Ggra9499.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9499.t1
Unique NameGgra9499.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length231
Homology
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A2V3J5N9 (Translation machinery-associated protein 22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N9_9FLOR)

HSP 1 Score: 339 bits (870), Expect = 4.470e-116
Identity = 168/207 (81.16%), Postives = 181/207 (87.44%), Query Frame = 0
Query:   24 PAEDAVSEPVADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQTGVSPPLLPCEQPQPDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEWGVPKDAIFVVNAQKKKVKAFP 230
            P E+   +P  D RYPLSVLYC VCT P ELHEYHSR+ FEKC EWLR NAPQ+FP LFPDECAARLEAL+LAE+ GVS P    +Q   + PKVAVPIEQKTSGGKKKKTPAHI+LALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSIT+SPDNR+VIEIQGSRQQDFAQL H+EWGVPKD IF+VNAQKKKVKAFP
Sbjct:   22 PQEELPQKPERDPRYPLSVLYCPVCTFPPELHEYHSRTHFEKCKEWLRKNAPQHFPDLFPDECAARLEALRLAEEQGVSLPPTTSDQQDNNQPKVAVPIEQKTSGGKKKKTPAHIVLALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITISPDNRDVIEIQGSRQQDFAQLAHSEWGVPKDVIFIVNAQKKKVKAFP 228          
BLAST of Ggra9499.t1 vs. uniprot
Match: R7QTM7 (SUI1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTM7_CHOCR)

HSP 1 Score: 285 bits (728), Expect = 1.800e-94
Identity = 144/200 (72.00%), Postives = 169/200 (84.50%), Query Frame = 0
Query:   32 PVADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQTGVSPPLLPCEQPQP-DAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEWGVPKDAIFVVNAQKKKVKAFP 230
            P AD RYPL V YCSVCTLPAE+HEYHSR+QF+KC EWLR +AP++F     DE AARLEA+++AE++G +  +   ++ +  DA KVAVPIEQKTSGGK     A I+L LGQRKGKKQVTIVYGLDLFGIKLK+AAKAAKRKFATGSSITVS DNR+VIEIQGSRQ+DFA+LVH EWGVPK+A+++VNAQKKKVKAFP
Sbjct:   29 PQADPRYPLKVQYCSVCTLPAEVHEYHSRNQFQKCKEWLRKHAPEHFXXXXXDEIAARLEAVRIAEESGNAVVMPGADEDEDEDAIKVAVPIEQKTSGGKXXXXXAEIVLMLGQRKGKKQVTIVYGLDLFGIKLKEAAKAAKRKFATGSSITVSADNRDVIEIQGSRQEDFAELVHKEWGVPKEAVYIVNAQKKKVKAFP 228          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A1X6PK60 (SUI1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PK60_PORUM)

HSP 1 Score: 152 bits (384), Expect = 4.110e-42
Identity = 88/202 (43.56%), Postives = 123/202 (60.89%), Query Frame = 0
Query:   30 SEPVADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPD-ECAARLEALKLAEQTGVSPPLLPCEQPQPDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEWGVPKDAIFVVNAQKKKVKAFP 230
            S P A   YPL V YC +C LP E   ++S+S F KC  WL+   PQ  P++F + E  A+L A+  A   G +            A  ++ P   K +GG+ K+    I++   QRKG+KQVTIV GLDLF IKL DAAKA K+ FA+G+++  S DNR+ +EIQG+R  +FA+LV  ++ VP + IFVV ++ KK +AFP
Sbjct:   54 SGPAAPVTYPLVVEYCPMCGLPPEYCRFNSKSVFAKCKPWLKEAHPQLVPEMFGEGELEAKLAAM--AVDGGAATASANAAADAAVASSLSGPKLVKRAGGRSKRVDPEIVIHTDQRKGRKQVTIVVGLDLFDIKLSDAAKACKKAFASGATVAKSADNRDTVEIQGTRAHEFAELVRDKYKVPSELIFVVESKSKK-RAFP 252          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A7S3A8E3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8E3_9RHOD)

HSP 1 Score: 139 bits (351), Expect = 8.300e-38
Identity = 82/207 (39.61%), Postives = 112/207 (54.11%), Query Frame = 0
Query:   26 EDAVSEPVADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQTGVSPPLLPCEQPQPDAPKVAVPIEQKTSGGKKKKTPA---HIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEWGVPKDAIFVVNAQKKKVKAF 229
            E+ V+    D RYPL VLYC VC +P EL EY++   F++C  WL  N P+ +P L  +E         LAE    +              K++    +     KKKK  A    I++    RKG+KQVTIVYGLDLFG+K+ + AK  K+KF+ G+S   +PD RE +EIQG R    A  +  ++ VP+  IFVV+  K KV AF
Sbjct:    4 EEVVTVQEKDPRYPLEVLYCGVCGIPPELCEYNTPEDFDRCKPWLAANVPEMYPDLKLEEVDG-----SLAENLANA--------------KISKSSAKDGKESKKKKRVAIEPEIVIQKSARKGRKQVTIVYGLDLFGMKIPEVAKVCKKKFSCGASAVKAPDQRETLEIQGDRMTTMAAFLRDDFKVPEGRIFVVDEDKAKVPAF 191          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A5J4Z684 (Translation machinery-associated protein 22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z684_PORPP)

