score: 84.7 bits (208), Expect = 5.190e-14
Identity = 59/240 (24.58%), Postives = 101/240 (42.08%), Query Frame = 0
Query:  563 KQAILKDLYAKFGNDPLTEHKLQRASRWLLEQSINKEKENYKQKGAYRAVSIRSIPRDANLIGSHHFFNVKHDGEKNVMKLKCRLVPHGNRDREKDTLRSDSSTAQFSTIHEV---------------------------------------------WKLLAPAYGLVESGRLWQLCVEEWLLDIGFVHVPGIPQLFLMWKSGELVMALAKVVDDMIFSGKPEHMRRFREDISAKFDVG 757
            +Q  +++ Y  F       H+      ++ E +  +E+   K+      + I  IP  AN+I SH F+  K   + +++ LK R+ PHGN D++K +L++DS+T   + I  +                                             W LLA AYGLV +   WQ   +  L  +GF+ +  +PQLF       + MA  +VVDD++F G    + +    I   +++G
Sbjct:   50 QQNYVREFYEAFWCKEFMLHQAHGLPSFVTENAYREEEMALKK--TVLEIPISKIPEGANVINSHVFYRFKKCDDYSLV-LKARIAPHGNEDKDKLSLKTDSATCLLTGIRLLLSLALVNKWILAKIDFESAFLQTGDATRDVYVVLPRECTIRYRFYWLLLASAYGLVNASAKWQALSDNLLSSLGFIQLVYVPQLFYRINKTAVKMAAVRVVDDVLFVGPRYLIDQIISKIQRSYELG 286          
BLAST of Ggra9527.t1 vs. uniprot
Match: A0A1Q9EAZ4 (ATP-dependent zinc metalloprotease FTSH 1, chloroplastic n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EAZ4_SYMMI)

HSP 1 Score: 70.5 bits (171), Expect = 2.520e-8
Identity = 59/200 (29.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query:  669 FSTIHEVWKLLAPAYGLVESGRLWQLCVEEWLLDIGFVHVPGIPQLFLMWKSGELVMALAKVVDDMIFSGKPEHMRRFREDISAKFDVGRFNRGQDIVFNRLFI-----KQHADFSVSLSMEEFLTTIKPIDLPHHRKKENDSACTSEELRR-FQALPVKLNFLGHGIL--PQASIVVSKLQQNVSQLKISHIRQLSQAL 860
            F   HEV   L P  G  ++ + + L + +   + GFV     P+L L++K+GEL+MA+ K VDD+   G  E + RF + +S  F  G+     DI F++        +QH D S+SL   +FL   KP+  P     E       EE+RR F +L   L  + + ++  P  ++ V+ LQ+   +    H+ +++  L
Sbjct: 6565 FDPRHEVLHCLKPGTGCRDAPKCFSLKLRKATSEYGFVSSTVDPELELLFKAGELLMAVLKHVDDLKMIGPKEEIIRFVDYLSGIF--GKL----DIEFHKFTFCGVAHEQHPDGSISLDQTKFLAACKPMVAPKQAPTEE----LPEEVRRHFLSL---LMTIAYSLITRPDIAVFVTALQRESHKALYVHVTRINTLL 6751          
BLAST of Ggra9527.t1 vs. uniprot
Match: A0A812YAA8 (RE1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YAA8_9DINO)

HSP 1 Score: 67.8 bits (164), Expect = 1.590e-7
Identity = 58/200 (29.00%), Postives = 98/200 (49.00%), Query Frame = 0
Query:  669 FSTIHEVWKLLAPAYGLVESGRLWQLCVEEWLLDIGFVHVPGIPQLFLMWKSGELVMALAKVVDDMIFSGKPEHMRRFREDISAKFDVGRFNRGQDIVFNRLFI-----KQHADFSVSLSMEEFLTTIKPIDLPHHRKKENDSACTSEELRR-FQALPVKLNFLGHGIL--PQASIVVSKLQQNVSQLKISHIRQLSQAL 860
            F   HEV   L P  G  ++ + + L + +   + GFV     P+L L++K+GEL+MA+ K VDD+   G    + RF + +S  F  G+     DI F++        +QH D SVSL   +FL   KP+  P     E       E++RR F +L   L  + + ++  P  +++V+ LQ+   +    H+ +++  L
Sbjct: 2862 FDPRHEVLHCLKPGTGCRDAPKCFSLKLRKATSEYGFVSSTVDPELELLFKAGELLMAILKHVDDLKMIGPKGEIIRFVDYLSGIF--GKL----DIEFHKFTFCGVAHEQHDDGSVSLDQTKFLAACKPMIAPKLAPTEE----LPEDIRRHFLSL---LMTIAYSLITRPDIAVIVTALQRESHKALYVHVTRINTLL 3048          
BLAST of Ggra9527.t1 vs. uniprot
Match: A0A5K1K150 (Uncharacterized protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K150_9APHY)

