Ggra9525.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra9525.t1
Unique Name	Ggra9525.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	1958

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000873_pilon	contig	tig00000873_pilon:444395..451302 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	7668.SPU_013848-tr
PFAMs	RVT_1,SCAN,gag-asp_proteas,rve,zf-CCHC,zf-H2C2
Max annot lvl	33208\|Metazoa
Evalue	7.55e-130
EggNOG OGs	COG2801@1\|root,KOG0017@2759\|Eukaryota,38F42@33154\|Opisthokonta,3BA5H@33208\|Metazoa,3CWAK@33213\|Bilateria
Description	K02A2.6-like
COG category	E

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9525	Ggra9525	Gracilaria gracilis GNS1m male	gene	tig00000873_pilon 444395..451302 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9525.t1	Ggra9525.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000873_pilon 444395..451302 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9525.t1.start1	Ggra9525.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000873_pilon 444395..444397 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9525.t1.CDS1	Ggra9525.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 444395..444436 +
Ggra9525.t1.CDS2	Ggra9525.t1.CDS2	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 444853..445261 +
Ggra9525.t1.CDS3	Ggra9525.t1.CDS3	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 445368..445987 +
Ggra9525.t1.CDS4	Ggra9525.t1.CDS4	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 446068..446673 +
Ggra9525.t1.CDS5	Ggra9525.t1.CDS5	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 446786..446877 +
Ggra9525.t1.CDS6	Ggra9525.t1.CDS6	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 446951..447540 +
Ggra9525.t1.CDS7	Ggra9525.t1.CDS7	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 447664..449839 +
Ggra9525.t1.CDS8	Ggra9525.t1.CDS8	Gracilaria gracilis GNS1m male	CDS	tig00000873_pilon 449964..451302 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9525.t1.exon1	Ggra9525.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 444395..444436 +
Ggra9525.t1.exon2	Ggra9525.t1.exon2	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 444853..445261 +
Ggra9525.t1.exon3	Ggra9525.t1.exon3	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 445368..445987 +
Ggra9525.t1.exon4	Ggra9525.t1.exon4	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 446068..446673 +
Ggra9525.t1.exon5	Ggra9525.t1.exon5	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 446786..446877 +
Ggra9525.t1.exon6	Ggra9525.t1.exon6	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 446951..447540 +
Ggra9525.t1.exon7	Ggra9525.t1.exon7	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 447664..449839 +
Ggra9525.t1.exon8	Ggra9525.t1.exon8	Gracilaria gracilis GNS1m male	exon	tig00000873_pilon 449964..451302 +

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9525.t1.intron1	Ggra9525.t1.intron1	Gracilaria gracilis GNS1m male	intron	tig00000873_pilon 444437..444852 +
Ggra9525.t1.intron2	Ggra9525.t1.intron2	Gracilaria gracilis GNS1m male	intron	tig00000873_pilon 445262..445367 +
Ggra9525.t1.intron3	Ggra9525.t1.intron3	Gracilaria gracilis GNS1m male	intron	tig00000873_pilon 445988..446067 +
Ggra9525.t1.intron4	Ggra9525.t1.intron4	Gracilaria gracilis GNS1m male	intron	tig00000873_pilon 446674..446785 +
Ggra9525.t1.intron5	Ggra9525.t1.intron5	Gracilaria gracilis GNS1m male	intron	tig00000873_pilon 446878..446950 +
Ggra9525.t1.intron6	Ggra9525.t1.intron6	Gracilaria gracilis GNS1m male	intron	tig00000873_pilon 447541..447663 +
