Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra1021.t1.start1 | Ggra1021.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000027_pilon 607231..607233 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra1021.t1.stop1 | Ggra1021.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000027_pilon 608938..608940 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1021.t1 ID=Ggra1021.t1|Name=Ggra1021.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=570bp
MSNGSQKPWGPIRLLNDVQRGLENLFVNYMSADPPLEGNALLDAIREDIG
AMQFVNPDLVSNYEIHKRIRTFLEARSVIIAQNAETGRLVGKRVIAAIWC
DEEHQTVRKRAMDYFDGIRNGEIYLFSPKSPVSPTQIPFRLQDPAEPTVG
PSSSPAAAPTEEQYENKRCSFFASRYGNRHDKFKGQLEEDWTDHISTFMD
YCSDQKIVADDRMTYLHYSLHGDALKFFKSEVRDKIRSWGAVVSAFNDRY
SSLTCREDISGKLRLFRLRQFMKNNETPREALDSLIKEIDRLTPMAHVED
RTDRSKRIFLTSAVQGIHWARPILSHANAARLTYREVMDGLFSSEMNHRQ
FVQEQKGSAQSNHADGDDIQYRPRLRSSNVNFSCDDEEQVPNSVHFTGQG
RYGREPSSRTSFKPAAGHPSQPRRYMPGQQFRKRLEVPLALKVCFNCERN
GCRLFTCPKPRNEALIRKNKQFARDWLRRNRTKGVNLVQDVDDSDFAAQC
LETLCVEDDFSPNDSHPFVEGGNTYDDPRNISDAYHSTVHPVLLHNSIAL
EQGRCVSETPEDVESDQGF* back to topspliced messenger RNA >Ggra1021.t1 ID=Ggra1021.t1|Name=Ggra1021.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1710bp|location=Sequence derived from alignment at tig00000027_pilon:607231..608940+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCTAACGGTTCGCAGAAGCCCTGGGGACCAATTCGTCTTCTTAATGA
CGTACAAAGAGGACTCGAAAACCTCTTTGTGAACTACATGTCTGCGGACC
CTCCTTTGGAAGGCAATGCGTTACTTGACGCTATCCGTGAAGACATTGGA
GCTATGCAGTTTGTGAACCCGGATCTAGTTAGCAACTACGAGATTCACAA
GCGAATCAGGACTTTCCTCGAAGCTCGTTCTGTGATCATCGCGCAGAACG
CGGAAACGGGACGCCTGGTAGGTAAACGTGTTATTGCGGCTATTTGGTGT
GATGAAGAGCATCAGACCGTCCGAAAGAGAGCTATGGACTACTTTGACGG
GATTCGCAATGGCGAAATCTATCTTTTCTCTCCGAAATCCCCGGTAAGCC
CGACGCAAATCCCGTTCCGCCTTCAGGACCCCGCGGAGCCCACCGTCGGA
CCTAGTTCCAGCCCAGCAGCAGCTCCTACTGAGGAACAGTATGAAAACAA
GAGATGCTCTTTTTTCGCTTCTCGTTACGGCAACCGACACGATAAGTTCA
AAGGTCAACTTGAGGAAGACTGGACAGATCATATATCTACGTTCATGGAC
TACTGCTCTGATCAGAAGATCGTAGCTGATGATCGCATGACTTACTTGCA