HSP 1 Score: 130 bits (327), Expect = 4.420e-34
Identity = 71/209 (33.97%), Postives = 111/209 (53.11%), Query Frame = 0
Query:   26 EDAVSEPVADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEA----LKLAEQTGVSPPLLPCEQPQPDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEWGVPKDAIFVVNAQKKKVKAFP 230
            + AV +  A   YPL V+YC  C LP E  E+ ++    +C  W+  N P  +P LFP      +E     L + +  G  P                     K   GKKKK    ++LAL  +KG+K  T++ G DLFGIKL +AAK  K++FA G ++T +   ++ IE+QG ++++ A+L+  ++ VP+  IF++  +K KV+AFP
Sbjct:   23 QGAVDDGTAAVSYPLHVVYCGNCGLPPEYCEFDAKEFEARCKPWIASNCPWVYPDLFPKGSGGAVEENMKQLDIQDADGEEP---------------------KEKPGKKKKGDPEVLLALSTKKGRKSATVITGADLFGIKLDEAAKMFKKRFACGCAVTKNAQQQDTIEVQGDQRREAAELLRDQYNVPEYVIFIMEDKKSKVRAFP 210          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A7N0UWR0 (Translation machinery-associated protein 22 n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UWR0_KALFE)

HSP 1 Score: 117 bits (293), Expect = 3.310e-29
Identity = 74/201 (36.82%), Postives = 105/201 (52.24%), Query Frame = 0
Query:   33 VADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFP-------DECAARLEALKLAEQTGVSPPLLPCEQPQPDAPKVAVPIEQKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEW-GVPKDAIFVVNAQKK 224
            +A+  +P+ V+YC VC+LPAE  E+     FEKC  WL  NAPQ +P L         D+ A +LE+ KL+              P    P V     ++  GGK KKK    +I+    R  +K +T V GL+LFG+KL DA+K   +KFATG+S+   P  +E I++QG    D  + +   W  VP+ AIF +   KK
Sbjct:    1 MAEKPHPVKVVYCQVCSLPAEYCEF--GPDFEKCKPWLIQNAPQLYPDLLKGAEAKEGDQLANQLESAKLSSDAT----------PSGSTPAVKQEEVKRLPGGKIKKKDKQEVIIEKSIRNRRKCITSVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEHIDVQGDIAYDIVEFITDTWPDVPEAAIFFIEDGKK 189          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A2I4GNW9 (Translation machinery-associated protein 22 n=3 Tax=Fagales TaxID=3502 RepID=A0A2I4GNW9_JUGRE)

HSP 1 Score: 117 bits (292), Expect = 4.300e-29
Identity = 75/197 (38.07%), Postives = 110/197 (55.84%), Query Frame = 0
Query:   33 VADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQ---TGVSPPLLPCEQPQPDAPKVAVPIEQKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEW-GVPKDAIFVVNAQKK 224
            +A+   P+ VLYC+VC+LPAE  E+     FEKC  WL  NAP+ +P L  +  A   EA K+++Q   TG+S      +   P APK      ++  GGK KKK    +++    R  +K +T V GL+LFG+KL DA+K   +KFATG+S+   P  +E I++QG    D  + +   W  VP+ AIF +   +K
Sbjct:    1 MAEKPQPVRVLYCAVCSLPAEYCEF--GPDFEKCKPWLIQNAPEIYPDLIKEANAK--EADKVSQQFQSTGIS-----SDGATPSAPKQEE--VKRLPGGKIKKKDKQEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITESWPDVPETAIFFIEDGRK 186          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A061GK41 (Translation machinery-associated protein 22 n=8 Tax=Malvaceae TaxID=3629 RepID=A0A061GK41_THECC)

HSP 1 Score: 117 bits (292), Expect = 5.320e-29
Identity = 77/198 (38.89%), Postives = 108/198 (54.55%), Query Frame = 0
Query:   33 VADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQ---TGVSPPLLPCEQPQPDAPKVAVPIEQKT-SGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEW-GVPKDAIFVVNAQKK 224
            +A+   P+ VLYC +C+LPAE  E+     FEKC  WL  NAP+ +P L  +  A   EA K++EQ    G+S         QP     +   E K   GGK KKK    +++    R  +K +TIV GLDLFG+KL DA+K   +KFATG+S+   P ++E I++QG    D  + +   W  VP+ AIF +   KK
Sbjct:    1 MAEKPQPVRVLYCPICSLPAEYCEF--GPDFEKCKPWLIKNAPELYPDLCKE--ANEKEAEKVSEQLQSVGISSADGAASSAQPGDTSSSKQEEVKRLPGGKIKKKEKQEVVIEKVVRNRRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTDKEQIDVQGDIAYDIVEFITETWPAVPETAIFFIEDGKK 194          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A0D2U9E8 (Translation machinery-associated protein 22 n=10 Tax=Gossypium TaxID=3633 RepID=A0A0D2U9E8_GOSRA)