Ggra9525.t1.intron7	Ggra9525.t1.intron7	Gracilaria gracilis GNS1m male	intron	tig00000873_pilon 449840..449963 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9525.t1.stop1	Ggra9525.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000873_pilon 451300..451302 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000873_pilon:444395..451302+
coding sequence from alignment at tig00000873_pilon:444395..451302+

mRNA sequence

>Ggra9525.t1 ID=Ggra9525.t1|Name=Ggra9525.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1958bp
MGTADDVMPAWEIGEYSRSNWIQLLVTVERPTRITRGSSAPPSHKGSAAA
SAAKPILDNPEKLLRQPRAGTSKDTGTQPPLAPEPNKELPTTVEDLWPQL
EDRAKALFTATVNEAMTSMDMDAVTRLVVDRAVHELSQRIPKLVETYLLT
GISAGSSAPIKPIPADSAYLQGLRQGQEGHIEMGPRDVYLPPIGGNVRKD
TKTGGPEDDSSDPEEGRRRINRKGKERRRKKGKNRGYDSDPDSSSSDTDT
GSSSDDDRKGRRKNKPNRLAKKSSKRNRKGKKKRYESSDSDSDTDTTLEV
RQPLNDLFTKAVDYRSYRLRNRFSAYTQEVAQKITKHHKKLSFQMGDTTF
TGDDPIAFYLKGQYYHLLQGRLRGNTLAVDEEGTEMLETYPEVVNFMLET
YATDEVIQEGYAEVQAYRQRSSQTEMEFSLGLWNLATRCGNFFTTSRLKS
LFADNVDKAIRSQVRDYLANNRKVDYNGLARYAQGLGDTLRHGKKPSASH
ISKDKPKRSVLELEESTTSDGDSLTRVPTGMAVHLVTAPQAQSRATFIGN
WSSTVPPTSQCVILRQVDWSAGSVYRQTIWRTDVTKYPQGSTITISGSSR
RGNTNLGEGQSRSGGAGKHRTVSVGATPNRELESPPIPERETLMVEKEES
DVPNVVCLMKYNNYKVNASVSFLNYLQVPVASVLDTGAGPNVLNARVIPD
AVLRNIPPAPTINPLMDANERPLHLRGMLTTVVQLGTLKVKLNFFVVDRL
ATDCILGTNFIDRHVKAILPESRTVAFRQGDRISILVNVSCAVPGLVMHL
ALMANGIIDNIPNQSFKVYLSNFSNHIVKLPKNTTIGIALPAPRGVFTVS
PNRLGEVATSKEGGGTDAPYPAYAPPLSTNTKMEQKIANNFKVGDQEKPM
ELDPVRNWREEVQIGAENQALRDRILSLLEEFEPMWSGRLGQIEAKEHRI
DIVPGWKPIYQQPYRAGPKARKVELNEVERMLREGVIEPANADWASPVVP
VTKKNDTRMRFCADYRRLNSMTIRDSYPIPRMDECIDSLSNAKIFTTLDA
NCGYWQVPIREEDKDKTTFACHAGLFRFTRMPSGLWNAPATFQRALDIIL
SKVKWRSALVYIDDVIIYSRTVEEHFHHVREVLNLLRESGVTLKLRKCEF
FTKEVEYLGHIISPGRLEVTPRNIQAVQEAKPPTSQTEIRSFRGLCNVYR
RFIKGFAKIAAPLNRKLLKSQFTRFECLTNEEMDAFEALKHALLTPPILA
LPKAGLRYTLDTDASDAQIGCCFMQEQENGDKLPIGYWSRALHAAEKNYT
TTEKKCLAVVWSMLMLRPYLYGERFTLRTDHDALRWILGLADASGRLARW
RLRLSEFEYDVQYRPGIKHNVADAMSRITTDGLDTEPVEDDIPCFTISTN
PDSDTLEDYWTLREEDTWFSDAIAREILALEETDVMLITREEFLREQAND
VYCRSLMDQVGMKDSNFDVDRNGFLVRRAPIDGSLQKFGAQGAAPSGAAP
GPLPKAIRTPWRKYLKLFPAAGPLEYVAIDLLGPLPKTTRGYQYIIVITD
RFSKLTRAIPLKDTKSTTLAVAFLNNWIYPYGAPLYLLTDNGSNLASKFF
EAFCNLLGIKHYFTTDYHPQTNGQVERFIRTLVSRLRHYTKEHQTGWDEL
MQPLTYAYNLQVHRATQTTPFDLILSRHPPGIVVEGDPLGQEAAGALTPS
QIQRNTLLRLRRALKYAESKLTASQKRYKEDYDRKVTQVVTATPGQYVII
DHPPKGAKPRPGDEADDEAIDRDINSKLLPKSSRPFKVVRSTDHTVTVNQ
DGVENTISIDRITVAPRTVQSKKERGETARDPQAIPLRTQPQEDGTPIEV
NDDAQGDDPDYVPPAGITIAPSEETPTPSGTDAHLNQSGETIPSQVSSEF
PVERLVGHRRTPDGLKNTVRWYGWGADGDTAEPPSAIPHHFRVSHWNRKG
EDMRNDG*

spliced messenger RNA

>Ggra9525.t1 ID=Ggra9525.t1|Name=Ggra9525.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=5874bp|location=Sequence derived from alignment at tig00000873_pilon:444395..451302+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
atgggcacagccgatgacgtcatgcccgcatgggagatcggcgaatactc
gcgaagcaattggatacaactattggtcactgtggaaagacctacaagga
ttactcgtggctctagcgcgccacctagccacaagggttctgctgcggct
tcggccgctaaacccattctggacaaccccgagaagctgcttcggcaacc
tcgggctggaacctcaaaggatacgggcactcagccaccgttggctcctg
aacctaataaggaattgccgacaacggttgaggacctttggccccaattg
gaagatcgagcgaaagctctttttaccgctacagttaatgaagctatgac
ctcaatggacatggacgccgttacccgcttggtggttgatcgagccgtgc
acgagctctctcaacgcatacctaaattggttgaaacatacctcttaacg
gggatctctgccggttcttccgcaccaatcaagccaattccggccgatag
tgcgtacctacaaggtttaaggcaaggtcaagagggccatatagagatgg
gccctcgagacgtgtacttgccacccattggaggtaacgttcgaaaggac
accaagactggtggacctgaggacgattcgtctgacccagaagaggggcg
acgaagaataaaccgcaagggtaaagaaaggaggaggaaaaagggaaaga
