Ggra9523.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra9523.t1 vs. uniprot
Match: A0A2V3J6L3 (RRM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6L3_9FLOR) HSP 1 Score: 1308 bits (3385), Expect = 0.000e+0 Identity = 762/1113 (68.46%), Postives = 859/1113 (77.18%), Query Frame = 0
Query: 1 MVNEHAERDAEWSHDRLRDPRPGKKPRLSVP--DEPPISPRSAPXXXXXXXXXXXXXXADPPVPRILLANLDYNTTEHDIDDFFRAAGVDVKRVSLVKVSPGNRVNGNAYVYVLDLRSVDVALDLDGAEFRGRKLRVSTMPEDQRTVCVRGMPRPSSEKDVRELFRGCSIVDARSRPVKGGPPDMNTWFVDFADEDSFRRALDKDRSLPGLTICIATAQGRGTPRTREYRDNALPP---DGDRRGAPGRDDRFRXXXXXXXXXXXXXXXDRDDRPHRDDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRN---ESPKRYDRRADGDRNGDVGNGFSSRARGHSRSRSPPARFERERRYDRHEYDRRDRRGAGYDDAYDRHRDRRYSPDYXXXXXXXXXXXXXXXXXXXXXGRYERDYHRXXXDYGRXXXXXX-------------------RGGSRYDREQADPRYDRERKMDPPLDPAVTTVLTNLPFCEDRERVVDTLARTLEDLNDALRIKEITPVGRRCGACIVVFRDEDSYSKALAMNSITISTRKVNILPLEVPSVARVQKLQPGFVPEDIIDDMRRNYGVESLYIKLKQSDQLLLGIEDSRFLVRLLDIDGRPLLHSRYATVSYIPSRNHANDMGGRSRRSPHDDFSGPGGRGGXXXX----DRDGRDDEEGPPDRRRFDGGDREXXXXXXXXXXXXGDREARGYNGRE-EWRVQFVGPHDRIEERLVKNALSHIGLKELNVIPIDDCTVEVHGGNSHDKTMREVLDLPNARLPSAISLRGLTARPS----SSSL-------KKRPLSLPQPRSGHDDDGTCAKKVKRSEDTPSSGKVPTSLQAALTDRFYVSPMTPPPGETSIVKGKKGTPDPELPQICERLESLRSAITGRGSKDGDGQNYADFCGNLKSLCEPQVLKYTTRENTDPLPPVVWTGTLSKGSKAACNGYLVLRSTQGEEYVKKAVAAIPTDVKVEFRGRFDDETFDHLLTSEAVVVVVKAQEEENSGMDSTPTDKRAPRSREYFKGILQSLRNKQRLGIGRYVWEGQKYLSLCIPPNPYVFKKLRLPWRYQDFTGHDSLLLVVGPKSASQK 1070
MVNEHAERD EWSHDR+RDPRPGKKPRL+ D+P ++P P DP +PRILLANLDYNTTEHDI+DFFR AGVDV+ VSLVKVSPGNRVNGNAYVYV+D RSV +ALDLDGAEFRGRKLRVSTMPEDQRTVCVRGMPRPSSEKDVRELFRGC+I+DARSRPVKGGPPDMNTWFVDF DEDSFRRALDKDRSLPGLTICIATAQGRGTPR R++RDN PP D DRR P RDDR R XXXXXXXXXXXX DRP RDD XXXXX XXX XXXXXXXXXXXXXXX ESP+R+DRRA+GDRNGDVGNG+S R R HSRS SPP+R++R+RR DR++Y+RRDRRG YD+ YDRHRDRRYSP+Y Y+RDY R D RXXXXXX RGG RYDRE D +RK D PLDP+VTTVLTNLPFCEDRERVVDTLA TLE LNDAL+IK+I PVGRRCGAC+V+FRDE+SYS+ALAMNSITIS RKVNILPLEVPSVARVQKLQPGF PEDIIDDMRR+YGVE+LYIKL+QSDQLLLGI+DSRFLVRLLDIDGRPL+HSRYATVSYIPSRNHAND+ RSRRSP +DF+GPGGRG XXXX DRDGR DEEG PDRRR DGGDR DR+AR Y+ ++ EW+VQF GP + ++E L+K+AL+++G+ L V +DD TVEVHGGN+ + T +VLD+PN RLPS +S +GL ARP+ S SL KKRP + S + + KK+K ++D GKVPTSLQ ALTDRF+VSPMTP PG+ ++ KGK+ P+PELPQICERLE+LRSAITGRGSKD DG NY++FCGNL+SLCEPQVLKYTT ENTDPLPP+VW GTLSKG+KA C G+LVLRS+Q +E K V AIP+DVKVE RG+F+D FDHLLT EAVVVVVKA+EE G D++ D R P +REYFKGILQSLRNKQRLGIGRY+WEG+KYLSLCIPPNP VFKKLRLPWRYQDF GHDSLLLVVGPK+A QK