HSP 1 Score: 117 bits (292), Expect = 5.460e-29
Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 0
Query:   33 VADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQ---TGVSPPLLPCEQPQPDAPKVAVPIE--QKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEW-GVPKDAIFVVNAQKK 224
            +A+   P+ VLYC +C+LPAE  E+     FEKC  WL  NAP  +P L  +  A   E  K++EQ    G+S          P    V+   E  ++  GGK KKK    +++    R  +K +TIV GLDLFGIKL DA+K   +KFATG+S+   P ++E I++QG    D  + +   W  VP+ AIF +   KK
Sbjct:    1 MAEKPQPVKVLYCPICSLPAEYCEF--GPDFEKCKPWLISNAPDLYPHLLKE--ANEKEGEKVSEQLQSVGISSAAEGAASSAPPGSTVSSKQEDVKRLPGGKIKKKEKQEVVIEKVVRNRRKCITIVKGLDLFGIKLSDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEYITETWPAVPETAIFFIEDGKK 195          
BLAST of Ggra9499.t1 vs. uniprot
Match: A0A2C9W6P7 (Translation machinery-associated protein 22 n=21 Tax=fabids TaxID=91835 RepID=A0A2C9W6P7_MANES)

HSP 1 Score: 116 bits (291), Expect = 7.110e-29
Identity = 79/199 (39.70%), Postives = 108/199 (54.27%), Query Frame = 0
Query:   33 VADDRYPLSVLYCSVCTLPAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQ---TGVSPPLLPCEQPQ--PDAPKVAVPIEQKTSGGK-KKKTPAHIILALGQRKGKKQVTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQDFAQLVHAEW-GVPKDAIFVVNAQKK 224
            +A+   PL VLYC+VC+LPAE  E+     FEKC  WL  NAP  +P L  +  A   EA K+AEQ    G+S        P     APK  V   ++  GGK KKK    +++    R  +K +T V GLDLFG+KL DA+K   +KFATG+S+   P  +E I++QG    D  + +   W  VP+ AI+ +   KK
Sbjct:    1 MAEKPQPLRVLYCAVCSLPAEYCEF--GPDFEKCKPWLIQNAPDLYPDLIKEANAK--EANKVAEQLQSAGISSSGGDGATPSGGTSAPKEEV---KRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIYFIEDGKK 192          
The following BLAST results are available for this feature:
BLAST of Ggra9499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5N94.470e-11681.16Translation machinery-associated protein 22 n=1 Ta... [more]
R7QTM71.800e-9472.00SUI1 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6PK604.110e-4243.56SUI1 domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S3A8E38.300e-3839.61Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z6844.420e-3433.97Translation machinery-associated protein 22 n=1 Ta... [more]
A0A7N0UWR03.310e-2936.82Translation machinery-associated protein 22 n=1 Ta... [more]
A0A2I4GNW94.300e-2938.07Translation machinery-associated protein 22 n=3 Ta... [more]
A0A061GK415.320e-2938.89Translation machinery-associated protein 22 n=8 Ta... [more]
A0A0D2U9E85.460e-2938.19Translation machinery-associated protein 22 n=10 T... [more]
A0A2C9W6P77.110e-2939.70Translation machinery-associated protein 22 n=21 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001950SUI1 domainPFAMPF01253SUI1coord: 137..212
e-value: 1.3E-16
score: 60.8
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 138..209
score: 17.213276
NoneNo IPR availableGENE3D3.30.780.10coord: 115..220
e-value: 7.6E-17
score: 63.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR12789DENSITY-REGULATED PROTEIN HOMOLOGcoord: 34..224
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 57..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:293354..294298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9499.t1Ggra9499.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 293354..294298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9499.t1 ID=Ggra9499.t1|Name=Ggra9499.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=231bp
MDVASPPDESAIASSSAGPSQPPPAEDAVSEPVADDRYPLSVLYCSVCTL
PAELHEYHSRSQFEKCTEWLRHNAPQYFPKLFPDECAARLEALKLAEQTG
VSPPLLPCEQPQPDAPKVAVPIEQKTSGGKKKKTPAHIILALGQRKGKKQ
VTIVYGLDLFGIKLKDAAKAAKRKFATGSSITVSPDNREVIEIQGSRQQD
FAQLVHAEWGVPKDAIFVVNAQKKKVKAFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001950SUI1
IPR036877SUI1_dom_sf