atcgcggctacgactctgaccccgattcctcgagctccgataccgatact
ggttcatcgtcggatgatgaccgtaaaggtagacgcaagaacaaaccgaa
caggttggcgaagaagtcgtcaaagagaaaccgtaaaggtaagaagaaac
ggtacgagtcgtccgactcggattcggacaccgatacaaccctagaggtg
cgtcagccgctgaacgatctgttcaccaaagcggttgattataggtcata
tcggttgagaaaccgattctctgcttacacccaagaggttgcgcagaaga
tcaccaagcaccataagaagctcagcttccagatgggtgatactaccttc
acaggtgatgatcccattgcgttttaccttaaaggtcaatattaccactt
gctgcaaggcaggcttcgtggaaataccctggcggttgacgaagagggaa
cagagatgttagagacgtacccagaagtggttaatttcatgttggaaact
tacgctaccgatgaggttatccaagaaggttacgctgaggtgcaggcata
tcgccagcgctccagccaaaccgaaatggaattctcgttaggcctttgga
atctggccacccgatgcggtaatttctttaccactagtaggttaaagtcg
ctttttgccgacaatgtcgacaaagcgatccgttcgcaggtacgcgacta
cctggcgaacaaccgtaaggtggactataatgggcttgcccgttatgccc
agggactaggcgacactctccgtcacggaaagaagccgtcggcgtcccat
atttcaaaggataaaccgaaacggtcagtactggagctagaagaaagcac
tacctcagacggtgattcgctcactcgcgtaccaaccgggatggcggttc
atctcgtgactgctccgcaggctcagtcacgagccacctttattggtaat
tggtcgtcgacagtaccaccaacttcgcaatgcgtgatcctcagacaggt
ggattggtctgctggctctgtttatcgccagaccatctggcgaacagatg
tgacaaaatacccccaggggtcaaccatcaccatctcaggttcatctcgt
cgaggaaacaccaatcttggagaaggacagtcccgctcaggaggagcagg
aaaacaccgaacggttagcgtaggggccacccctaaccgtgaattggaaa
gcccgccgataccggaacgggaaaccttaatggtggaaaaagaagaatca
gatgtacccaatgtggtgtgtctaatgaagtacaataactataaagttaa
tgcttcagtaagctttctcaattacctacaggttcccgttgcgtctgtac
tcgataccggcgccggtccgaatgtgctaaacgctcgcgtcatacccgat
gcggtcttgcggaacattccacctgccccgactatcaacccgctgatgga
cgctaacgagcgcccactgcacctgagaggaatgttgaccactgtggtac
aacttggaaccttgaaggtgaagctcaatttctttgtggtggatcgtctg
gcgacagactgtatcctcgggaccaactttattgacagacatgtcaaggc
aattttgccagaatcccgaacggtcgctttccgtcaaggtgatcgtattt
ccatactggtgaatgtctcatgcgcagttccaggattggtaatgcatcta
gccttgatggcaaacgggattatcgataacatccctaatcaatccttcaa
ggtgtacttgagtaactttagcaatcacattgttaaattacccaagaata
ccactattggaatagcattgccggcaccacgaggggttttcacggtctca
cctaataggttgggcgaggtcgccacctctaaggaagggggaggaacaga
tgcgccataccctgcatatgcgcccccgttatcaacaaacaccaaaatgg
aacagaagatcgccaataactttaaggttggtgatcaggaaaagcctatg
gaactggacccagtgcggaattggagagaggaagtccagatcggtgcgga
gaaccaagctctccgagaccggatcctcagtcttttagaagaatttgaac
ccatgtggtcgggacggttgggccaaattgaggctaaagagcaccgtatt
gatatcgtgcctggctggaaacccatttaccagcagccttaccgtgcagg
tccaaaagcccggaaggttgagctcaatgaggtcgagagaatgctccgtg
aaggtgtcatagaaccagcaaatgcggactgggccagccctgtggttccc
gtcacaaagaagaatgatacccgtatgcggttctgtgcagactacagaag
actgaatagtatgaccattagggattcgtacccaatacctagaatggacg
agtgtatagattcgttgagcaacgccaagatctttactacgctcgatgcc
aattgtggttattggcaggtacctatcagggaagaagacaaggacaaaac
tacgtttgcttgccacgctgggttattccgctttacgcgtatgccctctg
ggttgtggaatgccccggctacctttcagagggcgttagatataatcctt
tcgaaggtgaagtggagaagcgctctggtatacatcgacgatgtaatcat
atattccagaacggtagaggaacatttccaccatgttagggaagttttga
accttttgagggaatctggagtaacgttgaagctccgcaagtgcgaattt
ttcaccaaagaggtagaataccttggtcatatcatcagccctgggaggtt
agaagtgacgccgcggaatatccaagccgtgcaggaggcgaagccaccca
cgtcccagacggaaatccgatcctttagaggtttatgcaatgtgtaccgc
cggtttatcaagggatttgccaagatagcggctcccctcaacaggaagct
gctgaaaagtcaatttacaaggtttgaatgtcttaccaatgaggaaatgg
atgcgttcgaggcgctgaaacatgccctcttgacacctcccatcttggca
ttacccaaagctggtttacgatacacgttggatactgacgcctcggacgc
ccaaattggttgttgttttatgcaggagcaagaaaacggcgacaaactac
ctatagggtactggagccgtgctctgcacgctgcagagaagaactacaca
acaaccgaaaagaaatgtctggcagtggtctggagcatgttgatgctccg
cccgtatctatatggtgaaaggttcacgcttcgaaccgaccatgatgccc
tacggtggatactgggtctggccgacgcatcaggcagacttgcccgatgg
cggttacggctttcagagtttgagtatgacgtacagtaccgtccaggtat
caagcacaatgtcgcagatgcgatgtctcgcattaccacagatggtttgg