Sbjct: 1 MVNEHAERDPEWSHDRMRDPRPGKKPRLTDDRRDDPSLTPTRPP---------------DPSIPRILLANLDYNTTEHDIEDFFRDAGVDVREVSLVKVSPGNRVNGNAYVYVIDHRSVHIALDLDGAEFRGRKLRVSTMPEDQRTVCVRGMPRPSSEKDVRELFRGCNIIDARSRPVKGGPPDMNTWFVDFGDEDSFRRALDKDRSLPGLTICIATAQGRGTPRNRDFRDNGPPPPPNDMDRR-LPLRDDRPRDDRXXXXXXXXXXXXX--DRPPRDDXXXXXXXHXXXRLPDGRESLDRHPDRXXXXXXXXXXXXXXXXXXXXXXESPRRHDRRAEGDRNGDVGNGYS-RGRAHSRSMSPPSRYDRDRRNDRYDYERRDRRG--YDEPYDRHRDRRYSPEYYRDR------------------EYDRDYERRDRDRYRXXXXXXXXXXXXXXXXXXXXXXRDPRGG-RYDREPVDXXXXXDRKGDRPLDPSVTTVLTNLPFCEDRERVVDTLAGTLEQLNDALKIKDIIPVGRRCGACVVIFRDEESYSRALAMNSITISGRKVNILPLEVPSVARVQKLQPGFAPEDIIDDMRRSYGVETLYIKLRQSDQLLLGIDDSRFLVRLLDIDGRPLMHSRYATVSYIPSRNHANDVA-RSRRSPPNDFNGPGGRGXXXXXXXXRDRDGR-DEEGAPDRRRSDGGDRRDNGSDHARRDT--DRDARNYSSKQPEWKVQFFGPQNHVKEGLIKDALAYVGVHGLAVRSLDDYTVEVHGGNTGEGTFHKVLDIPNVRLPSPLSFKGLIARPARPPRSHSLHPDPKPQKKRPFT-----SDTGAEESSPKKMKHADDN-RHGKVPTSLQTALTDRFHVSPMTPSPGDATLSKGKRSPPNPELPQICERLETLRSAITGRGSKDSDGLNYSEFCGNLRSLCEPQVLKYTTMENTDPLPPIVWNGTLSKGNKAKCRGFLVLRSSQKDEQFKPVVEAIPSDVKVELRGKFEDGAFDHLLTPEAVVVVVKAEEEGARGTDASVADGRTPNNREYFKGILQSLRNKQRLGIGRYMWEGKKYLSLCIPPNPCVFKKLRLPWRYQDFAGHDSLLLVVGPKAAPQK 1063
BLAST of Ggra9523.t1 vs. uniprot
Match: R7QLC4 (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLC4_CHOCR) HSP 1 Score: 697 bits (1800), Expect = 3.220e-231 Identity = 527/1108 (47.56%), Postives = 656/1108 (59.21%), Query Frame = 0
Query: 21 RPGKKPRLSVPDEPPISPRSAPXXXXXXXXXXXXXXADPPVPRILLANLDYNTTEHDIDDFFRAAGVDVKRVSLVKVSPGNRVNGNAYVYVLDLRSVDVALDLDGAEFRGRKLRVSTMPEDQRTVCVRGMPRPSSEKDVRELFRGCSIVDARSRPVKGGPPDMNTWFVDFADEDSFRRALDKDRSLPGLTICIATAQGRGTPRTREYRDNALPPDGDRRGAPG-RDDRFRXXXXXXXXXXXXXXXDRDDRPHRDDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRNESPKRYDRRADGDRNGDVGNGFSSRARGHSRSRSPPARFERER---RYDR------HEYDRRDRRGAGYDDAYD---RHRDRRYSP-----------------DYXXXXXXXXXXXXXXXXXXXXXGRYERDYHRXXXDYGRXXXXXXRGGSRYDR---EQADPRYDRERKMDPPLDPAVTTVLTNLPFCEDRERVVDTLARTLEDLNDALRIKEITPVGRRCGACIVVFRDEDSYSKALAMNSITISTRKVNILPLEVPSVARVQKLQPGFVPEDIIDDMRRNYGVESLYIKLKQSDQLLLGIEDSRFLVRLLDIDGRPLLHSRYATVSYIPSRNHANDMGGRSRRSPHDDFSGPGGRGGXXXXDRDGRDDEEGPPDRRRFDGGD--------REXXXXXXXXXXXXGDREARGYNGREEWRVQFVGPHDRIEERLVKNALSHIGLKELNVIPIDDCTVEVHGGNSHDKTMREVLDLPNARLPSAISLRGLTARPSSSSLKKRPLSLPQPRSGHDDDG------TCAKKVKRSEDTP-----SSGKVPTSLQAALTDRFYVSPMTPPPGETSI-VKGKKGTPDPELPQICERLESLRSAITGRGSKDGDGQNYADFCGNLKSLCEPQVLKYTTRENTDPLPPVVWTGTLSKGSKAACNGYLVLRSTQGEEYVKKAVAAIPTDVKVEFRGRFDDETFDHLLTSEAVVVVVKAQEEENSGMDSTPTDKRA-------PRSREYFKGILQSLRNKQRLGIGRYVWEGQ--KYLSLCIPPNPYVFKKLRLPWRYQDFTGHDSLLLVVGPKS 1066