CTATTCCCTTCATGGAGATGCACTCAAATTCTTTAAATCGGAAGTTCGTG
ACAAGATCAGATCTTGGGGAGCTGTCGTAAGTGCATTCAACGACCGCTAC
TCATCCCTGACCTGTCGAGAAGATATCTCTGGGAAACTGCGATTATTCAG
GCTACGCCAATTCATGAAGAACAATGAGACTCCTCGAGAAGCATTGGATA
GTCTCATCAAAGAGATAGACAGGCTTACTCCCATGGCTCATGTGGAAGAC
AGGACGGACCGATCGAAACGTATATTTCTCACCAGCGCCGTACAGGGGAT
ACATTGGGCTCGTCCTATTCTGTCACACGCAAATGCGGCAAGATTGACAT
ACCGCGAGGTAATGGATGGCCTTTTCAGTTCCGAAATGAATCACCGCCAG
TTTGTCCAAGAGCAGAAAGGATCGGCTCAAAGTAATCACGCAGATGGTGA
TGACATACAGTATCGTCCTCGATTGAGGAGCTCCAATGTCAACTTCTCTT
GTGACGATGAGGAACAAGTACCGAACTCCGTACATTTTACTGGACAAGGT
CGCTATGGTCGCGAACCCTCTAGCCGTACATCTTTCAAACCAGCAGCTGG
CCATCCTTCTCAGCCCAGACGGTATATGCCTGGTCAACAATTTCGAAAAC
GTTTAGAAGTACCACTAGCCCTGAAGGTCTGTTTCAACTGTGAACGGAAC
GGGTGTCGTTTATTCACGTGTCCCAAGCCCCGCAATGAAGCTCTCATTCG
CAAAAACAAACAATTTGCTCGAGATTGGCTTCGGCGTAACCGCACCAAAG
GCGTTAATCTGGTCCAAGATGTGGACGATTCCGACTTCGCTGCTCAATGC
CTGGAAACCCTCTGTGTCGAAGATGATTTCTCACCCAATGATTCTCACCC
CTTTGTGGAAGGCGGCAATACTTACGACGATCCACGCAATATATCAGATG
CCTATCACTCCACCGTACACCCCGTCCTACTCCATAATTCAATCGCTTTG
GAACAAGGGAGATGCGTTTCAGAAACTCCTGAAGACGTCGAGAGTGACCA
GGGTTTCTGA back to topprotein sequence of Ggra1021.t1 >Ggra1021.t1 ID=Ggra1021.t1|Name=Ggra1021.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=570bp
MSNGSQKPWGPIRLLNDVQRGLENLFVNYMSADPPLEGNALLDAIREDIG
AMQFVNPDLVSNYEIHKRIRTFLEARSVIIAQNAETGRLVGKRVIAAIWC
DEEHQTVRKRAMDYFDGIRNGEIYLFSPKSPVSPTQIPFRLQDPAEPTVG
PSSSPAAAPTEEQYENKRCSFFASRYGNRHDKFKGQLEEDWTDHISTFMD
YCSDQKIVADDRMTYLHYSLHGDALKFFKSEVRDKIRSWGAVVSAFNDRY
SSLTCREDISGKLRLFRLRQFMKNNETPREALDSLIKEIDRLTPMAHVED
RTDRSKRIFLTSAVQGIHWARPILSHANAARLTYREVMDGLFSSEMNHRQ
FVQEQKGSAQSNHADGDDIQYRPRLRSSNVNFSCDDEEQVPNSVHFTGQG
RYGREPSSRTSFKPAAGHPSQPRRYMPGQQFRKRLEVPLALKVCFNCERN
GCRLFTCPKPRNEALIRKNKQFARDWLRRNRTKGVNLVQDVDDSDFAAQC
LETLCVEDDFSPNDSHPFVEGGNTYDDPRNISDAYHSTVHPVLLHNSIAL
EQGRCVSETPEDVESDQGF* back to topmRNA from alignment at tig00000027_pilon:607231..608940+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1021.t1 ID=Ggra1021.t1|Name=Ggra1021.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1710bp|location=Sequence derived from alignment at tig00000027_pilon:607231..608940+ (Gracilaria gracilis GNS1m male)