acaccgagccggtagaggatgatatcccatgctttaccatctctaccaac
cctgatagtgataccttagaagattactggactctacgcgaagaggatac
gtggtttagtgatgccatcgctcgggaaatactcgccctcgaggaaacag
acgtcatgctaattacccgcgaggaattcctgagagagcaagcaaacgat
gtttattgccgctctctcatggaccaagtaggtatgaaagactcgaactt
tgacgtcgaccgaaatggtttcctggtgaggcgagctcctattgatggtt
cccttcagaagttcggtgcccaaggtgctgcgccctcgggtgctgcacct
ggcccactacccaaggctatcaggacaccctggaggaaatacttgaagtt
attccctgcagcgggtcctctcgagtacgtcgcaatagaccttctgggtc
cattaccaaaaaccacaagggggtatcagtacatcatcgtaatcaccgac
aggttctcgaagctcacgcgagcgatacccttgaaggacacgaaatctac
gaccctcgcggtggcgttcttgaacaattggatctacccgtatggtgcac
cgctttatttacttaccgacaatggttcgaacttagcttcgaagttcttt
gaagctttttgtaacctcttgggtattaagcactacttcactactgacta
ccatccgcaaactaatgggcaagtggagcgctttatccgaacactggtat
ctaggctgcgacattatacgaaagaacaccaaactggttgggacgagctc
atgcagcccttgacgtatgcatataaccttcaggttcatcgagcgacgca
aactacgccgttcgatctgatactgtcaagacacccaccaggtattgttg
ttgaaggggacccattaggacaagaagccgccggagcgctcacaccgtcc
cagattcaacggaatacccttttgaggttgagacgagctctcaagtatgc
tgagagcaagctcacagcatcccagaagcggtacaaggaggactacgacc
gaaaggtaacccaagtggtaacggctacgccgggtcaatatgtcattatt
gaccaccctccgaaaggagctaagccacgaccgggtgatgaagccgatga
tgaagctattgatagagatatcaattcgaagcttcttccgaaatcatcac
gacctttcaaggtagttcggtcaaccgaccacacggtgacggtgaaccaa
gatggtgtagagaatacgatctctattgaccgaatcacggttgcacctcg
aacggttcagtccaaaaaggaacgcggagaaaccgcgcgggacccacaag
ctattcctttgaggactcagccccaagaagacgggacacccatcgaggtt
aatgatgacgcacagggtgacgacccagactacgtaccacccgcagggat
tacgattgctccttcagaggaaacacctacccctagtggtaccgatgctc
atctaaaccaaagtggtgaaacgataccatctcaggtctctagtgagttc
ccagtggaacgccttgtaggtcaccgccgtaccccagatggtctgaagaa
caccgtacgttggtatggctggggcgccgatggtgacaccgccgagccgc
cctcagccataccacaccacttcagggtaagccactggaaccgcaaggga
gaggacatgcggaatgatgggtaa

protein sequence of Ggra9525.t1

>Ggra9525.t1 ID=Ggra9525.t1|Name=Ggra9525.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1958bp
MGTADDVMPAWEIGEYSRSNWIQLLVTVERPTRITRGSSAPPSHKGSAAA
SAAKPILDNPEKLLRQPRAGTSKDTGTQPPLAPEPNKELPTTVEDLWPQL
EDRAKALFTATVNEAMTSMDMDAVTRLVVDRAVHELSQRIPKLVETYLLT
GISAGSSAPIKPIPADSAYLQGLRQGQEGHIEMGPRDVYLPPIGGNVRKD
TKTGGPEDDSSDPEEGRRRINRKGKERRRKKGKNRGYDSDPDSSSSDTDT
GSSSDDDRKGRRKNKPNRLAKKSSKRNRKGKKKRYESSDSDSDTDTTLEV
RQPLNDLFTKAVDYRSYRLRNRFSAYTQEVAQKITKHHKKLSFQMGDTTF
TGDDPIAFYLKGQYYHLLQGRLRGNTLAVDEEGTEMLETYPEVVNFMLET
YATDEVIQEGYAEVQAYRQRSSQTEMEFSLGLWNLATRCGNFFTTSRLKS
LFADNVDKAIRSQVRDYLANNRKVDYNGLARYAQGLGDTLRHGKKPSASH
ISKDKPKRSVLELEESTTSDGDSLTRVPTGMAVHLVTAPQAQSRATFIGN
WSSTVPPTSQCVILRQVDWSAGSVYRQTIWRTDVTKYPQGSTITISGSSR
RGNTNLGEGQSRSGGAGKHRTVSVGATPNRELESPPIPERETLMVEKEES
DVPNVVCLMKYNNYKVNASVSFLNYLQVPVASVLDTGAGPNVLNARVIPD
AVLRNIPPAPTINPLMDANERPLHLRGMLTTVVQLGTLKVKLNFFVVDRL
ATDCILGTNFIDRHVKAILPESRTVAFRQGDRISILVNVSCAVPGLVMHL
ALMANGIIDNIPNQSFKVYLSNFSNHIVKLPKNTTIGIALPAPRGVFTVS
PNRLGEVATSKEGGGTDAPYPAYAPPLSTNTKMEQKIANNFKVGDQEKPM
ELDPVRNWREEVQIGAENQALRDRILSLLEEFEPMWSGRLGQIEAKEHRI
DIVPGWKPIYQQPYRAGPKARKVELNEVERMLREGVIEPANADWASPVVP
VTKKNDTRMRFCADYRRLNSMTIRDSYPIPRMDECIDSLSNAKIFTTLDA
NCGYWQVPIREEDKDKTTFACHAGLFRFTRMPSGLWNAPATFQRALDIIL
SKVKWRSALVYIDDVIIYSRTVEEHFHHVREVLNLLRESGVTLKLRKCEF
FTKEVEYLGHIISPGRLEVTPRNIQAVQEAKPPTSQTEIRSFRGLCNVYR
RFIKGFAKIAAPLNRKLLKSQFTRFECLTNEEMDAFEALKHALLTPPILA
LPKAGLRYTLDTDASDAQIGCCFMQEQENGDKLPIGYWSRALHAAEKNYT
TTEKKCLAVVWSMLMLRPYLYGERFTLRTDHDALRWILGLADASGRLARW
RLRLSEFEYDVQYRPGIKHNVADAMSRITTDGLDTEPVEDDIPCFTISTN
PDSDTLEDYWTLREEDTWFSDAIAREILALEETDVMLITREEFLREQAND
VYCRSLMDQVGMKDSNFDVDRNGFLVRRAPIDGSLQKFGAQGAAPSGAAP
GPLPKAIRTPWRKYLKLFPAAGPLEYVAIDLLGPLPKTTRGYQYIIVITD
RFSKLTRAIPLKDTKSTTLAVAFLNNWIYPYGAPLYLLTDNGSNLASKFF