HSP 1 Score: 63.9 bits (154), Expect = 2.110e-6
Identity = 57/230 (24.78%), Postives = 87/230 (37.83%), Query Frame = 0
Query:  575 GNDPLTEHKLQRASRW-LLEQSINKEKENYKQKGAYRAVSIRSIPRDANLIGSHHFFNVKHDGEKNVMKLKCRLVPHG----------------------------------------------NRDREKDT-LRSDSSTAQFSTIHEVWKLLAPAYGLVESGRLWQLCVEEWLLDIGFVHVPGIPQLFLMWKSGELVMALAKVVDDMIFSGKPEHMRRFREDISAKFDV 756
            G DP++  + Q A  W   E++I  E EN +  G Y  V     P  A++IGS   F+ K D +  V + K R+V  G                                              N + E++  +R    TA     H V +L    YGL ++GR W     + +  +G V        F   +   L M +  +VDDM+ +G P+ + RFR  I   F +
Sbjct:  970 GGDPMSLREAQEAPDWPQWERAIEVEMENLRVHGTYELVP---KPPGAHVIGSKLVFHRKRDAQGAVKQCKVRVVAQGFAQIPGMDFNETFAPVAKGASIRLMVTLAARFNWPMIQLDVKSAYLNGELEEEIFMRQPPGTAAPGEEHLVCRLKKSLYGLKQAGRAWYRTYRDAMTKLGMVRSEADHACFWQHEDESLAM-VGTIVDDMLVTGTPDLVERFRSGIKGHFTI 1195          
BLAST of Ggra9527.t1 vs. uniprot
Match: A0A5K1K0E1 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY)

HSP 1 Score: 63.5 bits (153), Expect = 2.320e-6
Identity = 59/231 (25.54%), Postives = 89/231 (38.53%), Query Frame = 0
Query:  575 GNDPLTEHKLQRASRW-LLEQSINKEKENYKQKGAYRAVSIRSIPRDANLIGSHHFFNVKHDGEKNVMKLKCRLVPHG----------------------------------------------NRDREKDT-LRSDSSTAQFSTIHEVWKLLAPAYGLVESGRLWQLCVEEWLLDIGFVHVPGIPQLFLMW-KSGELVMALAKVVDDMIFSGKPEHMRRFREDISAKFDV 756
            G+DPL+  + Q +  W   E++I  E EN +  G Y  V     P  A++IGS   F+ K + E  V + K R+V  G                                              N D +++  +R    TA     H V +L    YGL ++GR W     E +  +G          F  W + GE +  +  +VDDM+ +G P+ + RFR  I   F V
Sbjct:  319 GSDPLSLREAQASPDWPQWERAIEVEMENLRAHGTYDLVV---KPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAARFGWPMIQLDVKSAYLNGDLDEEIYMRQPPGTAAAGEEHLVCRLKKSLYGLKQAGRAWYKTYREAMSALGMTRSEADHACF--WQRDGESLAMVGTIVDDMLVTGTPDLVERFRGGIKTHFTV 544          
BLAST of Ggra9527.t1 vs. uniprot
Match: A0A2G8S714 (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8S714_9APHY)