ATGTCTAACGGTTCGCAGAAGCCCTGGGGACCAATTCGTCTTCTTAATGA
CGTACAAAGAGGACTCGAAAACCTCTTTGTGAACTACATGTCTGCGGACC
CTCCTTTGGAAGGCAATGCGTTACTTGACGCTATCCGTGAAGACATTGGA
GCTATGCAGTTTGTGAACCCGGATCTAGTTAGCAACTACGAGATTCACAA
GCGAATCAGGACTTTCCTCGAAGCTCGTTCTGTGATCATCGCGCAGAACG
CGGAAACGGGACGCCTGGTAGGTAAACGTGTTATTGCGGCTATTTGGTGT
GATGAAGAGCATCAGACCGTCCGAAAGAGAGCTATGGACTACTTTGACGG
GATTCGCAATGGCGAAATCTATCTTTTCTCTCCGAAATCCCCGGTAAGCC
CGACGCAAATCCCGTTCCGCCTTCAGGACCCCGCGGAGCCCACCGTCGGA
CCTAGTTCCAGCCCAGCAGCAGCTCCTACTGAGGAACAGTATGAAAACAA
GAGATGCTCTTTTTTCGCTTCTCGTTACGGCAACCGACACGATAAGTTCA
AAGGTCAACTTGAGGAAGACTGGACAGATCATATATCTACGTTCATGGAC
TACTGCTCTGATCAGAAGATCGTAGCTGATGATCGCATGACTTACTTGCA
CTATTCCCTTCATGGAGATGCACTCAAATTCTTTAAATCGGAAGTTCGTG
ACAAGATCAGATCTTGGGGAGCTGTCGTAAGTGCATTCAACGACCGCTAC
TCATCCCTGACCTGTCGAGAAGATATCTCTGGGAAACTGCGATTATTCAG
GCTACGCCAATTCATGAAGAACAATGAGACTCCTCGAGAAGCATTGGATA
GTCTCATCAAAGAGATAGACAGGCTTACTCCCATGGCTCATGTGGAAGAC
AGGACGGACCGATCGAAACGTATATTTCTCACCAGCGCCGTACAGGGGAT
ACATTGGGCTCGTCCTATTCTGTCACACGCAAATGCGGCAAGATTGACAT
ACCGCGAGGTAATGGATGGCCTTTTCAGTTCCGAAATGAATCACCGCCAG
TTTGTCCAAGAGCAGAAAGGATCGGCTCAAAGTAATCACGCAGATGGTGA
TGACATACAGTATCGTCCTCGATTGAGGAGCTCCAATGTCAACTTCTCTT
GTGACGATGAGGAACAAGTACCGAACTCCGTACATTTTACTGGACAAGGT
CGCTATGGTCGCGAACCCTCTAGCCGTACATCTTTCAAACCAGCAGCTGG
CCATCCTTCTCAGCCCAGACGGTATATGCCTGGTCAACAATTTCGAAAAC
GTTTAGAAGTACCACTAGCCCTGAAGGTCTGTTTCAACTGTGAACGGAAC
GGGTGTCGTTTATTCACGTGTCCCAAGCCCCGCAATGAAGCTCTCATTCG
CAAAAACAAACAATTTGCTCGAGATTGGCTTCGGCGTAACCGCACCAAAG
GCGTTAATCTGGTCCAAGATGTGGACGATTCCGACTTCGCTGCTCAATGC
CTGGAAACCCTCTGTGTCGAAGATGATTTCTCACCCAATGATTCTCACCC
CTTTGTGGAAGGCGGCAATACTTACGACGATCCACGCAATATATCAGATG
CCTATCACTCCACCGTACACCCCGTCCTACTCCATAATTCAATCGCTTTG
GAACAAGGGAGATGCGTTTCAGAAACTCCTGAAGACGTCGAGAGTGACCA