EAFCNLLGIKHYFTTDYHPQTNGQVERFIRTLVSRLRHYTKEHQTGWDEL
MQPLTYAYNLQVHRATQTTPFDLILSRHPPGIVVEGDPLGQEAAGALTPS
QIQRNTLLRLRRALKYAESKLTASQKRYKEDYDRKVTQVVTATPGQYVII
DHPPKGAKPRPGDEADDEAIDRDINSKLLPKSSRPFKVVRSTDHTVTVNQ
DGVENTISIDRITVAPRTVQSKKERGETARDPQAIPLRTQPQEDGTPIEV
NDDAQGDDPDYVPPAGITIAPSEETPTPSGTDAHLNQSGETIPSQVSSEF
PVERLVGHRRTPDGLKNTVRWYGWGADGDTAEPPSAIPHHFRVSHWNRKG
EDMRNDG*

mRNA from alignment at tig00000873_pilon:444395..451302+

Legend: polypeptidestart_codonCDSexonintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra9525.t1 ID=Ggra9525.t1|Name=Ggra9525.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=6908bp|location=Sequence derived from alignment at tig00000873_pilon:444395..451302+ (Gracilaria gracilis GNS1m male)
atgggcacagccgatgacgtcatgcccgcatgggagatcggcgtcggtgc
accttgtatatattgtggtgcacctcgccttccccctcgggtatcgtaaa
gtcaggcaccattagggcagtaactataccatcttggtcacttgctactc
tattactattcaggttttaccgcgcgtcgacgtctactaccgtacaccta
cacggtctagactagtttccccgccgtttgcccctgcgggtttcaggtgc
cctactaccatattggttgtgtgtttttcccctttaggttgagccctcgc
gcgctccctctaccaggcggaccccacaccttatcggtatttgtacgaca
ttttggtctcccgacttagaagtttcctggtttttgtcgtacctttactg
gtaaacagaagacattcgaaaggattctggaagttcacgcacctattcgg
tttcgtaggaatactcgcgaagcaattggatacaactattggtcactgtg
gaaagacctacaaggattactcgtggctctagcgcgccacctagccacaa
gggttctgctgcggcttcggccgctaaacccattctggacaaccccgaga
agctgcttcggcaacctcgggctggaacctcaaaggatacgggcactcag
ccaccgttggctcctgaacctaataaggaattgccgacaacggttgagga
cctttggccccaattggaagatcgagcgaaagctctttttaccgctacag
ttaatgaagctatgacctcaatggacatggacgccgttacccgcttggtg
gttgatcgagccgtgcacgagctctctcaacgcatacctaaattggttga
aacatacctcttaacgggtgcccgcgagcatatctaccgagtggttcaag
acctttttggtttccgaaggaatggcggaaacaaaaacccctggggtgaa
tatggttactcgcataccacaagggatctctgccggttcttccgcaccaa
tcaagccaattccggccgatagtgcgtacctacaaggtttaaggcaaggt
caagagggccatatagagatgggccctcgagacgtgtacttgccacccat
tggaggtaacgttcgaaaggacaccaagactggtggacctgaggacgatt
cgtctgacccagaagaggggcgacgaagaataaaccgcaagggtaaagaa
aggaggaggaaaaagggaaagaatcgcggctacgactctgaccccgattc
ctcgagctccgataccgatactggttcatcgtcggatgatgaccgtaaag
gtagacgcaagaacaaaccgaacaggttggcgaagaagtcgtcaaagaga
aaccgtaaaggtaagaagaaacggtacgagtcgtccgactcggattcgga
caccgatacaaccctagaggtgcgtcagccgctgaacgatctgttcacca
aagcggttgattataggtcatatcggttgagaaaccgattctctgcttac
acccaagaggttgcgcagaagatcaccaagcaccataagaagctcagctt
ccagatgggtgatactaccttcacaggtgatgatcccattgcggtaattg
agtttctgcagaagttcaagattgcatgtgaccaaaatgggttttccgaa
ggtgctgccatgcgttattccagttttaccttaaaggtcaatattaccac
ttgctgcaaggcaggcttcgtggaaataccctggcggttgacgaagaggg
aacagagatgttagagacgtacccagaagtggttaatttcatgttggaaa
cttacgctaccgatgaggttatccaagaaggttacgctgaggtgcaggca
tatcgccagcgctccagccaaaccgaaatggaattctcgttaggcctttg
gaatctggccacccgatgcggtaatttctttaccactagtaggttaaagt
cgctttttgccgacaatgtcgacaaagcgatccgttcgcaggtacgcgac
tacctggcgaacaaccgtaaggtggactataatgggcttgcccgttatgc
ccagggactaggcgacactctccgtcacggaaagaagccgtcggcgtccc
atatttcaaaggataaaccgaaacggtcagtactggagctagaagaaagc
actacctcagacggtgattcgctcactcgcgtaccaaccgggatggcggt
tcatctcgtgactgctccgcaggctcagtcacgagccacctttattggta
attggtcgtcgacagtaccaccaacttcggtaaggtcgccaccaagtgcg
gcgagcactcagcaaacctcaacgggtggttcgcaagtatcttcatatgc
cacagcaccgaccaatccgtttacccgacctacctctatagcaatgcgtg
atcctcagacaggtggattggtctgctggctctgtttatcgccagaccat
ctggcgaacagatgtgacaaaatacccccaggggtgcgcgaacatctgat
tagtgccaggcagcaaaaccaccgtaacctatatggatctggaaagaggg
tacaaggtcaaccatcaccatctcaggttcatctcgtcgaggaaacacca
atcttggagaaggacagtcccgctcaggaggagcaggaaaacaccgaacg
gttagcgtaggggccacccctaaccgtgaattggaaagcccgccgatacc