RPGKKPRLS+ + P P R+LLANL YNTTE + D FR AG +V +V LVKV P NRVNGNA+V+++D RSVD+AL LDG EF GR LRVS MPEDQRT CVRG+ S+ DV +LFRGCSIV RSRPVKGGPPD+NTWFVDF DE+SF RAL KDR+ PGL ICIATAQGRG RE PG RDD R XXXXXXXX DR RDDR XXXXXXXXXXX R R PK +RNG +GNG R SRSRSP ++R+R DR +YDR R A YD Y RDRR SP D XXXXXXXXXXXXXXXXXXXXX XXX XXXX G RYDR E + R+R+ D LDPAVT VLTNLPFCE+R++V+DTL RTLEDL DAL+I++I PVGRRCGAC+VVFR+ S ++A+ + SI+I+ RKVNILPLEVPS+ARVQKL GF EDI+DD++R+YGV +L+++ KQSDQLLLG+EDSRFLVRLLDIDGR L++SRYATVSYIPSR+H++ MGGR R S D + P GRGG DR+ RDD G P R GGD XXXXXXXXXXXX W V+ ++R + NA + G+ L+ D + + G++ M +V+ L N + G + SSS + + ++ DG + KK+K S + G +P +SPMTP PG+ ++ +K K+ DP LP +RLE +RS I R +D +NY FC +L +L EPQ L +T DP+PP VW+G++ KG + C+G+LVL S Q EE V+K ++ +P D+K+E RG+++DE F HLL E+VVV++KA +E+ DKRA PRS++ GIL+SLR KQ++GI RY GQ KY++LCIPPNPY+F+KLR+PWR +D+ GHDSLLL+VGPK+
Sbjct: 76 RPGKKPRLSL-ERPGAQGSPGAFTPSGSGRGGGSPTPLPSSSRLLLANLSYNTTEEQLVDLFRDAGAEVDKVRLVKVPPDNRVNGNAFVWLMDSRSVDIALGLDGREFLGRTLRVSDMPEDQRTACVRGLRPRSTSDDVHDLFRGCSIVGVRSRPVKGGPPDVNTWFVDFGDEESFTRALAKDRTAPGLMICIATAQGRGPRLPRER-------------IPGPRDDYDRGGPXXXXXXXXRGEYDR-----RDDRXXXXXXXXXXXXGPYDRAPPVLDVDP--------------RERMPPPK--------ERNG-MGNGGPP-PRSKSRSRSPRGGYDRDRGGSSRDRIRDPMDRDYDR--SRRADYDRGYPPRGHERDRRISPPRDDRYRERXXXXGRDRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSRGGRYDRDIREASRHAEQRDRRGDQGLDPAVTAVLTNLPFCENRQQVIDTLGRTLEDLPDALKIQDIIPVGRRCGACVVVFRESGSQNRAVQLQSISINGRKVNILPLEVPSIARVQKLSHGFSVEDILDDIQRHYGVRTLFVRTKQSDQLLLGVEDSRFLVRLLDIDGRRLVNSRYATVSYIPSRHHSDGMGGRGRPS-RDAYDDPNGRGGGYR-DRESRDDR-GSPGNERKRGGDPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXPDEAGWEVRLAELPPAADDRELLNAFENAGVTGLSFDRHDPRSGLLRCGSARLSDMDKVIGLVNRK-------EGFLFKNSSSKATVISRGGKRSHAEYESDGIEKLGHSPPKKLKTSSEVEWKAQEEMGSLPPG------QGIQISPMTPSPGDYTLPLKTKREPLDPSLPDTVKRLEKVRSNILERPPEDDSSENYESFCRSLHALREPQKLIHTMSNTIDPIPPQVWSGSVRKGPTSRCDGFLVLNSNQSEEAVRKTISELPKDIKIEHRGKWEDEAFAHLLKPESVVVILKAAKEDGK------VDKRAEKSGSAIPRSKDVLNGILRSLRGKQKMGISRYTLPGQSKKYVALCIPPNPYMFEKLRVPWRARDYAGHDSLLLIVGPKN 1116 The following BLAST results are available for this feature:
BLAST of Ggra9523.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9523.t1 ID=Ggra9523.t1|Name=Ggra9523.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1072bpback to top |