GGGTTTCTGA back to topCoding sequence (CDS) from alignment at tig00000027_pilon:607231..608940+ >Ggra1021.t1 ID=Ggra1021.t1|Name=Ggra1021.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1710bp|location=Sequence derived from alignment at tig00000027_pilon:607231..608940+ (Gracilaria gracilis GNS1m male)
ATGTCTAACGGTTCGCAGAAGCCCTGGGGACCAATTCGTCTTCTTAATGA
CGTACAAAGAGGACTCGAAAACCTCTTTGTGAACTACATGTCTGCGGACC
CTCCTTTGGAAGGCAATGCGTTACTTGACGCTATCCGTGAAGACATTGGA
GCTATGCAGTTTGTGAACCCGGATCTAGTTAGCAACTACGAGATTCACAA
GCGAATCAGGACTTTCCTCGAAGCTCGTTCTGTGATCATCGCGCAGAACG
CGGAAACGGGACGCCTGGTAGGTAAACGTGTTATTGCGGCTATTTGGTGT
GATGAAGAGCATCAGACCGTCCGAAAGAGAGCTATGGACTACTTTGACGG
GATTCGCAATGGCGAAATCTATCTTTTCTCTCCGAAATCCCCGGTAAGCC
CGACGCAAATCCCGTTCCGCCTTCAGGACCCCGCGGAGCCCACCGTCGGA
CCTAGTTCCAGCCCAGCAGCAGCTCCTACTGAGGAACAGTATGAAAACAA
GAGATGCTCTTTTTTCGCTTCTCGTTACGGCAACCGACACGATAAGTTCA
AAGGTCAACTTGAGGAAGACTGGACAGATCATATATCTACGTTCATGGAC
TACTGCTCTGATCAGAAGATCGTAGCTGATGATCGCATGACTTACTTGCA
CTATTCCCTTCATGGAGATGCACTCAAATTCTTTAAATCGGAAGTTCGTG
ACAAGATCAGATCTTGGGGAGCTGTCGTAAGTGCATTCAACGACCGCTAC
TCATCCCTGACCTGTCGAGAAGATATCTCTGGGAAACTGCGATTATTCAG
GCTACGCCAATTCATGAAGAACAATGAGACTCCTCGAGAAGCATTGGATA
GTCTCATCAAAGAGATAGACAGGCTTACTCCCATGGCTCATGTGGAAGAC
AGGACGGACCGATCGAAACGTATATTTCTCACCAGCGCCGTACAGGGGAT
ACATTGGGCTCGTCCTATTCTGTCACACGCAAATGCGGCAAGATTGACAT
ACCGCGAGGTAATGGATGGCCTTTTCAGTTCCGAAATGAATCACCGCCAG
TTTGTCCAAGAGCAGAAAGGATCGGCTCAAAGTAATCACGCAGATGGTGA
TGACATACAGTATCGTCCTCGATTGAGGAGCTCCAATGTCAACTTCTCTT
GTGACGATGAGGAACAAGTACCGAACTCCGTACATTTTACTGGACAAGGT
CGCTATGGTCGCGAACCCTCTAGCCGTACATCTTTCAAACCAGCAGCTGG
CCATCCTTCTCAGCCCAGACGGTATATGCCTGGTCAACAATTTCGAAAAC
GTTTAGAAGTACCACTAGCCCTGAAGGTCTGTTTCAACTGTGAACGGAAC
GGGTGTCGTTTATTCACGTGTCCCAAGCCCCGCAATGAAGCTCTCATTCG
CAAAAACAAACAATTTGCTCGAGATTGGCTTCGGCGTAACCGCACCAAAG
GCGTTAATCTGGTCCAAGATGTGGACGATTCCGACTTCGCTGCTCAATGC
CTGGAAACCCTCTGTGTCGAAGATGATTTCTCACCCAATGATTCTCACCC
CTTTGTGGAAGGCGGCAATACTTACGACGATCCACGCAATATATCAGATG
CCTATCACTCCACCGTACACCCCGTCCTACTCCATAATTCAATCGCTTTG
GAACAAGGGAGATGCGTTTCAGAAACTCCTGAAGACGTCGAGAGTGACCA
GGGTTTCTGA back to top
|