ggaacgggaaaccttaatggtggaaaaagaagaatcagatgtacccaatg
tggtgtgtctaatgaagtacaataactataaagttaatgcttcagtaagc
tttctcaattacctacaggttcccgttgcgtctgtactcgataccggcgc
cggtccgaatgtgctaaacgctcgcgtcatacccgatgcggtcttgcgga
acattccacctgccccgactatcaacccgctgatggacgctaacgagcgc
ccactgcacctgagaggaatgttgaccactgtggtacaacttggaacctt
gaaggtgaagctcaatttctttgtggtggatcgtctggcgacagactgta
tcctcgggaccaactttattgacagacatgtcaaggcaattttgccagaa
tcccgaacggtcgctttccgtcaaggtgatcgtatttccatactgggtaa
tacgcataccaaaaatggttagcgtcagaagccgaggtccaatataccca
ccgaaacggtttcaaacaagatacggctcaccagattggtttcaatcccg
gctatgacccaaatggtagtgaatgtctcatgcgcagttccaggattggt
aatgcatctagccttgatggcaaacgggattatcgataacatccctaatc
aatccttcaaggtgtacttgagtaactttagcaatcacattgttaaatta
cccaagaataccactattggaatagcattgccggcaccacgaggggtttt
cacggtctcacctaataggttgggcgaggtcgccacctctaaggaagggg
gaggaacagatgcgccataccctgcatatgcgcccccgttatcaacaaac
accaaaatggaacagaagatcgccaataactttaaggttggtgatcagga
aaagcctatggaactggacccagtgcggaattggagagaggaagtccaga
tcggtgcggagaaccaagctctccgagaccggatcctcagtcttttagaa
gaatttgaacccatgtggtcgggacggttgggccaaattgaggctaaaga
gcaccgtattgatatcgtgcctggctggaaacccatttaccagcagcctt
accgtgcaggtccaaaagcccggaaggttgagctcaatgaggtcgagaga
atgctccgtgaaggtgtcatagaaccagcaaatgcggactgggccagccc
tgtggttcccgtcacaaagaagaatgatacccgtatgcggttctgtgcag
actacagaagactgaatagtatgaccattagggattcgtacccaatacct
agaatggacgagtgtatagattcgttgagcaacgccaagatctttactac
gctcgatgccaattgtggttattggcaggtacctatcagggaagaagaca
aggacaaaactacgtttgcttgccacgctgggttattccgctttacgcgt
atgccctctgggttgtggaatgccccggctacctttcagagggcgttaga
tataatcctttcgaaggtgaagtggagaagcgctctggtatacatcgacg
atgtaatcatatattccagaacggtagaggaacatttccaccatgttagg
gaagttttgaaccttttgagggaatctggagtaacgttgaagctccgcaa
gtgcgaatttttcaccaaagaggtagaataccttggtcatatcatcagcc
ctgggaggttagaagtgacgccgcggaatatccaagccgtgcaggaggcg
aagccacccacgtcccagacggaaatccgatcctttagaggtttatgcaa
tgtgtaccgccggtttatcaagggatttgccaagatagcggctcccctca
acaggaagctgctgaaaagtcaatttacaaggtttgaatgtcttaccaat
gaggaaatggatgcgttcgaggcgctgaaacatgccctcttgacacctcc
catcttggcattacccaaagctggtttacgatacacgttggatactgacg
cctcggacgcccaaattggttgttgttttatgcaggagcaagaaaacggc
gacaaactacctatagggtactggagccgtgctctgcacgctgcagagaa
gaactacacaacaaccgaaaagaaatgtctggcagtggtctggagcatgt
tgatgctccgcccgtatctatatggtgaaaggttcacgcttcgaaccgac
catgatgccctacggtggatactgggtctggccgacgcatcaggcagact
tgcccgatggcggttacggctttcagagtttgagtatgacgtacagtacc
gtccaggtatcaagcacaatgtcgcagatgcgatgtctcgcattaccaca
gatggtttggacaccgagccggtagaggatgatatcccatgctttaccat
ctctaccaaccctgatagtgataccttagaagattactggactctacgcg
aagaggatacgtggtttagtgatgccatcgctcgggaaatactcgccctc
gaggaaacagacgtcatgctaattacccgcgaggaattcctgagagagca
agcaaacgatgtttattgccgctctctcatggaccaagtaggtatgaaag
actcgaactttgacgtcgaccgaaatggtttcctggtgaggcgagctcct
attgatggttcccttcagaagttcggtgcccaaggtgctgcgccctcggg
tgctgcacctggcccactacccaaggctatcaggacaccctggaggtacg
agaatgtactacaccttgaggcaagggtactactggcctcatatggctaa
tgatatatatacctttgtaggtcaatttgaatcttgcgtacgtacccgtg
gaggtctccggaagcacaggaaatacttgaagttattccctgcagcgggt
cctctcgagtacgtcgcaatagaccttctgggtccattaccaaaaaccac
aagggggtatcagtacatcatcgtaatcaccgacaggttctcgaagctca
cgcgagcgatacccttgaaggacacgaaatctacgaccctcgcggtggcg
ttcttgaacaattggatctacccgtatggtgcaccgctttatttacttac
cgacaatggttcgaacttagcttcgaagttctttgaagctttttgtaacc
tcttgggtattaagcactacttcactactgactaccatccgcaaactaat
gggcaagtggagcgctttatccgaacactggtatctaggctgcgacatta
tacgaaagaacaccaaactggttgggacgagctcatgcagcccttgacgt
atgcatataaccttcaggttcatcgagcgacgcaaactacgccgttcgat
ctgatactgtcaagacacccaccaggtattgttgttgaaggggacccatt
aggacaagaagccgccggagcgctcacaccgtcccagattcaacggaata