HSP 1 Score: 62.4 bits (150), Expect = 6.440e-6
Identity = 56/229 (24.45%), Postives = 89/229 (38.86%), Query Frame = 0
Query:  577 DPLTEHKLQRASRWL-LEQSINKEKENYKQKGAYRAVSIRSIPRDANLIGSHHFFNVKHDGEKNVMKLKCRLVPHG----------------------------------------------NRDREKDT-LRSDSSTAQFSTIHEVWKLLAPAYGLVESGRLWQLCVEEWLLDIGFVHVPGIPQLFLMW-KSGELVMALAKVVDDMIFSGKPEHMRRFREDISAKFDV 756
            DP T  + Q A  W   E++I+ E EN K  G Y  V+    P  A++IG    F+ K D E  V + K R+V  G                                              N + +++  +R    TA     H V +L    YGL ++GR W     + +  +G          F  W ++GE +  +  +VDDM+ +G P+ + +FR  I  +F +
Sbjct: 1259 DPRTLREAQEAPDWAEWEKAISVEMENLKAHGTYELVT---KPLGAHVIGCTLVFHRKQDAEGEVTQRKVRVVAQGFAQVPGIEFDQTFAPVAKPSSLRLMIALAARFGWPMVQLDVKSAYLNGELDEEIYMRQPPGTAAPGEEHLVCRLKKSLYGLKQAGRSWYRTYRDAMTSLGMTRCESDHACF--WQRAGESLAMVGTIVDDMLVTGTPDLVEKFRVGIKKRFTI 1482          
The following BLAST results are available for this feature:
BLAST of Ggra9527.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IHN81.610e-2525.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2V3IK545.190e-1424.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1Q9EAZ42.520e-829.50ATP-dependent zinc metalloprotease FTSH 1, chlorop... [more]
A0A812YAA81.590e-729.00RE1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxI... [more]
A0A5K1K1502.110e-624.78Uncharacterized protein n=1 Tax=Ganoderma boninens... [more]
A0A5K1K0E12.320e-625.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8S7146.440e-624.45Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:455994..462531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9527.t1Ggra9527.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 455994..462531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9527.t1 ID=Ggra9527.t1|Name=Ggra9527.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1162bp
MEAGIEGECGVVLAENMNGAKGRRERDESKPWRSVVGCGVGGDGNWMGGV
VMFVVCCPSEAYAVEGDIDFVAWWDELHELYEGELLGRWSGRRKGEAKKR
DEFAHPDDGGGVGGPEGVEVFEYAGIVEVEASEAANVLDDVVVEMELGGS
KAGSVVRAEDEGVVSHGEEEKLGVLGENGSNGSCIDLVTAAVEGGADEGE
DHVDEETVESLTVVGGEKFDVESCGWGLLFDGGEDGLDELGDAEVEVMEW
FEGEDVVRREERGDVEEGRGGPFQHLGGGYSVISGHRESGSGIEEEGMEC
VGGGRSVGRYIGGMDAGAGAVGDGENVFCFWDVCGVAGDDLVTMAEHAIS
VTEGEASEAGGEKRVEEVGDGTLDELHFVEKGDVKGVGGDGGGFEGGGGL
VKVYLDEADEGVDTGVFSGVPDAGVIGRLQDCVLEGWDSFFSEGRSRGVG
ESGRAGGGCVGDVVEEGVVGVSKLLAELECIELGYTEFPQPSPDPEVVSQ
HEQPEIPTNPLVQITEEPPIMKDDLQLNSAFAEWDDHPFSSAFLTGTSAT
RPFDMPTSLKSAKQAILKDLYAKFGNDPLTEHKLQRASRWLLEQSINKEK
ENYKQKGAYRAVSIRSIPRDANLIGSHHFFNVKHDGEKNVMKLKCRLVPH
GNRDREKDTLRSDSSTAQFSTIHEVWKLLAPAYGLVESGRLWQLCVEEWL
LDIGFVHVPGIPQLFLMWKSGELVMALAKVVDDMIFSGKPEHMRRFREDI
SAKFDVGRFNRGQDIVFNRLFIKQHADFSVSLSMEEFLTTIKPIDLPHHR
KKENDSACTSEELRRFQALPVKLNFLGHGILPQASIVVSKLQQNVSQLKI
SHIRQLSQALFYLKSLSLTLLYKSPAKPMSPSSFAAKVIGFSDAASGNTS
CGQTGFLCGLSFQSKELQVFHVLDWHSSKQHRVSFSSVGPQWILLNSVQN
LATPNVNTNNVINVPCAQSYDVYAIFLCQQPPKGIAIIAPAIMDSMELNS
VREFVNPPSSIAEAQHVTETLSKHGLKRIILINNSCHSIGKRSLDAHGGR
FAIHHALLAQLESSRLFSSLAISRTRDADSNNWILQTPLIKTIENLAVVK
RHHPPCIGQGVVLLPVRNPATPQTLDGKRIRRIRATHRVELYLLPAPKRL
TVIVAIIKTAF*
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