cccttttgaggttgagacgagctctcaagtatgctgagagcaagctcaca
gcatcccagaagcggtacaaggaggactacgaccgaaaggtaacccaagt
ggtaacggctacgccgggtcaatatgtcattattgaccaccctccgaaag
gagctaagccacgaccgggtgatgaagccgatgatgaagctattgataga
gatatcaattcgaagcttcttccgaaatcatcacgacctttcaaggtagt
tcggtcaaccgaccacacggtgacggtgaaccaagatggtgtagagaata
cgatctctattgaccgaatcacggttgcacctcgaacggttcagtccaaa
aaggaacgcggagaaaccgcgcgggacccacaagctattcctttgaggac
tcagccccaagaagacgggacacccatcgaggttaatgatgacgcacagg
gtgacgacccagactacgtaccacccgcagggattacgattgctccttca
gaggaaacacctacccctagtggtaccgatgctcatctaaaccaaagtgg
tgaaacgataccatctcaggtctctagtgagttcccagtggaacgccttg
taggtcaccgccgtaccccagatggtctgaagaacaccgtacgttggtat
ggctggggcgccgatggtgacaccgccgagccgccctcagccataccaca
ccacttcagggtaagccactggaaccgcaagggagaggacatgcggaatg
atgggtaa

Coding sequence (CDS) from alignment at tig00000873_pilon:444395..451302+

>Ggra9525.t1 ID=Ggra9525.t1|Name=Ggra9525.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=5874bp|location=Sequence derived from alignment at tig00000873_pilon:444395..451302+ (Gracilaria gracilis GNS1m male)
atgggcacagccgatgacgtcatgcccgcatgggagatcggcgaatactc
gcgaagcaattggatacaactattggtcactgtggaaagacctacaagga
ttactcgtggctctagcgcgccacctagccacaagggttctgctgcggct
tcggccgctaaacccattctggacaaccccgagaagctgcttcggcaacc
tcgggctggaacctcaaaggatacgggcactcagccaccgttggctcctg
aacctaataaggaattgccgacaacggttgaggacctttggccccaattg
gaagatcgagcgaaagctctttttaccgctacagttaatgaagctatgac
ctcaatggacatggacgccgttacccgcttggtggttgatcgagccgtgc
acgagctctctcaacgcatacctaaattggttgaaacatacctcttaacg
gggatctctgccggttcttccgcaccaatcaagccaattccggccgatag
tgcgtacctacaaggtttaaggcaaggtcaagagggccatatagagatgg
gccctcgagacgtgtacttgccacccattggaggtaacgttcgaaaggac
accaagactggtggacctgaggacgattcgtctgacccagaagaggggcg
acgaagaataaaccgcaagggtaaagaaaggaggaggaaaaagggaaaga
atcgcggctacgactctgaccccgattcctcgagctccgataccgatact
ggttcatcgtcggatgatgaccgtaaaggtagacgcaagaacaaaccgaa
caggttggcgaagaagtcgtcaaagagaaaccgtaaaggtaagaagaaac
ggtacgagtcgtccgactcggattcggacaccgatacaaccctagaggtg
cgtcagccgctgaacgatctgttcaccaaagcggttgattataggtcata
tcggttgagaaaccgattctctgcttacacccaagaggttgcgcagaaga
tcaccaagcaccataagaagctcagcttccagatgggtgatactaccttc
acaggtgatgatcccattgcgttttaccttaaaggtcaatattaccactt
gctgcaaggcaggcttcgtggaaataccctggcggttgacgaagagggaa
cagagatgttagagacgtacccagaagtggttaatttcatgttggaaact
tacgctaccgatgaggttatccaagaaggttacgctgaggtgcaggcata
tcgccagcgctccagccaaaccgaaatggaattctcgttaggcctttgga
atctggccacccgatgcggtaatttctttaccactagtaggttaaagtcg
ctttttgccgacaatgtcgacaaagcgatccgttcgcaggtacgcgacta
cctggcgaacaaccgtaaggtggactataatgggcttgcccgttatgccc
agggactaggcgacactctccgtcacggaaagaagccgtcggcgtcccat
atttcaaaggataaaccgaaacggtcagtactggagctagaagaaagcac
tacctcagacggtgattcgctcactcgcgtaccaaccgggatggcggttc
atctcgtgactgctccgcaggctcagtcacgagccacctttattggtaat
tggtcgtcgacagtaccaccaacttcgcaatgcgtgatcctcagacaggt
ggattggtctgctggctctgtttatcgccagaccatctggcgaacagatg
tgacaaaatacccccaggggtcaaccatcaccatctcaggttcatctcgt
cgaggaaacaccaatcttggagaaggacagtcccgctcaggaggagcagg
aaaacaccgaacggttagcgtaggggccacccctaaccgtgaattggaaa
gcccgccgataccggaacgggaaaccttaatggtggaaaaagaagaatca
gatgtacccaatgtggtgtgtctaatgaagtacaataactataaagttaa
tgcttcagtaagctttctcaattacctacaggttcccgttgcgtctgtac
tcgataccggcgccggtccgaatgtgctaaacgctcgcgtcatacccgat
gcggtcttgcggaacattccacctgccccgactatcaacccgctgatgga
cgctaacgagcgcccactgcacctgagaggaatgttgaccactgtggtac
aacttggaaccttgaaggtgaagctcaatttctttgtggtggatcgtctg
gcgacagactgtatcctcgggaccaactttattgacagacatgtcaaggc
aattttgccagaatcccgaacggtcgctttccgtcaaggtgatcgtattt
ccatactggtgaatgtctcatgcgcagttccaggattggtaatgcatcta
gccttgatggcaaacgggattatcgataacatccctaatcaatccttcaa
ggtgtacttgagtaactttagcaatcacattgttaaattacccaagaata
ccactattggaatagcattgccggcaccacgaggggttttcacggtctca
cctaataggttgggcgaggtcgccacctctaaggaagggggaggaacaga
tgcgccataccctgcatatgcgcccccgttatcaacaaacaccaaaatgg
aacagaagatcgccaataactttaaggttggtgatcaggaaaagcctatg
gaactggacccagtgcggaattggagagaggaagtccagatcggtgcgga
gaaccaagctctccgagaccggatcctcagtcttttagaagaatttgaac
ccatgtggtcgggacggttgggccaaattgaggctaaagagcaccgtatt
gatatcgtgcctggctggaaacccatttaccagcagccttaccgtgcagg
tccaaaagcccggaaggttgagctcaatgaggtcgagagaatgctccgtg
aaggtgtcatagaaccagcaaatgcggactgggccagccctgtggttccc
gtcacaaagaagaatgatacccgtatgcggttctgtgcagactacagaag
actgaatagtatgaccattagggattcgtacccaatacctagaatggacg
agtgtatagattcgttgagcaacgccaagatctttactacgctcgatgcc
aattgtggttattggcaggtacctatcagggaagaagacaaggacaaaac
tacgtttgcttgccacgctgggttattccgctttacgcgtatgccctctg
ggttgtggaatgccccggctacctttcagagggcgttagatataatcctt
tcgaaggtgaagtggagaagcgctctggtatacatcgacgatgtaatcat
atattccagaacggtagaggaacatttccaccatgttagggaagttttga
accttttgagggaatctggagtaacgttgaagctccgcaagtgcgaattt
ttcaccaaagaggtagaataccttggtcatatcatcagccctgggaggtt
agaagtgacgccgcggaatatccaagccgtgcaggaggcgaagccaccca
cgtcccagacggaaatccgatcctttagaggtttatgcaatgtgtaccgc
cggtttatcaagggatttgccaagatagcggctcccctcaacaggaagct
gctgaaaagtcaatttacaaggtttgaatgtcttaccaatgaggaaatgg
atgcgttcgaggcgctgaaacatgccctcttgacacctcccatcttggca
ttacccaaagctggtttacgatacacgttggatactgacgcctcggacgc
ccaaattggttgttgttttatgcaggagcaagaaaacggcgacaaactac
ctatagggtactggagccgtgctctgcacgctgcagagaagaactacaca
acaaccgaaaagaaatgtctggcagtggtctggagcatgttgatgctccg
cccgtatctatatggtgaaaggttcacgcttcgaaccgaccatgatgccc
tacggtggatactgggtctggccgacgcatcaggcagacttgcccgatgg
cggttacggctttcagagtttgagtatgacgtacagtaccgtccaggtat
caagcacaatgtcgcagatgcgatgtctcgcattaccacagatggtttgg
acaccgagccggtagaggatgatatcccatgctttaccatctctaccaac
cctgatagtgataccttagaagattactggactctacgcgaagaggatac
gtggtttagtgatgccatcgctcgggaaatactcgccctcgaggaaacag
acgtcatgctaattacccgcgaggaattcctgagagagcaagcaaacgat
gtttattgccgctctctcatggaccaagtaggtatgaaagactcgaactt
tgacgtcgaccgaaatggtttcctggtgaggcgagctcctattgatggtt
cccttcagaagttcggtgcccaaggtgctgcgccctcgggtgctgcacct
ggcccactacccaaggctatcaggacaccctggaggaaatacttgaagtt
attccctgcagcgggtcctctcgagtacgtcgcaatagaccttctgggtc
cattaccaaaaaccacaagggggtatcagtacatcatcgtaatcaccgac
aggttctcgaagctcacgcgagcgatacccttgaaggacacgaaatctac
gaccctcgcggtggcgttcttgaacaattggatctacccgtatggtgcac
cgctttatttacttaccgacaatggttcgaacttagcttcgaagttcttt
gaagctttttgtaacctcttgggtattaagcactacttcactactgacta
ccatccgcaaactaatgggcaagtggagcgctttatccgaacactggtat
ctaggctgcgacattatacgaaagaacaccaaactggttgggacgagctc
atgcagcccttgacgtatgcatataaccttcaggttcatcgagcgacgca
aactacgccgttcgatctgatactgtcaagacacccaccaggtattgttg
ttgaaggggacccattaggacaagaagccgccggagcgctcacaccgtcc
cagattcaacggaatacccttttgaggttgagacgagctctcaagtatgc
tgagagcaagctcacagcatcccagaagcggtacaaggaggactacgacc
gaaaggtaacccaagtggtaacggctacgccgggtcaatatgtcattatt
gaccaccctccgaaaggagctaagccacgaccgggtgatgaagccgatga
tgaagctattgatagagatatcaattcgaagcttcttccgaaatcatcac
gacctttcaaggtagttcggtcaaccgaccacacggtgacggtgaaccaa
gatggtgtagagaatacgatctctattgaccgaatcacggttgcacctcg
aacggttcagtccaaaaaggaacgcggagaaaccgcgcgggacccacaag
ctattcctttgaggactcagccccaagaagacgggacacccatcgaggtt
aatgatgacgcacagggtgacgacccagactacgtaccacccgcagggat
tacgattgctccttcagaggaaacacctacccctagtggtaccgatgctc
atctaaaccaaagtggtgaaacgataccatctcaggtctctagtgagttc
ccagtggaacgccttgtaggtcaccgccgtaccccagatggtctgaagaa
caccgtacgttggtatggctggggcgccgatggtgacaccgccgagccgc
cctcagccataccacaccacttcagggtaagccactggaaccgcaaggga
gaggacatgcggaatgatgggtaa